| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710457
Identifier: 218710457
GI number: 218710457
Start: 2668541
End: 2669407
Strand: Reverse
Name: 218710457
Synonym: VS_2496
Alternate gene names: NA
Gene position: 2669407-2668541 (Counterclockwise)
Preceding gene: 218710458
Following gene: 218710454
Centisome position: 80.91
GC content: 46.37
Gene sequence:
>867_bases TTGCCAATCGGGAGATTCGCCATGACGGTAATGAACAACACTTTTTTATCTATTGAAGCTCTGTACTCAGAGCAAGACAT CCAAGCTGTATCGAATGCTTTTCAACAGTACGGACGTGAGCAACAAATTAACCTTTTGAACCGCATGCCACTTGAAGATG CGGTGTTAGTGCTTGGGCAATGCTCTCTGAGTACGATTCAGACTTTACTTAGTGAGCTAGAAGAGCAGGGCTTTGAGAAG CGCTCTCGACATCTAGCTCACCAACTAGGGCTGATCTACTCAGAGGTTGAACCTCAACAAGGTTACTTTTCAACTGGAGT GCTTAGCCATGTTAGGCAGCGTATCGGTTGGATTATTGCCTTAGCACTGCTGGGCATTGTCTCTGGGCTTATCATTGCTC AGTATGAAGACATTCTTAGTCAGCTAGTACTTCTGGCGATTTATATGCCGGTAATCGCTGCCGCGGGTGGCAACACAGGA ACACAAGCTGCGACTTTGGTCATTAGGGCCTTAGCCACAGGGGAATTGAAGAAACGCCAGTGGGCCAACGTTCTATGGAA AGAGCTTAGAGTTGCTATCTGTTTAGCTCTTGCGATCGCCTTGGTGATGATTGGCCGAATCTTATTATTCAGTGACAACC AGTCAACGGGTGGTTACGACATTAATATGATTGCTTACGCGATTGCTGTTGCTCTGTTTATTCAAGTGACCATATCAACT GTACTCGGCGGCGGGTTACCGATAGTCGCTCGATTCTTCAAACTTGATCCTGCTGTGTTAGTGAGCCCTGTACTGGCTTC GATAGTGGATATCTCTGGGATGTGGATCTACTTCACTGTGGTTAATTCATTCTTAGGGATCGCTTAG
Upstream 100 bases:
>100_bases TTGTATATTCTTGATGTATATAGCTATAGGCTCTTGGTGTACACCGCTTTATACTCTCGGGGTACTCTCTATAGGCTACT TGTTTTGATGGTCGTTACCT
Downstream 100 bases:
>100_bases CGTTTATAAAAATAGCTAAAAGCACCTTATGAGACAAAAATGGCGCTGAAGATTCAAGATCTTCAGCGCCATTTTTATTG CTTAAGTAGAAGCTTAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MPIGRFAMTVMNNTFLSIEALYSEQDIQAVSNAFQQYGREQQINLLNRMPLEDAVLVLGQCSLSTIQTLLSELEEQGFEK RSRHLAHQLGLIYSEVEPQQGYFSTGVLSHVRQRIGWIIALALLGIVSGLIIAQYEDILSQLVLLAIYMPVIAAAGGNTG TQAATLVIRALATGELKKRQWANVLWKELRVAICLALAIALVMIGRILLFSDNQSTGGYDINMIAYAIAVALFIQVTIST VLGGGLPIVARFFKLDPAVLVSPVLASIVDISGMWIYFTVVNSFLGIA
Sequences:
>Translated_288_residues MPIGRFAMTVMNNTFLSIEALYSEQDIQAVSNAFQQYGREQQINLLNRMPLEDAVLVLGQCSLSTIQTLLSELEEQGFEK RSRHLAHQLGLIYSEVEPQQGYFSTGVLSHVRQRIGWIIALALLGIVSGLIIAQYEDILSQLVLLAIYMPVIAAAGGNTG TQAATLVIRALATGELKKRQWANVLWKELRVAICLALAIALVMIGRILLFSDNQSTGGYDINMIAYAIAVALFIQVTIST VLGGGLPIVARFFKLDPAVLVSPVLASIVDISGMWIYFTVVNSFLGIA >Mature_287_residues PIGRFAMTVMNNTFLSIEALYSEQDIQAVSNAFQQYGREQQINLLNRMPLEDAVLVLGQCSLSTIQTLLSELEEQGFEKR SRHLAHQLGLIYSEVEPQQGYFSTGVLSHVRQRIGWIIALALLGIVSGLIIAQYEDILSQLVLLAIYMPVIAAAGGNTGT QAATLVIRALATGELKKRQWANVLWKELRVAICLALAIALVMIGRILLFSDNQSTGGYDINMIAYAIAVALFIQVTISTV LGGGLPIVARFFKLDPAVLVSPVLASIVDISGMWIYFTVVNSFLGIA
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 31429; Mature: 31298
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIGRFAMTVMNNTFLSIEALYSEQDIQAVSNAFQQYGREQQINLLNRMPLEDAVLVLGQ CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHC CSLSTIQTLLSELEEQGFEKRSRHLAHQLGLIYSEVEPQQGYFSTGVLSHVRQRIGWIIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LALLGIVSGLIIAQYEDILSQLVLLAIYMPVIAAAGGNTGTQAATLVIRALATGELKKRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH WANVLWKELRVAICLALAIALVMIGRILLFSDNQSTGGYDINMIAYAIAVALFIQVTIST HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH VLGGGLPIVARFFKLDPAVLVSPVLASIVDISGMWIYFTVVNSFLGIA HHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure PIGRFAMTVMNNTFLSIEALYSEQDIQAVSNAFQQYGREQQINLLNRMPLEDAVLVLGQ CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHC CSLSTIQTLLSELEEQGFEKRSRHLAHQLGLIYSEVEPQQGYFSTGVLSHVRQRIGWIIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LALLGIVSGLIIAQYEDILSQLVLLAIYMPVIAAAGGNTGTQAATLVIRALATGELKKRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH WANVLWKELRVAICLALAIALVMIGRILLFSDNQSTGGYDINMIAYAIAVALFIQVTIST HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH VLGGGLPIVARFFKLDPAVLVSPVLASIVDISGMWIYFTVVNSFLGIA HHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA