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The map label for this gene is yvdB [H]

Identifier: 218710497

GI number: 218710497

Start: 2725694

End: 2727406

Strand: Reverse

Name: yvdB [H]

Synonym: VS_2536

Alternate gene names: 218710497

Gene position: 2727406-2725694 (Counterclockwise)

Preceding gene: 218710499

Following gene: 218710496

Centisome position: 82.67

GC content: 46.23

Gene sequence:

>1713_bases
GTGATAAGGTTTGTCATTTCATCATCAGGAAGGTGTGTTTTGTTTGGAAGTCGTTTTACGGATATCAATCTCAAAGGAGA
TATGTTTGGCGGTGTAACTACAGCCATCATCTCATTGCCTTTAGCGTTGGCATTTGGTGTCGCTTCTGGTGCGGGCGCGG
AAGCTGGCCTTTGGGGCGCCATCATGGTGGGCCTATTTGCGGCATTGTTTGGTGGCTCAAGCAGCTTGATATCAGAGCCT
ACCGGGCCGATGACAGTGATCATGACGGCAGTAATGACCAGCATGGTGGCCAAGTACCCTGAAACCGGGATGGCAATGAC
CTTTACCGTGGTAATGATGGCGGGTGCTTTTCAGATATTACTCGGTACATTAAAGCTAGGAAAGTACGTCACTTTGATGC
CATATAGCGTGATATCTGGCTTTATGTCCGGTATCGGCGTGATTCTTGTCATTCTGCAGCTTTCTCCTTTGCTAGGGCAC
GCAGCCCCTTCTGGCGGAGTGATGGGCACACTTTCGGCACTTCCTGATACGCTAGCAAATCTGAAAGTCAGTGAGCTGTT
TTTGGGGGTGTTAACGCTTGGTATCCTTTTCGGTTTTCCTGCTAAATATCGTAAGTATGTGCCCGCTCAATTGGTCGCTT
TAGTGGCTGTAACGCTCTTATCCGTTATTATCTTTGATACCGATTCTATTCGCCGTATTGGTGAAATTCCCGCAGGCTTA
CCTTCTCTTGTTATTCCGACTATCAGCTCTGAGCAATTCACCACAATGGTTATCGATGCTTTGGTGCTAGGTACTCTTGG
TTGTATTGATACGCTTTTGACTGCGGTTATCGGAGATTCATTGACTCGTAAAGAGCATGATTCAGACAAAGAACTTCGTG
GCCAAGGCATTGCGAATATGATTTCTGGTCTGTTTGGTGCGCTACCCGGTGCGGGCGCAACCATGGGCACCGTGACCAAT
ATTCAGGTAGGGGCTCGTTCTCCGCTTTCTGGTGTTATTCGTGCTTTGGTGCTTGCGCTAGTGGTATTGGTTGCGGGAGG
CTTAACAGAACCGATCCCTATGGCTGTGTTGGCTGGTATCGCGATGTATGTCGGTTTCAACATCCTTGATTGGAGTTTTA
TTCAGCGCGCACACAAGGTGAGTTATGCTGGCATGGGTGTCATGTACGGTGTGATGTTATTAACCGTATTCGTTGATCTA
ATTATTGCGGTGGGGCTGGGCGTTTTTATCTCAAACATTCTGATCATTGAAAGGCTGAGTCGAGAGCAAGCTAGACAAGT
TAAGGCGATCAGTGATGGCGATGATGAAGACGATATCCCATTGACTGACAGTGAACGTCAGTTACTGGATAGTGCTAATG
GTAAAGTGCTGTTCTTCTACCTTTCTGGGCCGATGATATTCAGTGTTTCAAAAGCGATTTCACGTCAACACTCGAGCATT
TCTGATTATGAAGCGATGATCTTAGACCTAACTGATGTGCCTATGATTGATGTTACCGTTGGCTTAGCGCTAGAAAATGC
GATTAAAGATGCCCTAGATGCGCAGTGTGAGGTGTACTTATTGTGTCCTAATGAGAATACTCGTCAGCAATTAGAAAAAT
TCCATGTGATTGACCTTGTGCCTGAATCCAATACTTATCGATTCAGATATGAAGCCCTGACAGCTGCAACAAGCTATGTT
GATAGAGATGAACATCAATTTGACTCGGTTTAA

Upstream 100 bases:

>100_bases
GTTAAAATCATTAACTTCGCGTAAAAGGCATAATCCGAATATAAGAGACGAATAGTGTGATTAAATTAACACTTTCTGAA
CCGTTGATACATTTGTTAAA

Downstream 100 bases:

>100_bases
TCTTCAGCAATAATTTGACATGAATCAGTTATAGACGACAAATATAGTATTGGTGATTAATGCCGTTAAGTTAATAACTT
AACGGCATTTTTTATGTTTA

Product: sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MIRFVISSSGRCVLFGSRFTDINLKGDMFGGVTTAIISLPLALAFGVASGAGAEAGLWGAIMVGLFAALFGGSSSLISEP
TGPMTVIMTAVMTSMVAKYPETGMAMTFTVVMMAGAFQILLGTLKLGKYVTLMPYSVISGFMSGIGVILVILQLSPLLGH
AAPSGGVMGTLSALPDTLANLKVSELFLGVLTLGILFGFPAKYRKYVPAQLVALVAVTLLSVIIFDTDSIRRIGEIPAGL
PSLVIPTISSEQFTTMVIDALVLGTLGCIDTLLTAVIGDSLTRKEHDSDKELRGQGIANMISGLFGALPGAGATMGTVTN
IQVGARSPLSGVIRALVLALVVLVAGGLTEPIPMAVLAGIAMYVGFNILDWSFIQRAHKVSYAGMGVMYGVMLLTVFVDL
IIAVGLGVFISNILIIERLSREQARQVKAISDGDDEDDIPLTDSERQLLDSANGKVLFFYLSGPMIFSVSKAISRQHSSI
SDYEAMILDLTDVPMIDVTVGLALENAIKDALDAQCEVYLLCPNENTRQQLEKFHVIDLVPESNTYRFRYEALTAATSYV
DRDEHQFDSV

Sequences:

>Translated_570_residues
MIRFVISSSGRCVLFGSRFTDINLKGDMFGGVTTAIISLPLALAFGVASGAGAEAGLWGAIMVGLFAALFGGSSSLISEP
TGPMTVIMTAVMTSMVAKYPETGMAMTFTVVMMAGAFQILLGTLKLGKYVTLMPYSVISGFMSGIGVILVILQLSPLLGH
AAPSGGVMGTLSALPDTLANLKVSELFLGVLTLGILFGFPAKYRKYVPAQLVALVAVTLLSVIIFDTDSIRRIGEIPAGL
PSLVIPTISSEQFTTMVIDALVLGTLGCIDTLLTAVIGDSLTRKEHDSDKELRGQGIANMISGLFGALPGAGATMGTVTN
IQVGARSPLSGVIRALVLALVVLVAGGLTEPIPMAVLAGIAMYVGFNILDWSFIQRAHKVSYAGMGVMYGVMLLTVFVDL
IIAVGLGVFISNILIIERLSREQARQVKAISDGDDEDDIPLTDSERQLLDSANGKVLFFYLSGPMIFSVSKAISRQHSSI
SDYEAMILDLTDVPMIDVTVGLALENAIKDALDAQCEVYLLCPNENTRQQLEKFHVIDLVPESNTYRFRYEALTAATSYV
DRDEHQFDSV
>Mature_570_residues
MIRFVISSSGRCVLFGSRFTDINLKGDMFGGVTTAIISLPLALAFGVASGAGAEAGLWGAIMVGLFAALFGGSSSLISEP
TGPMTVIMTAVMTSMVAKYPETGMAMTFTVVMMAGAFQILLGTLKLGKYVTLMPYSVISGFMSGIGVILVILQLSPLLGH
AAPSGGVMGTLSALPDTLANLKVSELFLGVLTLGILFGFPAKYRKYVPAQLVALVAVTLLSVIIFDTDSIRRIGEIPAGL
PSLVIPTISSEQFTTMVIDALVLGTLGCIDTLLTAVIGDSLTRKEHDSDKELRGQGIANMISGLFGALPGAGATMGTVTN
IQVGARSPLSGVIRALVLALVVLVAGGLTEPIPMAVLAGIAMYVGFNILDWSFIQRAHKVSYAGMGVMYGVMLLTVFVDL
IIAVGLGVFISNILIIERLSREQARQVKAISDGDDEDDIPLTDSERQLLDSANGKVLFFYLSGPMIFSVSKAISRQHSSI
SDYEAMILDLTDVPMIDVTVGLALENAIKDALDAQCEVYLLCPNENTRQQLEKFHVIDLVPESNTYRFRYEALTAATSYV
DRDEHQFDSV

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI20336282, Length=541, Percent_Identity=21.4417744916821, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI16306483, Length=541, Percent_Identity=21.4417744916821, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI39752683, Length=495, Percent_Identity=22.2222222222222, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI45827800, Length=493, Percent_Identity=22.3123732251521, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI45827802, Length=396, Percent_Identity=23.7373737373737, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI94721259, Length=437, Percent_Identity=21.7391304347826, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI94721255, Length=437, Percent_Identity=21.7391304347826, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI94721253, Length=437, Percent_Identity=21.7391304347826, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI94721257, Length=437, Percent_Identity=21.7391304347826, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI269784651, Length=365, Percent_Identity=23.013698630137, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI87081859, Length=439, Percent_Identity=29.3849658314351, Blast_Score=161, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI86565215, Length=440, Percent_Identity=24.0909090909091, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17566848, Length=547, Percent_Identity=23.5831809872029, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI86564196, Length=612, Percent_Identity=20.4248366013072, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17551690, Length=373, Percent_Identity=21.71581769437, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI86564876, Length=517, Percent_Identity=19.7292069632495, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193203292, Length=601, Percent_Identity=23.9600665557404, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323121, Length=439, Percent_Identity=22.7790432801822, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6319771, Length=410, Percent_Identity=24.1463414634146, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI19922482, Length=497, Percent_Identity=23.3400402414487, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21358633, Length=423, Percent_Identity=23.6406619385343, Blast_Score=83, Evalue=6e-16,
Organism=Drosophila melanogaster, GI85815873, Length=524, Percent_Identity=21.5648854961832, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24666186, Length=411, Percent_Identity=20.9245742092457, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24651449, Length=384, Percent_Identity=23.6979166666667, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24647160, Length=451, Percent_Identity=18.6252771618625, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21355087, Length=447, Percent_Identity=18.7919463087248, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 60539; Mature: 60539

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFVISSSGRCVLFGSRFTDINLKGDMFGGVTTAIISLPLALAFGVASGAGAEAGLWGA
CEEEEEECCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
IMVGLFAALFGGSSSLISEPTGPMTVIMTAVMTSMVAKYPETGMAMTFTVVMMAGAFQIL
HHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LGTLKLGKYVTLMPYSVISGFMSGIGVILVILQLSPLLGHAAPSGGVMGTLSALPDTLAN
HHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
LKVSELFLGVLTLGILFGFPAKYRKYVPAQLVALVAVTLLSVIIFDTDSIRRIGEIPAGL
CHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
PSLVIPTISSEQFTTMVIDALVLGTLGCIDTLLTAVIGDSLTRKEHDSDKELRGQGIANM
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCHHHH
ISGLFGALPGAGATMGTVTNIQVGARSPLSGVIRALVLALVVLVAGGLTEPIPMAVLAGI
HHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AMYVGFNILDWSFIQRAHKVSYAGMGVMYGVMLLTVFVDLIIAVGLGVFISNILIIERLS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REQARQVKAISDGDDEDDIPLTDSERQLLDSANGKVLFFYLSGPMIFSVSKAISRQHSSI
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCC
SDYEAMILDLTDVPMIDVTVGLALENAIKDALDAQCEVYLLCPNENTRQQLEKFHVIDLV
CCHHHHEEECCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHEEEE
PESNTYRFRYEALTAATSYVDRDEHQFDSV
CCCCCEEEEHHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MIRFVISSSGRCVLFGSRFTDINLKGDMFGGVTTAIISLPLALAFGVASGAGAEAGLWGA
CEEEEEECCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
IMVGLFAALFGGSSSLISEPTGPMTVIMTAVMTSMVAKYPETGMAMTFTVVMMAGAFQIL
HHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LGTLKLGKYVTLMPYSVISGFMSGIGVILVILQLSPLLGHAAPSGGVMGTLSALPDTLAN
HHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
LKVSELFLGVLTLGILFGFPAKYRKYVPAQLVALVAVTLLSVIIFDTDSIRRIGEIPAGL
CHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
PSLVIPTISSEQFTTMVIDALVLGTLGCIDTLLTAVIGDSLTRKEHDSDKELRGQGIANM
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCHHHH
ISGLFGALPGAGATMGTVTNIQVGARSPLSGVIRALVLALVVLVAGGLTEPIPMAVLAGI
HHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AMYVGFNILDWSFIQRAHKVSYAGMGVMYGVMLLTVFVDLIIAVGLGVFISNILIIERLS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REQARQVKAISDGDDEDDIPLTDSERQLLDSANGKVLFFYLSGPMIFSVSKAISRQHSSI
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCC
SDYEAMILDLTDVPMIDVTVGLALENAIKDALDAQCEVYLLCPNENTRQQLEKFHVIDLV
CCHHHHEEECCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHEEEE
PESNTYRFRYEALTAATSYVDRDEHQFDSV
CCCCCEEEEHHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]