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The map label for this gene is yqgE [C]

Identifier: 218710625

GI number: 218710625

Start: 2867842

End: 2868405

Strand: Direct

Name: yqgE [C]

Synonym: VS_2679

Alternate gene names: 218710625

Gene position: 2867842-2868405 (Clockwise)

Preceding gene: 218710624

Following gene: 218710626

Centisome position: 86.92

GC content: 46.28

Gene sequence:

>564_bases
ATGAATTTAACGAACCACTTTCTGGTCGCTATGCCCGGAATGAAAGACCCATACTTTCAAAATTCGGTGATCTATCTTTG
TGAGCACAATGACGAAGGTGCGATGGGTTTGATGATCAACGCTCCTATCGATGTCACTGTTGGCAGTATGCTTAAGCAAG
TTGAGGTTGATTCTGAACAGCCGAAACCCAACCAAGCAAGCCTTGATAAGCCAGTACTTAATGGTGGGCCAGTCGCAGAA
GATCGTGGGTTTATTTTGCACAAACCCAAAGGCAGTTATCAATCCAGCATCAACATGACGGATCAAATCTCGGTAACAAC
CTCGAAAGATATTCTAATGGTGTTAGGGACAGAAGATGAACCTATGCATTATCTGGTCGCGCTTGGTTATGCAGGATGGG
AACCAGGACAACTGGAAATCGAGCTGACTGAAAACTCATGGCTAACCGTTGAAGCCGATCCTAAGGTTATCTTCAACACG
CCAATTTCGGATCGCTGGAAAGTTGCCGTGCAAATGTTAGGCATCAATGCGGCTCAGCTTTCAGCAGACGCTGGCCACGC
ATAG

Upstream 100 bases:

>100_bases
CCTTAGCTATTCGAAAACACAAAAATATCTAGGCAAAGAACAATGAGCGGCTTTACGCCGCTCTTTTTCCTTTACGGGGA
ACACACTGGCAGGAGGCTCT

Downstream 100 bases:

>100_bases
TCCGACTCAGCTCAATAAAATAAACACTCTCAAACACAGATTAATTTGGAAGCCCCATGTCACGAACAATTATGGCATTT
GACTACGGTACAAAAAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNLTNHFLVAMPGMKDPYFQNSVIYLCEHNDEGAMGLMINAPIDVTVGSMLKQVEVDSEQPKPNQASLDKPVLNGGPVAE
DRGFILHKPKGSYQSSINMTDQISVTTSKDILMVLGTEDEPMHYLVALGYAGWEPGQLEIELTENSWLTVEADPKVIFNT
PISDRWKVAVQMLGINAAQLSADAGHA

Sequences:

>Translated_187_residues
MNLTNHFLVAMPGMKDPYFQNSVIYLCEHNDEGAMGLMINAPIDVTVGSMLKQVEVDSEQPKPNQASLDKPVLNGGPVAE
DRGFILHKPKGSYQSSINMTDQISVTTSKDILMVLGTEDEPMHYLVALGYAGWEPGQLEIELTENSWLTVEADPKVIFNT
PISDRWKVAVQMLGINAAQLSADAGHA
>Mature_187_residues
MNLTNHFLVAMPGMKDPYFQNSVIYLCEHNDEGAMGLMINAPIDVTVGSMLKQVEVDSEQPKPNQASLDKPVLNGGPVAE
DRGFILHKPKGSYQSSINMTDQISVTTSKDILMVLGTEDEPMHYLVALGYAGWEPGQLEIELTENSWLTVEADPKVIFNT
PISDRWKVAVQMLGINAAQLSADAGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=188, Percent_Identity=48.936170212766, Blast_Score=207, Evalue=3e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2679_VIBSL (B7VKQ2)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002418246.1
- ProteinModelPortal:   B7VKQ2
- GeneID:   7162194
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_2679
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- ProtClustDB:   PRK00228
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 20457; Mature: 20457

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTNHFLVAMPGMKDPYFQNSVIYLCEHNDEGAMGLMINAPIDVTVGSMLKQVEVDSEQ
CCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEHHHHHHHHCCCCCC
PKPNQASLDKPVLNGGPVAEDRGFILHKPKGSYQSSINMTDQISVTTSKDILMVLGTEDE
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCCC
PMHYLVALGYAGWEPGQLEIELTENSWLTVEADPKVIFNTPISDRWKVAVQMLGINAAQL
CEEEEEEEECCCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCCCEEEEEEECCCHHHC
SADAGHA
CCCCCCC
>Mature Secondary Structure
MNLTNHFLVAMPGMKDPYFQNSVIYLCEHNDEGAMGLMINAPIDVTVGSMLKQVEVDSEQ
CCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEHHHHHHHHCCCCCC
PKPNQASLDKPVLNGGPVAEDRGFILHKPKGSYQSSINMTDQISVTTSKDILMVLGTEDE
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCCC
PMHYLVALGYAGWEPGQLEIELTENSWLTVEADPKVIFNTPISDRWKVAVQMLGINAAQL
CEEEEEEEECCCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCCCEEEEEEECCCHHHC
SADAGHA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA