| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710472
Identifier: 218710472
GI number: 218710472
Start: 2691949
End: 2693670
Strand: Direct
Name: 218710472
Synonym: VS_2511
Alternate gene names: NA
Gene position: 2691949-2693670 (Clockwise)
Preceding gene: 218710471
Following gene: 218710473
Centisome position: 81.59
GC content: 46.17
Gene sequence:
>1722_bases ATGCTGTTATTGACCAACCATATTGGCTACGAATCCACGGCTCCAAAGCAGGCTATTCTGCAAACGAAGAAAGCTCGCTT ATCAAGTACGACTGCACTTTTGGTGTGTGCCGACAACCATATCACTGTCGGAAGTTTTAATGTGGTTAAACAAGGCCGCG TAGCAAATTGGCATCAAGGGCAATTCTTCACTATCGATTTCAGTTCATTCACTGAATCAGGTCGCTACTACCTACGTTTT GACAACCTACGCTCTGAAGTATTTGAGATTGGTAGCAACCTATTAATGAACCACACGTTTTCTGATGTGCTTCATTACTT TAAGTCACAACGCTGTGGCGGTAGTTTCGACAAAAAAGATCGACAAGCACAAATTATGGGCACTGACAGATACGTCGATG TTCATGGCGGTTGGTACGACGCATCGGGTGATGTAAGTAAGTACTTTAGCCACCTATCTTATGGCAATTATCTCAACCCA CAACAAATTCCGATGGTTGTTTGGAACATGCTCAAAAGCGTGCGCTTGACTAGCAATAACCCAGACTTTCCTAAATTCTC TATGACTCGTTTAGTGGAAGAAGCCCTATTCGGTGCCGATTTCTTAGTGCGTATGCAGGACGCTGACGGATACTTTTACA TGACGGTATTCGACAAGTGGAGTAAAGACATCAATCAACGTGACATCTGCGCATACGCCACTCAAGAAGGTAACAAATCA ACGGACTTGCAAGCGGGCTACCGACAAGGTGCGGGCGTTGCTATCGCCGCATTAGCTGCTGCATCTGAACTTGAAACCTC GGGCAGTTACTCGAGCCAAACTTATCTTGAAACTGCCGTTAGCGGTTATTGGCACCTAAAAGAACATAACCTGCAGTACC TAAACGATGGCGAAGAAAACATCATCGATGAATATTGTGCCCTACTCGCTGCCAATGAACTGTACCGAGTAACAGAGGAC GATCAATACCTATTAGAAGCAAGAACTTGGGCTAGTCGCTTGATCGCACGTCAGCAATCTGATGATTCAGTTGAGCACTT CTGGTCGGCAAACTCTGATGGCTCTCGCCCCTATTTCCATGCAGCTGAAGCTGGCCTTCCTGTAATTGCTCTGTGCGAGT ACATCGATAATGAAACTGACACTGAGTTGAAAGAACAAGCACGTGTGGTTGTTGAGCAAGCTTGTCAATTCGAAATCAAC ATTACCGACAAAGTCATCAACCCATTTGGCTACCCAAGACAATACGTAAAATCTGTCGATGGTGATAAACGCGATGCTTT CTTCGTTGCTCAGAAGAACGAGACAGGCTACTGGTGGCAAGGCGAAAACGCACGTCTTGGCTCAATTGCGACCATGGCGT ACTTAGTTCAACCACACATTCAAAATGCCGATCTTCAAAAGCGCTTAATCCAGCTTTCGCAAAACAGCCTTGATTGGATC TTAGGTCTCAACCCATATCACATGTGTATGCTCGATGGTCACGGTCATAACAACCCAGACTATCTACCACAACTTGGCTT CTTCAATGCCAAAGGCGGTGTCTGCAACGGCATCACGGCAGGGTTCGAAGACGAACAAGACATCGCATTCAACCCACCAG CACAGAAAGACGACATGCTTCAAAACTGGCGCTGGGGTGAACAATGGATCCCTCATGGGGCGTGGTATTTGCTAGCAACG GCTGCGCAATTCAACTTCCTAGCACAAAGTAAGGAGCAATAA
Upstream 100 bases:
>100_bases GTTAGGGTCTGCGGGCCCTAACTATTTATATCCAAAACATTTTATATCCAAAACATTCAAGTACCTAGCCAATAGAAACT AGGACTGTCGGAGAATATTG
Downstream 100 bases:
>100_bases TCATGACGCTTTACTACGTAGGTATTGATGGTGGCGGTACATCTTGCCGTGCTCGCATTCGTGATGACCAAGGCAAACTC ATTGGTGAAGCGAAAAGTGG
Product: endoglucanase-like protein
Products: NA
Alternate protein names: Endoglucanase-Related Protein; Endoglucanase-Like Protein; Chitobiase; Glycoside Hydrolase Family Protein; Endoglucanase; Glucosamine-Link Cellobiase; Beta-Glycosidase-Like Protein; Glycosy Hydrolase Family Protein
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MLLLTNHIGYESTAPKQAILQTKKARLSSTTALLVCADNHITVGSFNVVKQGRVANWHQGQFFTIDFSSFTESGRYYLRF DNLRSEVFEIGSNLLMNHTFSDVLHYFKSQRCGGSFDKKDRQAQIMGTDRYVDVHGGWYDASGDVSKYFSHLSYGNYLNP QQIPMVVWNMLKSVRLTSNNPDFPKFSMTRLVEEALFGADFLVRMQDADGYFYMTVFDKWSKDINQRDICAYATQEGNKS TDLQAGYRQGAGVAIAALAAASELETSGSYSSQTYLETAVSGYWHLKEHNLQYLNDGEENIIDEYCALLAANELYRVTED DQYLLEARTWASRLIARQQSDDSVEHFWSANSDGSRPYFHAAEAGLPVIALCEYIDNETDTELKEQARVVVEQACQFEIN ITDKVINPFGYPRQYVKSVDGDKRDAFFVAQKNETGYWWQGENARLGSIATMAYLVQPHIQNADLQKRLIQLSQNSLDWI LGLNPYHMCMLDGHGHNNPDYLPQLGFFNAKGGVCNGITAGFEDEQDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLLAT AAQFNFLAQSKEQ
Sequences:
>Translated_573_residues MLLLTNHIGYESTAPKQAILQTKKARLSSTTALLVCADNHITVGSFNVVKQGRVANWHQGQFFTIDFSSFTESGRYYLRF DNLRSEVFEIGSNLLMNHTFSDVLHYFKSQRCGGSFDKKDRQAQIMGTDRYVDVHGGWYDASGDVSKYFSHLSYGNYLNP QQIPMVVWNMLKSVRLTSNNPDFPKFSMTRLVEEALFGADFLVRMQDADGYFYMTVFDKWSKDINQRDICAYATQEGNKS TDLQAGYRQGAGVAIAALAAASELETSGSYSSQTYLETAVSGYWHLKEHNLQYLNDGEENIIDEYCALLAANELYRVTED DQYLLEARTWASRLIARQQSDDSVEHFWSANSDGSRPYFHAAEAGLPVIALCEYIDNETDTELKEQARVVVEQACQFEIN ITDKVINPFGYPRQYVKSVDGDKRDAFFVAQKNETGYWWQGENARLGSIATMAYLVQPHIQNADLQKRLIQLSQNSLDWI LGLNPYHMCMLDGHGHNNPDYLPQLGFFNAKGGVCNGITAGFEDEQDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLLAT AAQFNFLAQSKEQ >Mature_573_residues MLLLTNHIGYESTAPKQAILQTKKARLSSTTALLVCADNHITVGSFNVVKQGRVANWHQGQFFTIDFSSFTESGRYYLRF DNLRSEVFEIGSNLLMNHTFSDVLHYFKSQRCGGSFDKKDRQAQIMGTDRYVDVHGGWYDASGDVSKYFSHLSYGNYLNP QQIPMVVWNMLKSVRLTSNNPDFPKFSMTRLVEEALFGADFLVRMQDADGYFYMTVFDKWSKDINQRDICAYATQEGNKS TDLQAGYRQGAGVAIAALAAASELETSGSYSSQTYLETAVSGYWHLKEHNLQYLNDGEENIIDEYCALLAANELYRVTED DQYLLEARTWASRLIARQQSDDSVEHFWSANSDGSRPYFHAAEAGLPVIALCEYIDNETDTELKEQARVVVEQACQFEIN ITDKVINPFGYPRQYVKSVDGDKRDAFFVAQKNETGYWWQGENARLGSIATMAYLVQPHIQNADLQKRLIQLSQNSLDWI LGLNPYHMCMLDGHGHNNPDYLPQLGFFNAKGGVCNGITAGFEDEQDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLLAT AAQFNFLAQSKEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65116; Mature: 65116
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLTNHIGYESTAPKQAILQTKKARLSSTTALLVCADNHITVGSFNVVKQGRVANWHQG CEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCEEEECCCHHEECCCCCCCCCC QFFTIDFSSFTESGRYYLRFDNLRSEVFEIGSNLLMNHTFSDVLHYFKSQRCGGSFDKKD EEEEEEHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC RQAQIMGTDRYVDVHGGWYDASGDVSKYFSHLSYGNYLNPQQIPMVVWNMLKSVRLTSNN CCEEEEECCEEEEECCCEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCC PDFPKFSMTRLVEEALFGADFLVRMQDADGYFYMTVFDKWSKDINQRDICAYATQEGNKS CCCCCHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEEEHHHHCCCCCCEEEEECCCCCCC TDLQAGYRQGAGVAIAALAAASELETSGSYSSQTYLETAVSGYWHLKEHNLQYLNDGEEN CCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCHHH IIDEYCALLAANELYRVTEDDQYLLEARTWASRLIARQQSDDSVEHFWSANSDGSRPYFH HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEE AAEAGLPVIALCEYIDNETDTELKEQARVVVEQACQFEINITDKVINPFGYPRQYVKSVD HHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEHHHHCCCCCCCHHHHHHCC GDKRDAFFVAQKNETGYWWQGENARLGSIATMAYLVQPHIQNADLQKRLIQLSQNSLDWI CCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEE LGLNPYHMCMLDGHGHNNPDYLPQLGFFNAKGGVCNGITAGFEDEQDIAFNPPAQKDDML ECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH QNWRWGEQWIPHGAWYLLATAAQFNFLAQSKEQ HCCCCCHHCCCCCHHEEEHHHHHHHHHHCCCCC >Mature Secondary Structure MLLLTNHIGYESTAPKQAILQTKKARLSSTTALLVCADNHITVGSFNVVKQGRVANWHQG CEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCEEEECCCHHEECCCCCCCCCC QFFTIDFSSFTESGRYYLRFDNLRSEVFEIGSNLLMNHTFSDVLHYFKSQRCGGSFDKKD EEEEEEHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC RQAQIMGTDRYVDVHGGWYDASGDVSKYFSHLSYGNYLNPQQIPMVVWNMLKSVRLTSNN CCEEEEECCEEEEECCCEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCC PDFPKFSMTRLVEEALFGADFLVRMQDADGYFYMTVFDKWSKDINQRDICAYATQEGNKS CCCCCHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEEEHHHHCCCCCCEEEEECCCCCCC TDLQAGYRQGAGVAIAALAAASELETSGSYSSQTYLETAVSGYWHLKEHNLQYLNDGEEN CCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCHHH IIDEYCALLAANELYRVTEDDQYLLEARTWASRLIARQQSDDSVEHFWSANSDGSRPYFH HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEE AAEAGLPVIALCEYIDNETDTELKEQARVVVEQACQFEINITDKVINPFGYPRQYVKSVD HHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEEHHHHCCCCCCCHHHHHHCC GDKRDAFFVAQKNETGYWWQGENARLGSIATMAYLVQPHIQNADLQKRLIQLSQNSLDWI CCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEE LGLNPYHMCMLDGHGHNNPDYLPQLGFFNAKGGVCNGITAGFEDEQDIAFNPPAQKDDML ECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH QNWRWGEQWIPHGAWYLLATAAQFNFLAQSKEQ HCCCCCHHCCCCCHHEEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA