| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is cbiG [H]
Identifier: 218710611
GI number: 218710611
Start: 2851840
End: 2853444
Strand: Direct
Name: cbiG [H]
Synonym: VS_2665
Alternate gene names: 218710611
Gene position: 2851840-2853444 (Clockwise)
Preceding gene: 218710610
Following gene: 218710612
Centisome position: 86.44
GC content: 46.04
Gene sequence:
>1605_bases ATGAAAATAGCCATTTATGCCATCACGCTACACGGAGCAAGGCAAGCCAAACGCTTAGCTAAAACGTTTCCGTTTGCTGA TGTCTTTATTGCACCAGTTGGACAAGAAGAATACCCAGAAGCCGATGAGTTAACCCTGCCGCTTTCTGGTTTTCTTCCTC CTCAATTTAAGCAATATGATCACCATATCTGCTTTTTTGCTGCGGGCATTGTCAGCCGAATGATCGGCCCTTTGCTAGAA GACAAACGCACCGACCCCGGCGTGATCTGCATTGACGATCACGGCCAATTCGTGATCCCTATGTTATCTGGACATCGCGG TGGCGCAAATGGGATCGCGTTACAAGTCTCACAAGCACTCAACGCGACTCCTGTAATCACCACCGCTTCTGACGCTGCCG GCAGTTTGTCGGTGGATATGCTCGGATCGCCATTTGGTTGGACGCTTGATCCACAATGCGAACCCGCGATCACCGCCACC AGCGCAGCAGTTGTAAATGAAAAACGCATTCTAATAGTGCAGCACGCTGGCGAACAGAACTGGTGGCAGAACAAACGTTC CATGCCAAGACACATCATTACCCACCCTGCACTAAGCGATACAGACCTTTCTCAAATCAGTACTGATGATTGGGATGGTT TAGTTCTGATTTCAGATGAAGCACAACCAAAAAGTTACGCCGACTTTAAAAATAAAACCGTACTGTGGCGACCAAAATCG CTTGTGCTTGGAATAGGCTGTGACCGCAATACTCCTTTGCATGTATTGAAAGCAGGTATCGATGTTTTCCTGACTGAATA TAACCTAGCAAAAGCCAGTGTTTCAGCTTTCGCCAGTATCGCTTTAAAAGCGGATGAAAAAGGTATTTTAGAACTCTCGT CTGAAAGCCAAATTCCTTTCCACACTTATTCAGCCGAGCAACTCGACGGCGTTGAAGGGATTGAAAACCCATCAGAATAC GTAAAAAAAATTACGGGCGTATCATCGGTTTCTGAAGCAGCCGCGCTAAAGCACGCTAAGCGAGATCAACTATTGGTACC TAAGTGGAAGTTCAAACAAGACGGTTTCAACATGACTTTATCTTGTACTCGCATCGAATACGATGAACCCCTCGCCAAGA AGAAGTGGAAAAACTGGCTAGATGAAAACGTCAAAATCAACCTTCACGGTAATGAAGTGGTAGATGGTTTTCAGTGTAAG CCTAAGCATGTCGATTTAAACCGCCCGATGCTGTACCACCGCCATCACGTATTGCTATGTGAAGGTGGCCGCTGCGCGAA AGAAGGCAGTAAAAACCTTGCACACGATCTTAGACAGGTACTTAAAGCGCTCAATTTTTCCGACGGTGAACAGCGCATCA AGATAAGCCGTACACACTGTGCGGGCACCTGCAGAAACCGCGCTGCAATGGTGATTTACGAACGTTTACTAGAACATGAA ACACCTGTTAACAACGGGCTTTGGGTTCGAGGTATCGAAGAATTTACCGAGCAAGACTGGAAAGATTTGTTCACAAATTT AGTCGAACGGAAATCATTAAAAGCTTATTTAGATCCTAAGTTTATCGCACCAATTGAAAATGCAGACGGCACCACTGAGC TTTAG
Upstream 100 bases:
>100_bases CTCGTCGTGGCGTACTACGTGGTACTAATGAATCAAAGAAATGTGCCGTTCTTGATGATGGTAAAGATGACATCAATAAA ACTAATAGCGGTAAAGCGTA
Downstream 100 bases:
>100_bases GAACATAGTAGGCCAAATACTTTGCAAGCTATGAACATGATATTTCAAAGCTCACTTTAACCTCATTACCAACATGAGAT AACCCGTTTATCTTGTGATA
Product: cobalamin biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MKIAIYAITLHGARQAKRLAKTFPFADVFIAPVGQEEYPEADELTLPLSGFLPPQFKQYDHHICFFAAGIVSRMIGPLLE DKRTDPGVICIDDHGQFVIPMLSGHRGGANGIALQVSQALNATPVITTASDAAGSLSVDMLGSPFGWTLDPQCEPAITAT SAAVVNEKRILIVQHAGEQNWWQNKRSMPRHIITHPALSDTDLSQISTDDWDGLVLISDEAQPKSYADFKNKTVLWRPKS LVLGIGCDRNTPLHVLKAGIDVFLTEYNLAKASVSAFASIALKADEKGILELSSESQIPFHTYSAEQLDGVEGIENPSEY VKKITGVSSVSEAAALKHAKRDQLLVPKWKFKQDGFNMTLSCTRIEYDEPLAKKKWKNWLDENVKINLHGNEVVDGFQCK PKHVDLNRPMLYHRHHVLLCEGGRCAKEGSKNLAHDLRQVLKALNFSDGEQRIKISRTHCAGTCRNRAAMVIYERLLEHE TPVNNGLWVRGIEEFTEQDWKDLFTNLVERKSLKAYLDPKFIAPIENADGTTEL
Sequences:
>Translated_534_residues MKIAIYAITLHGARQAKRLAKTFPFADVFIAPVGQEEYPEADELTLPLSGFLPPQFKQYDHHICFFAAGIVSRMIGPLLE DKRTDPGVICIDDHGQFVIPMLSGHRGGANGIALQVSQALNATPVITTASDAAGSLSVDMLGSPFGWTLDPQCEPAITAT SAAVVNEKRILIVQHAGEQNWWQNKRSMPRHIITHPALSDTDLSQISTDDWDGLVLISDEAQPKSYADFKNKTVLWRPKS LVLGIGCDRNTPLHVLKAGIDVFLTEYNLAKASVSAFASIALKADEKGILELSSESQIPFHTYSAEQLDGVEGIENPSEY VKKITGVSSVSEAAALKHAKRDQLLVPKWKFKQDGFNMTLSCTRIEYDEPLAKKKWKNWLDENVKINLHGNEVVDGFQCK PKHVDLNRPMLYHRHHVLLCEGGRCAKEGSKNLAHDLRQVLKALNFSDGEQRIKISRTHCAGTCRNRAAMVIYERLLEHE TPVNNGLWVRGIEEFTEQDWKDLFTNLVERKSLKAYLDPKFIAPIENADGTTEL >Mature_534_residues MKIAIYAITLHGARQAKRLAKTFPFADVFIAPVGQEEYPEADELTLPLSGFLPPQFKQYDHHICFFAAGIVSRMIGPLLE DKRTDPGVICIDDHGQFVIPMLSGHRGGANGIALQVSQALNATPVITTASDAAGSLSVDMLGSPFGWTLDPQCEPAITAT SAAVVNEKRILIVQHAGEQNWWQNKRSMPRHIITHPALSDTDLSQISTDDWDGLVLISDEAQPKSYADFKNKTVLWRPKS LVLGIGCDRNTPLHVLKAGIDVFLTEYNLAKASVSAFASIALKADEKGILELSSESQIPFHTYSAEQLDGVEGIENPSEY VKKITGVSSVSEAAALKHAKRDQLLVPKWKFKQDGFNMTLSCTRIEYDEPLAKKKWKNWLDENVKINLHGNEVVDGFQCK PKHVDLNRPMLYHRHHVLLCEGGRCAKEGSKNLAHDLRQVLKALNFSDGEQRIKISRTHCAGTCRNRAAMVIYERLLEHE TPVNNGLWVRGIEEFTEQDWKDLFTNLVERKSLKAYLDPKFIAPIENADGTTEL
Specific function: Unknown
COG id: COG2073
COG function: function code H; Cobalamin biosynthesis protein CbiG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021745 - InterPro: IPR021744 - InterPro: IPR002750 [H]
Pfam domain/function: PF01890 CbiG; PF11761 CbiG_mid; PF11760 CbiG_N [H]
EC number: NA
Molecular weight: Translated: 59465; Mature: 59465
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIYAITLHGARQAKRLAKTFPFADVFIAPVGQEEYPEADELTLPLSGFLPPQFKQYD CEEEEEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCHHHHCC HHICFFAAGIVSRMIGPLLEDKRTDPGVICIDDHGQFVIPMLSGHRGGANGIALQVSQAL CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEHHC NATPVITTASDAAGSLSVDMLGSPFGWTLDPQCEPAITATSAAVVNEKRILIVQHAGEQN CCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEECHHHEECCCEEEEEEECCCCC WWQNKRSMPRHIITHPALSDTDLSQISTDDWDGLVLISDEAQPKSYADFKNKTVLWRPKS HHHHHHCCCHHHCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHCCCCEEEECCCE LVLGIGCDRNTPLHVLKAGIDVFLTEYNLAKASVSAFASIALKADEKGILELSSESQIPF EEEEECCCCCCCHHHHHHCCEEEEEECCHHHHHHHHHHHEEEECCCCCEEEECCCCCCCE HTYSAEQLDGVEGIENPSEYVKKITGVSSVSEAAALKHAKRDQLLVPKWKFKQDGFNMTL EECCHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEE SCTRIEYDEPLAKKKWKNWLDENVKINLHGNEVVDGFQCKPKHVDLNRPMLYHRHHVLLC EEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEE EGGRCAKEGSKNLAHDLRQVLKALNFSDGEQRIKISRTHCAGTCRNRAAMVIYERLLEHE CCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCHHHCCCHHHHHHHHHHHHC TPVNNGLWVRGIEEFTEQDWKDLFTNLVERKSLKAYLDPKFIAPIENADGTTEL CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCC >Mature Secondary Structure MKIAIYAITLHGARQAKRLAKTFPFADVFIAPVGQEEYPEADELTLPLSGFLPPQFKQYD CEEEEEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCHHHHCC HHICFFAAGIVSRMIGPLLEDKRTDPGVICIDDHGQFVIPMLSGHRGGANGIALQVSQAL CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEHHC NATPVITTASDAAGSLSVDMLGSPFGWTLDPQCEPAITATSAAVVNEKRILIVQHAGEQN CCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEECHHHEECCCEEEEEEECCCCC WWQNKRSMPRHIITHPALSDTDLSQISTDDWDGLVLISDEAQPKSYADFKNKTVLWRPKS HHHHHHCCCHHHCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHCCCCEEEECCCE LVLGIGCDRNTPLHVLKAGIDVFLTEYNLAKASVSAFASIALKADEKGILELSSESQIPF EEEEECCCCCCCHHHHHHCCEEEEEECCHHHHHHHHHHHEEEECCCCCEEEECCCCCCCE HTYSAEQLDGVEGIENPSEYVKKITGVSSVSEAAALKHAKRDQLLVPKWKFKQDGFNMTL EECCHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEE SCTRIEYDEPLAKKKWKNWLDENVKINLHGNEVVDGFQCKPKHVDLNRPMLYHRHHVLLC EEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEE EGGRCAKEGSKNLAHDLRQVLKALNFSDGEQRIKISRTHCAGTCRNRAAMVIYERLLEHE CCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCHHHCCCHHHHHHHHHHHHC TPVNNGLWVRGIEEFTEQDWKDLFTNLVERKSLKAYLDPKFIAPIENADGTTEL CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]