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The map label for this gene is rseC [C]

Identifier: 218710572

GI number: 218710572

Start: 2812477

End: 2812947

Strand: Reverse

Name: rseC [C]

Synonym: VS_2622

Alternate gene names: 218710572

Gene position: 2812947-2812477 (Counterclockwise)

Preceding gene: 218710573

Following gene: 218710571

Centisome position: 85.26

GC content: 44.37

Gene sequence:

>471_bases
ATGATGACTGCGTTGGCAACCGTTAGCTCAGTCGAACAAAAAGGTAAGCAATATTTTGTTCAACTGAGTTGCGAACAACA
AACCAGTTGCAGCAGCTGCTCATCTCAAAAAAGCTGCGGAACGGGTATTGTGACCAAGGCTGTTGGCAATAAATCCTTGT
TTTGGCAGCTTAAAACCCAAAGCCTAGTCAAAGCAGGCCAGATCGTAGAAATTGGCTTTCCAGAAAAAAGCCTACTTCAG
TCTGCGGCTATTGTTTATCTTATCCCGCTTTTCATGTTGATGGTTGGTGCTGGTTTTGGACAACTCTTGTTACAACCCTT
ACTCCAAGGGGGCGAGGGCATTGTTATCTTAACTGCAGCGCTGTTTACTGCTGGTGGTATTGGTTTGGCGAAGCGCTTAG
CTAAACCAATGGAAGACAAATCCAAGCAAGAAGTTGTCTTGATTAGAATCCTAGGCAAGTCTCTCATCTAA

Upstream 100 bases:

>100_bases
TGATTGGCGACAAAGAAATCTCTGTGGTTGGTGATATTCCGCCAGCAACGGCCAAGCGTATCGCTCAATCCGTCACGTTC
AATAAACCGGCACCAGCGCA

Downstream 100 bases:

>100_bases
TTTATGATGCTTATTGCCCTTAAATTGGGTAGAATCTGCCAACTTGATTGAAATGCCGCCACCAATGCTGACTGTAGATT
GGACGCGTTGCGGCTTTCTT

Product: sigma-E factor regulatory protein RseC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MMTALATVSSVEQKGKQYFVQLSCEQQTSCSSCSSQKSCGTGIVTKAVGNKSLFWQLKTQSLVKAGQIVEIGFPEKSLLQ
SAAIVYLIPLFMLMVGAGFGQLLLQPLLQGGEGIVILTAALFTAGGIGLAKRLAKPMEDKSKQEVVLIRILGKSLI

Sequences:

>Translated_156_residues
MMTALATVSSVEQKGKQYFVQLSCEQQTSCSSCSSQKSCGTGIVTKAVGNKSLFWQLKTQSLVKAGQIVEIGFPEKSLLQ
SAAIVYLIPLFMLMVGAGFGQLLLQPLLQGGEGIVILTAALFTAGGIGLAKRLAKPMEDKSKQEVVLIRILGKSLI
>Mature_156_residues
MMTALATVSSVEQKGKQYFVQLSCEQQTSCSSCSSQKSCGTGIVTKAVGNKSLFWQLKTQSLVKAGQIVEIGFPEKSLLQ
SAAIVYLIPLFMLMVGAGFGQLLLQPLLQGGEGIVILTAALFTAGGIGLAKRLAKPMEDKSKQEVVLIRILGKSLI

Specific function: Seems To Modulate The Activity Of Rpoe (Sigma-E). [C]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007359 [H]

Pfam domain/function: PF04246 RseC_MucC [H]

EC number: NA

Molecular weight: Translated: 16581; Mature: 16581

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTALATVSSVEQKGKQYFVQLSCEQQTSCSSCSSQKSCGTGIVTKAVGNKSLFWQLKTQ
CCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCCCCCCCHHHHHCCCCEEEEEEHHH
SLVKAGQIVEIGFPEKSLLQSAAIVYLIPLFMLMVGAGFGQLLLQPLLQGGEGIVILTAA
HHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEHHHH
LFTAGGIGLAKRLAKPMEDKSKQEVVLIRILGKSLI
HHHCCCHHHHHHHHCCCCCCCHHHHHHHEEHHHHCC
>Mature Secondary Structure
MMTALATVSSVEQKGKQYFVQLSCEQQTSCSSCSSQKSCGTGIVTKAVGNKSLFWQLKTQ
CCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCCCCCCCHHHHHCCCCEEEEEEHHH
SLVKAGQIVEIGFPEKSLLQSAAIVYLIPLFMLMVGAGFGQLLLQPLLQGGEGIVILTAA
HHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEHHHH
LFTAGGIGLAKRLAKPMEDKSKQEVVLIRILGKSLI
HHHCCCHHHHHHHHCCCCCCCHHHHHHHEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]