| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is pyrG [H]
Identifier: 218710559
GI number: 218710559
Start: 2796066
End: 2797706
Strand: Reverse
Name: pyrG [H]
Synonym: VS_2609
Alternate gene names: 218710559
Gene position: 2797706-2796066 (Counterclockwise)
Preceding gene: 218710560
Following gene: 218710558
Centisome position: 84.8
GC content: 46.01
Gene sequence:
>1641_bases ATGACGACAAATTACATTTTTGTTACTGGCGGGGTTGTATCCTCTCTAGGTAAAGGTATTGCAGCAGCATCTCTTGCGGC TATTTTAGAAGCTCGTGGTCTTAAAGTGACTATGATGAAGCTTGACCCTTACATCAACGTTGATCCAGGCACAATGAGCC CGACTCAACACGGTGAAGTGTTCGTTACGGAAGATGGCGCTGAAACTGACCTTGACCTTGGTCACTACGAGCGATTCATT CGCACCAAGATGACTAAGCGTAACAACTTCACTGCAGGTCGTGTTTACTCAGACGTACTCGCTAAAGAGCGTCGCGGTGA TTACCTAGGTGCAACTATTCAGGTTATCCCGCACATCACTAACTCTATCAAAGAACGTGTAATTTCTGGCGCAGCTGGCC ACGATATCGCGCTTGTTGAAGTTGGTGGTACGGTTGGTGATATCGAATCTCTACCATTCATGGAAGCGATTCGTCAGCTA GCAGTAGAGCTAGGCCGTGAACGCGCAATGTTCATGCACCTTACTCTAGTGCCATACCTAGCAGCTGCGGGCGAAGTGAA AACTAAGCCAACGCAACACTCTGTAAAAGAGCTGCTGTCTATTGGTATTCAGCCAGACATTCTAGTTTGTCGTTCAGACC GCAACATTCCTTCGAACGAGCGTAAGAAAATTGCTCTGTTCTGTAATGTGCAAGAAAATGCAGTTATTTCTATGCGCGAT GTTGACTCTATCTACAAGATCCCTCAGCTTATTAAAGCTCAAGGCACTGATGAACTTGTATGTAAGCGTTTCGGCATCAC AGCTCCAGAAGCAGACCTGTCTGAATGGGAACAAGTAATTTACGAAGAAGCTAACCCAACGGGTGAAGTGACGATTGGTA TGGTTGGTAAGTACATTGAACTACCAGACGCATACAAATCAGTAAATGAAGCGCTAAAACACGCGGGCTTGAAAAATCGC CTAAGCGTTAATATTAAATACGTAGATTCACAAGACGTTGAGTCTCGTGGCGTAGAAGTTTTAGAAGGCCTAGATGCAAT CCTAGTTCCTGGTGGCTTTGGTGATCGTGGTGTTGAAGGCAAGATTCTTGCTGCTCAATACGCTCGTGAAAACAAAGTAC CTTACTTAGGTATCTGTCTAGGTATGCAAGTAGCACTTATCGAGTACGCTCGTAACGTTGCGAAAATGGAAGGGGCACAC TCTTCTGAATTCTGTACTGAAACTAAGTACCCAGTTGTTGGTCTTATCACTGAGTGGACTGACGGCGAAGGTAAAGTTGA AGAGCGTACAGAAACATCTGACCTTGGCGGCACAATGCGTCTTGGTTCACAGCTTTGTCACCTAGCGAAAGGGACAAAAG CTTACGAATTATACGGTAGCGCGACGATCCATGAACGTCATCGTCACCGTTACGAAGTGAACAACAATCTTCGTCCACAA ATTGAAAAAGCGGGCCTAAAAGTATCGGGTCTATCTGCGGACAAGAAACTGGTTGAAGTTATCGAGAACCCGAATCATCC ATGGTTCGTTGCTGCTCAATTCCACCCAGAGTTCACTTCAACACCTCGCGATGGTCACCCATTGTTTGCAGGTTTCGTTA AAGCAGCTGGCGAGTTCCAGCGCGGCGAATTAGAGAAGTAA
Upstream 100 bases:
>100_bases TGTGATAGATTTCACGTTGTGGCGATAAGGGGCTTCTGGTATATTTTCATCCCGTCCAGAAGTAATCCATTTCCCTCATT CAACCAATTTCAGGTTAAAC
Downstream 100 bases:
>100_bases AAAGGAATACAGGTAGCTGCGTAAGTTGTGCTGCTACCTTTAAATTTGACATTTATATATTCAACGAGAAGGAAACATTC AATGTCTAAGATCGTTAAAG
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLKVTMMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFI RTKMTKRNNFTAGRVYSDVLAKERRGDYLGATIQVIPHITNSIKERVISGAAGHDIALVEVGGTVGDIESLPFMEAIRQL AVELGRERAMFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILVCRSDRNIPSNERKKIALFCNVQENAVISMRD VDSIYKIPQLIKAQGTDELVCKRFGITAPEADLSEWEQVIYEEANPTGEVTIGMVGKYIELPDAYKSVNEALKHAGLKNR LSVNIKYVDSQDVESRGVEVLEGLDAILVPGGFGDRGVEGKILAAQYARENKVPYLGICLGMQVALIEYARNVAKMEGAH SSEFCTETKYPVVGLITEWTDGEGKVEERTETSDLGGTMRLGSQLCHLAKGTKAYELYGSATIHERHRHRYEVNNNLRPQ IEKAGLKVSGLSADKKLVEVIENPNHPWFVAAQFHPEFTSTPRDGHPLFAGFVKAAGEFQRGELEK
Sequences:
>Translated_546_residues MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLKVTMMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFI RTKMTKRNNFTAGRVYSDVLAKERRGDYLGATIQVIPHITNSIKERVISGAAGHDIALVEVGGTVGDIESLPFMEAIRQL AVELGRERAMFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILVCRSDRNIPSNERKKIALFCNVQENAVISMRD VDSIYKIPQLIKAQGTDELVCKRFGITAPEADLSEWEQVIYEEANPTGEVTIGMVGKYIELPDAYKSVNEALKHAGLKNR LSVNIKYVDSQDVESRGVEVLEGLDAILVPGGFGDRGVEGKILAAQYARENKVPYLGICLGMQVALIEYARNVAKMEGAH SSEFCTETKYPVVGLITEWTDGEGKVEERTETSDLGGTMRLGSQLCHLAKGTKAYELYGSATIHERHRHRYEVNNNLRPQ IEKAGLKVSGLSADKKLVEVIENPNHPWFVAAQFHPEFTSTPRDGHPLFAGFVKAAGEFQRGELEK >Mature_545_residues TTNYIFVTGGVVSSLGKGIAAASLAAILEARGLKVTMMKLDPYINVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFIR TKMTKRNNFTAGRVYSDVLAKERRGDYLGATIQVIPHITNSIKERVISGAAGHDIALVEVGGTVGDIESLPFMEAIRQLA VELGRERAMFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILVCRSDRNIPSNERKKIALFCNVQENAVISMRDV DSIYKIPQLIKAQGTDELVCKRFGITAPEADLSEWEQVIYEEANPTGEVTIGMVGKYIELPDAYKSVNEALKHAGLKNRL SVNIKYVDSQDVESRGVEVLEGLDAILVPGGFGDRGVEGKILAAQYARENKVPYLGICLGMQVALIEYARNVAKMEGAHS SEFCTETKYPVVGLITEWTDGEGKVEERTETSDLGGTMRLGSQLCHLAKGTKAYELYGSATIHERHRHRYEVNNNLRPQI EKAGLKVSGLSADKKLVEVIENPNHPWFVAAQFHPEFTSTPRDGHPLFAGFVKAAGEFQRGELEK
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=556, Percent_Identity=43.3453237410072, Blast_Score=463, Evalue=1e-130, Organism=Homo sapiens, GI28559085, Length=556, Percent_Identity=43.705035971223, Blast_Score=456, Evalue=1e-128, Organism=Homo sapiens, GI28559083, Length=556, Percent_Identity=43.705035971223, Blast_Score=456, Evalue=1e-128, Organism=Homo sapiens, GI221316689, Length=556, Percent_Identity=43.705035971223, Blast_Score=456, Evalue=1e-128, Organism=Escherichia coli, GI1789142, Length=541, Percent_Identity=79.1127541589649, Blast_Score=885, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=609, Percent_Identity=38.752052545156, Blast_Score=419, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6319432, Length=570, Percent_Identity=41.4035087719298, Blast_Score=438, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6322563, Length=565, Percent_Identity=40.5309734513274, Blast_Score=430, Evalue=1e-121, Organism=Drosophila melanogaster, GI24664469, Length=556, Percent_Identity=42.2661870503597, Blast_Score=446, Evalue=1e-125, Organism=Drosophila melanogaster, GI21357815, Length=502, Percent_Identity=40.6374501992032, Blast_Score=378, Evalue=1e-105,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 60002; Mature: 59871
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLKVTMMKLDPYINVDPGTMSPTQHGEV CCCCEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCEE FVTEDGAETDLDLGHYERFIRTKMTKRNNFTAGRVYSDVLAKERRGDYLGATIQVIPHIT EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH NSIKERVISGAAGHDIALVEVGGTVGDIESLPFMEAIRQLAVELGRERAMFMHLTLVPYL HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH AAAGEVKTKPTQHSVKELLSIGIQPDILVCRSDRNIPSNERKKIALFCNVQENAVISMRD HHCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEHH VDSIYKIPQLIKAQGTDELVCKRFGITAPEADLSEWEQVIYEEANPTGEVTIGMVGKYIE HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEC LPDAYKSVNEALKHAGLKNRLSVNIKYVDSQDVESRGVEVLEGLDAILVPGGFGDRGVEG CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCC KILAAQYARENKVPYLGICLGMQVALIEYARNVAKMEGAHSSEFCTETKYPVVGLITEWT CEEEHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEEECC DGEGKVEERTETSDLGGTMRLGSQLCHLAKGTKAYELYGSATIHERHRHRYEVNNNLRPQ CCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCC IEKAGLKVSGLSADKKLVEVIENPNHPWFVAAQFHPEFTSTPRDGHPLFAGFVKAAGEFQ HHHCCCEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCC RGELEK CCCCCC >Mature Secondary Structure TTNYIFVTGGVVSSLGKGIAAASLAAILEARGLKVTMMKLDPYINVDPGTMSPTQHGEV CCCEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCEE FVTEDGAETDLDLGHYERFIRTKMTKRNNFTAGRVYSDVLAKERRGDYLGATIQVIPHIT EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH NSIKERVISGAAGHDIALVEVGGTVGDIESLPFMEAIRQLAVELGRERAMFMHLTLVPYL HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH AAAGEVKTKPTQHSVKELLSIGIQPDILVCRSDRNIPSNERKKIALFCNVQENAVISMRD HHCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEHH VDSIYKIPQLIKAQGTDELVCKRFGITAPEADLSEWEQVIYEEANPTGEVTIGMVGKYIE HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEC LPDAYKSVNEALKHAGLKNRLSVNIKYVDSQDVESRGVEVLEGLDAILVPGGFGDRGVEG CCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCC KILAAQYARENKVPYLGICLGMQVALIEYARNVAKMEGAHSSEFCTETKYPVVGLITEWT CEEEHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEEECC DGEGKVEERTETSDLGGTMRLGSQLCHLAKGTKAYELYGSATIHERHRHRYEVNNNLRPQ CCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCC IEKAGLKVSGLSADKKLVEVIENPNHPWFVAAQFHPEFTSTPRDGHPLFAGFVKAAGEFQ HHHCCCEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCC RGELEK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA