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The map label for this gene is dksA [H]

Identifier: 218710489

GI number: 218710489

Start: 2718323

End: 2718769

Strand: Direct

Name: dksA [H]

Synonym: VS_2528

Alternate gene names: 218710489

Gene position: 2718323-2718769 (Clockwise)

Preceding gene: 218710488

Following gene: 218710490

Centisome position: 82.39

GC content: 45.41

Gene sequence:

>447_bases
ATGCCAGAATCTAAGAAAAAAGCGCTAGGCATCCTAGCCATCGCAGGTGTTGAACCGTACCAAGCAAAGACAGGTGAAGA
GTACATGTCACCTGAGCAAACGGAACATTTTACAAAAATTTTATCAGCTTGGCGCAACCAGCTCAGGGAAGAAGTTGATC
GTACTGTGCACCACATGCAGGACGAAGCAGCGAATTTTCCAGATCCTGTTGACCGAGCTTCTCAAGAAGAAGAATTCAGC
CTAGAGTTACGTAACCGTGACCGTGAGCGCCGTCTTATCAAGAAAATTGAGAAGACACTAGATAAGATCGAAGAAGACGA
TTTCGGCTTCTGCGACTCTTGCGGTGTCGAGATTGGTATTCGTCGTCTTGAAGCTCGTCCAACTGCTGACCTTTGTATTG
ACTGTAAAACACTTGCAGAGATCAAAGAGAAACAGATGCAAGGTTAA

Upstream 100 bases:

>100_bases
TTTAACAAGAGTATTTGCCACCATTCGTTCTTTCTGCTATAGATACCCGCCTTAAAATTAGCTGCTTTGCAGTTGACTAG
GTGTAAATAGGAGATGCTGT

Downstream 100 bases:

>100_bases
TTCTTGCGGATGTAAAGAAAGGGAGCTTTGGCTCCCTTTTTTGTTTGTTCTAAAAAGCGGTTTATATCGTTGTTGATAGC
GATAAACTAATCGCCAAACG

Product: DnaK suppressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MPESKKKALGILAIAGVEPYQAKTGEEYMSPEQTEHFTKILSAWRNQLREEVDRTVHHMQDEAANFPDPVDRASQEEEFS
LELRNRDRERRLIKKIEKTLDKIEEDDFGFCDSCGVEIGIRRLEARPTADLCIDCKTLAEIKEKQMQG

Sequences:

>Translated_148_residues
MPESKKKALGILAIAGVEPYQAKTGEEYMSPEQTEHFTKILSAWRNQLREEVDRTVHHMQDEAANFPDPVDRASQEEEFS
LELRNRDRERRLIKKIEKTLDKIEEDDFGFCDSCGVEIGIRRLEARPTADLCIDCKTLAEIKEKQMQG
>Mature_147_residues
PESKKKALGILAIAGVEPYQAKTGEEYMSPEQTEHFTKILSAWRNQLREEVDRTVHHMQDEAANFPDPVDRASQEEEFSL
ELRNRDRERRLIKKIEKTLDKIEEDDFGFCDSCGVEIGIRRLEARPTADLCIDCKTLAEIKEKQMQG

Specific function: Dosage-dependent suppressor of a dnaK deletion mutation. It suppressed not only the temperature-sensitive growth but also the filamentous phenotype of the dnaK deletion strain, while the defect of lambda growth is not suppressed [H]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=144, Percent_Identity=81.9444444444444, Blast_Score=248, Evalue=8e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR020460
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 17111; Mature: 16979

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPESKKKALGILAIAGVEPYQAKTGEEYMSPEQTEHFTKILSAWRNQLREEVDRTVHHMQ
CCCCHHHHHHHHHCCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEAANFPDPVDRASQEEEFSLELRNRDRERRLIKKIEKTLDKIEEDDFGFCDSCGVEIGI
HHHCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHH
RRLEARPTADLCIDCKTLAEIKEKQMQG
HHHCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PESKKKALGILAIAGVEPYQAKTGEEYMSPEQTEHFTKILSAWRNQLREEVDRTVHHMQ
CCCHHHHHHHHHCCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEAANFPDPVDRASQEEEFSLELRNRDRERRLIKKIEKTLDKIEEDDFGFCDSCGVEIGI
HHHCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHH
RRLEARPTADLCIDCKTLAEIKEKQMQG
HHHCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]