Click here to switch to the map view.

The map label for this gene is ygfB [C]

Identifier: 218710585

GI number: 218710585

Start: 2822792

End: 2823367

Strand: Reverse

Name: ygfB [C]

Synonym: VS_2635

Alternate gene names: 218710585

Gene position: 2823367-2822792 (Counterclockwise)

Preceding gene: 218710590

Following gene: 218710584

Centisome position: 85.57

GC content: 46.53

Gene sequence:

>576_bases
ATGAGCGAAACTACTTTACCTGACTACCTAACGGTTGCGACTGAACTTCAATCGGCAAGCCTAGCCGTAAACCCTGCTGA
GATGCATGGTTTATTAACGGGTATGTTGAGCGGAGGCTTAAACCTAGCAGATAAAAGCTGGCAACCACTTATCTTTGATT
ACACCAATGAAGGCATGGGGTGGCCAGATCGCGCATTAACGTTAGCGGAAGCGACATTAAAGGTGACGACCAGCGAAATC
ACAGGTTCAGGCATGGAACTGTCTATGTTGCTGCCTGATGAAGACGCAAGCGCAAGCTTGTTTGATTTGGCTGATGGTGT
GTCAGATTGGATTAACCACTTTATTTCTGGTTTAGGCTTGGTTGGCGCTCAATTGAATAAAGCGTCTGACGGTACCAAAG
AAGCATTAGCTGATCTTGAAGAGATGGCAAAGCTAGGCATTGACGAAGACGATGATATGGAAGAGCAAGCGCAGCTTCTA
GAGCACGTTATTGAACACGTAAAAGCGTGTGCACTAACGATTCATGCTGAATTCGGTGCTCGCCCATCTGAAGATGCGGC
TCCAACCATTCATTAA

Upstream 100 bases:

>100_bases
TCAGTCATCCTTCAATTGCTCAGGATCGACGCTTACCAGAATTGGGGTGAAGTGGTACGATTATACTATCGATATAAAGA
ATAACTGAGCGAGCTATCTG

Downstream 100 bases:

>100_bases
TCCGCTTGTCGGTTTGAGGTTATAATGGCTCAGTATGATGTTGTAATTGCTGGTGGCGCAATGGCGGGGGCGACCTTAGC
CCTTGCTCTGAATCACCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSETTLPDYLTVATELQSASLAVNPAEMHGLLTGMLSGGLNLADKSWQPLIFDYTNEGMGWPDRALTLAEATLKVTTSEI
TGSGMELSMLLPDEDASASLFDLADGVSDWINHFISGLGLVGAQLNKASDGTKEALADLEEMAKLGIDEDDDMEEQAQLL
EHVIEHVKACALTIHAEFGARPSEDAAPTIH

Sequences:

>Translated_191_residues
MSETTLPDYLTVATELQSASLAVNPAEMHGLLTGMLSGGLNLADKSWQPLIFDYTNEGMGWPDRALTLAEATLKVTTSEI
TGSGMELSMLLPDEDASASLFDLADGVSDWINHFISGLGLVGAQLNKASDGTKEALADLEEMAKLGIDEDDDMEEQAQLL
EHVIEHVKACALTIHAEFGARPSEDAAPTIH
>Mature_190_residues
SETTLPDYLTVATELQSASLAVNPAEMHGLLTGMLSGGLNLADKSWQPLIFDYTNEGMGWPDRALTLAEATLKVTTSEIT
GSGMELSMLLPDEDASASLFDLADGVSDWINHFISGLGLVGAQLNKASDGTKEALADLEEMAKLGIDEDDDMEEQAQLLE
HVIEHVKACALTIHAEFGARPSEDAAPTIH

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family

Homologues:

Organism=Escherichia coli, GI87082182, Length=195, Percent_Identity=39.4871794871795, Blast_Score=114, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2635_VIBSL (B7VK95)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002418206.1
- ProteinModelPortal:   B7VK95
- SMR:   B7VK95
- GeneID:   7162154
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_2635
- HOGENOM:   HBG701093
- OMA:   ELMNDGQ
- ProtClustDB:   PRK01736
- HAMAP:   MF_00346
- InterPro:   IPR011978
- TIGRFAMs:   TIGR02292

Pfam domain/function: PF03695 UPF0149; SSF101327 YgfB_YecA

EC number: NA

Molecular weight: Translated: 20385; Mature: 20254

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETTLPDYLTVATELQSASLAVNPAEMHGLLTGMLSGGLNLADKSWQPLIFDYTNEGMG
CCCCCCCHHHHHHHHHHHCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC
WPDRALTLAEATLKVTTSEITGSGMELSMLLPDEDASASLFDLADGVSDWINHFISGLGL
CCHHHHHHHHHHHEEEHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VGAQLNKASDGTKEALADLEEMAKLGIDEDDDMEEQAQLLEHVIEHVKACALTIHAEFGA
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCC
RPSEDAAPTIH
CCCCCCCCCCC
>Mature Secondary Structure 
SETTLPDYLTVATELQSASLAVNPAEMHGLLTGMLSGGLNLADKSWQPLIFDYTNEGMG
CCCCCCHHHHHHHHHHHCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC
WPDRALTLAEATLKVTTSEITGSGMELSMLLPDEDASASLFDLADGVSDWINHFISGLGL
CCHHHHHHHHHHHEEEHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VGAQLNKASDGTKEALADLEEMAKLGIDEDDDMEEQAQLLEHVIEHVKACALTIHAEFGA
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCC
RPSEDAAPTIH
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA