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The map label for this gene is rseB [H]

Identifier: 218710573

GI number: 218710573

Start: 2812944

End: 2813906

Strand: Reverse

Name: rseB [H]

Synonym: VS_2623

Alternate gene names: 218710573

Gene position: 2813906-2812944 (Counterclockwise)

Preceding gene: 218710574

Following gene: 218710572

Centisome position: 85.29

GC content: 46.83

Gene sequence:

>963_bases
ATGAAGAAAATCCTGGTCAGTGCACTGACACTGTTCAGCTTGATGTCTCCAACAGCCTTTGCAGAGGAAACCACTGCAAA
GGCCTTGTTACATCAAATGAACGAGGCCAGTCAGCATCTAAATTACGAACTCTCCTACATATTGATAAAGAAGAGCAGTA
TTGAACCTCTGCTTTATCGTCATGCAGTTAACGACGACCAACAACTTGCACACCTTGTTTATCTAAGCGGCCCTGTTCGT
GAGGTTATTCGACGTGGCAATGAAGTTAGCTACATCGAACCGGGTACAGAGCCATTTACTATTCAGTCTGGCAGCATGGT
TGCACCTGTCATACCGATGATTAATCGAGATATCGATTCTCTCAACCAATACTACGATTTTGTAAAAGTTGGGCGTTCTC
GTGAGGCGGGCAGTACCACGCAAGTATTACGCGTAGTGCCGAAAGACGGCCTTCGATACTCTTATGTGGTTTGGGTCGAC
GAGAAAACCAACCTTCCTTTGCGTGCCGATCTTTTGGATCGTGATGGCGAAGTGCTTGAGCAGTACCGCACTATCTCTTA
TGTCGTGAACGATAAAATTGCAGAAGCAATGGGCGGCTTGAATCAAGCTAAATTGCCGAAGGTTTTGTCATTGCCAGAAG
GCTTGGTGAGTGAGACCGACTGGCAAGCCTCGTGGGTGCCAGAAGGATTTAAATCGAAAGAACTCAGCCGTTACCAAATG
GCTGCGACCGAGAAAATGGTTGAAAGCCAGCTTTTCAGTGATGGATTATTTAGCTTTTCGGTTTATATCGCCGATAAAGA
CGAACATTCATTGAAAGGACAGCTGGTACGCCAAGGGCGAAGAACCTTGCACAGCTTAGTGATTGGCGACAAAGAAATCT
CTGTGGTTGGTGATATTCCGCCAGCAACGGCCAAGCGTATCGCTCAATCCGTCACGTTCAATAAACCGGCACCAGCGCAA
TGA

Upstream 100 bases:

>100_bases
GCAAACGCGTTCATGCATTGTTAGAAGATTATGAGCTACAACTAAGATTAAACAGTGATGCATCGCCAATGGAAGATGCA
CACCTAGAATCGGATATTGA

Downstream 100 bases:

>100_bases
TGACTGCGTTGGCAACCGTTAGCTCAGTCGAACAAAAAGGTAAGCAATATTTTGTTCAACTGAGTTGCGAACAACAAACC
AGTTGCAGCAGCTGCTCATC

Product: periplasmic negative regulator of sigmaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKKILVSALTLFSLMSPTAFAEETTAKALLHQMNEASQHLNYELSYILIKKSSIEPLLYRHAVNDDQQLAHLVYLSGPVR
EVIRRGNEVSYIEPGTEPFTIQSGSMVAPVIPMINRDIDSLNQYYDFVKVGRSREAGSTTQVLRVVPKDGLRYSYVVWVD
EKTNLPLRADLLDRDGEVLEQYRTISYVVNDKIAEAMGGLNQAKLPKVLSLPEGLVSETDWQASWVPEGFKSKELSRYQM
AATEKMVESQLFSDGLFSFSVYIADKDEHSLKGQLVRQGRRTLHSLVIGDKEISVVGDIPPATAKRIAQSVTFNKPAPAQ

Sequences:

>Translated_320_residues
MKKILVSALTLFSLMSPTAFAEETTAKALLHQMNEASQHLNYELSYILIKKSSIEPLLYRHAVNDDQQLAHLVYLSGPVR
EVIRRGNEVSYIEPGTEPFTIQSGSMVAPVIPMINRDIDSLNQYYDFVKVGRSREAGSTTQVLRVVPKDGLRYSYVVWVD
EKTNLPLRADLLDRDGEVLEQYRTISYVVNDKIAEAMGGLNQAKLPKVLSLPEGLVSETDWQASWVPEGFKSKELSRYQM
AATEKMVESQLFSDGLFSFSVYIADKDEHSLKGQLVRQGRRTLHSLVIGDKEISVVGDIPPATAKRIAQSVTFNKPAPAQ
>Mature_320_residues
MKKILVSALTLFSLMSPTAFAEETTAKALLHQMNEASQHLNYELSYILIKKSSIEPLLYRHAVNDDQQLAHLVYLSGPVR
EVIRRGNEVSYIEPGTEPFTIQSGSMVAPVIPMINRDIDSLNQYYDFVKVGRSREAGSTTQVLRVVPKDGLRYSYVVWVD
EKTNLPLRADLLDRDGEVLEQYRTISYVVNDKIAEAMGGLNQAKLPKVLSLPEGLVSETDWQASWVPEGFKSKELSRYQM
AATEKMVESQLFSDGLFSFSVYIADKDEHSLKGQLVRQGRRTLHSLVIGDKEISVVGDIPPATAKRIAQSVTFNKPAPAQ

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=311, Percent_Identity=48.2315112540193, Blast_Score=291, Evalue=4e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 35820; Mature: 35820

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILVSALTLFSLMSPTAFAEETTAKALLHQMNEASQHLNYELSYILIKKSSIEPLLYR
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHH
HAVNDDQQLAHLVYLSGPVREVIRRGNEVSYIEPGTEPFTIQSGSMVAPVIPMINRDIDS
HHCCCHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHCCCHHH
LNQYYDFVKVGRSREAGSTTQVLRVVPKDGLRYSYVVWVDEKTNLPLRADLLDRDGEVLE
HHHHHHHHHHCCCCCCCCHHHHHEECCCCCCEEEEEEEEECCCCCCEEHHHHCCCHHHHH
QYRTISYVVNDKIAEAMGGLNQAKLPKVLSLPEGLVSETDWQASWVPEGFKSKELSRYQM
HHHHHHHHHHHHHHHHHCCCCHHCCCHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHH
AATEKMVESQLFSDGLFSFSVYIADKDEHSLKGQLVRQGRRTLHSLVIGDKEISVVGDIP
HHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
PATAKRIAQSVTFNKPAPAQ
CHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKILVSALTLFSLMSPTAFAEETTAKALLHQMNEASQHLNYELSYILIKKSSIEPLLYR
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHH
HAVNDDQQLAHLVYLSGPVREVIRRGNEVSYIEPGTEPFTIQSGSMVAPVIPMINRDIDS
HHCCCHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHCCCHHH
LNQYYDFVKVGRSREAGSTTQVLRVVPKDGLRYSYVVWVDEKTNLPLRADLLDRDGEVLE
HHHHHHHHHHCCCCCCCCHHHHHEECCCCCCEEEEEEEEECCCCCCEEHHHHCCCHHHHH
QYRTISYVVNDKIAEAMGGLNQAKLPKVLSLPEGLVSETDWQASWVPEGFKSKELSRYQM
HHHHHHHHHHHHHHHHHCCCCHHCCCHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHH
AATEKMVESQLFSDGLFSFSVYIADKDEHSLKGQLVRQGRRTLHSLVIGDKEISVVGDIP
HHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
PATAKRIAQSVTFNKPAPAQ
CHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]