Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710457

Identifier: 218710457

GI number: 218710457

Start: 2668541

End: 2669407

Strand: Reverse

Name: 218710457

Synonym: VS_2496

Alternate gene names: NA

Gene position: 2669407-2668541 (Counterclockwise)

Preceding gene: 218710458

Following gene: 218710454

Centisome position: 80.91

GC content: 46.37

Gene sequence:

>867_bases
TTGCCAATCGGGAGATTCGCCATGACGGTAATGAACAACACTTTTTTATCTATTGAAGCTCTGTACTCAGAGCAAGACAT
CCAAGCTGTATCGAATGCTTTTCAACAGTACGGACGTGAGCAACAAATTAACCTTTTGAACCGCATGCCACTTGAAGATG
CGGTGTTAGTGCTTGGGCAATGCTCTCTGAGTACGATTCAGACTTTACTTAGTGAGCTAGAAGAGCAGGGCTTTGAGAAG
CGCTCTCGACATCTAGCTCACCAACTAGGGCTGATCTACTCAGAGGTTGAACCTCAACAAGGTTACTTTTCAACTGGAGT
GCTTAGCCATGTTAGGCAGCGTATCGGTTGGATTATTGCCTTAGCACTGCTGGGCATTGTCTCTGGGCTTATCATTGCTC
AGTATGAAGACATTCTTAGTCAGCTAGTACTTCTGGCGATTTATATGCCGGTAATCGCTGCCGCGGGTGGCAACACAGGA
ACACAAGCTGCGACTTTGGTCATTAGGGCCTTAGCCACAGGGGAATTGAAGAAACGCCAGTGGGCCAACGTTCTATGGAA
AGAGCTTAGAGTTGCTATCTGTTTAGCTCTTGCGATCGCCTTGGTGATGATTGGCCGAATCTTATTATTCAGTGACAACC
AGTCAACGGGTGGTTACGACATTAATATGATTGCTTACGCGATTGCTGTTGCTCTGTTTATTCAAGTGACCATATCAACT
GTACTCGGCGGCGGGTTACCGATAGTCGCTCGATTCTTCAAACTTGATCCTGCTGTGTTAGTGAGCCCTGTACTGGCTTC
GATAGTGGATATCTCTGGGATGTGGATCTACTTCACTGTGGTTAATTCATTCTTAGGGATCGCTTAG

Upstream 100 bases:

>100_bases
TTGTATATTCTTGATGTATATAGCTATAGGCTCTTGGTGTACACCGCTTTATACTCTCGGGGTACTCTCTATAGGCTACT
TGTTTTGATGGTCGTTACCT

Downstream 100 bases:

>100_bases
CGTTTATAAAAATAGCTAAAAGCACCTTATGAGACAAAAATGGCGCTGAAGATTCAAGATCTTCAGCGCCATTTTTATTG
CTTAAGTAGAAGCTTAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MPIGRFAMTVMNNTFLSIEALYSEQDIQAVSNAFQQYGREQQINLLNRMPLEDAVLVLGQCSLSTIQTLLSELEEQGFEK
RSRHLAHQLGLIYSEVEPQQGYFSTGVLSHVRQRIGWIIALALLGIVSGLIIAQYEDILSQLVLLAIYMPVIAAAGGNTG
TQAATLVIRALATGELKKRQWANVLWKELRVAICLALAIALVMIGRILLFSDNQSTGGYDINMIAYAIAVALFIQVTIST
VLGGGLPIVARFFKLDPAVLVSPVLASIVDISGMWIYFTVVNSFLGIA

Sequences:

>Translated_288_residues
MPIGRFAMTVMNNTFLSIEALYSEQDIQAVSNAFQQYGREQQINLLNRMPLEDAVLVLGQCSLSTIQTLLSELEEQGFEK
RSRHLAHQLGLIYSEVEPQQGYFSTGVLSHVRQRIGWIIALALLGIVSGLIIAQYEDILSQLVLLAIYMPVIAAAGGNTG
TQAATLVIRALATGELKKRQWANVLWKELRVAICLALAIALVMIGRILLFSDNQSTGGYDINMIAYAIAVALFIQVTIST
VLGGGLPIVARFFKLDPAVLVSPVLASIVDISGMWIYFTVVNSFLGIA
>Mature_287_residues
PIGRFAMTVMNNTFLSIEALYSEQDIQAVSNAFQQYGREQQINLLNRMPLEDAVLVLGQCSLSTIQTLLSELEEQGFEKR
SRHLAHQLGLIYSEVEPQQGYFSTGVLSHVRQRIGWIIALALLGIVSGLIIAQYEDILSQLVLLAIYMPVIAAAGGNTGT
QAATLVIRALATGELKKRQWANVLWKELRVAICLALAIALVMIGRILLFSDNQSTGGYDINMIAYAIAVALFIQVTISTV
LGGGLPIVARFFKLDPAVLVSPVLASIVDISGMWIYFTVVNSFLGIA

Specific function: Acts as a magnesium transporter [H]

COG id: COG2239

COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR006668
- InterPro:   IPR006667
- InterPro:   IPR006669 [H]

Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]

EC number: NA

Molecular weight: Translated: 31429; Mature: 31298

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIGRFAMTVMNNTFLSIEALYSEQDIQAVSNAFQQYGREQQINLLNRMPLEDAVLVLGQ
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHC
CSLSTIQTLLSELEEQGFEKRSRHLAHQLGLIYSEVEPQQGYFSTGVLSHVRQRIGWIIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LALLGIVSGLIIAQYEDILSQLVLLAIYMPVIAAAGGNTGTQAATLVIRALATGELKKRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
WANVLWKELRVAICLALAIALVMIGRILLFSDNQSTGGYDINMIAYAIAVALFIQVTIST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VLGGGLPIVARFFKLDPAVLVSPVLASIVDISGMWIYFTVVNSFLGIA
HHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PIGRFAMTVMNNTFLSIEALYSEQDIQAVSNAFQQYGREQQINLLNRMPLEDAVLVLGQ
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHC
CSLSTIQTLLSELEEQGFEKRSRHLAHQLGLIYSEVEPQQGYFSTGVLSHVRQRIGWIIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LALLGIVSGLIIAQYEDILSQLVLLAIYMPVIAAAGGNTGTQAATLVIRALATGELKKRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
WANVLWKELRVAICLALAIALVMIGRILLFSDNQSTGGYDINMIAYAIAVALFIQVTIST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VLGGGLPIVARFFKLDPAVLVSPVLASIVDISGMWIYFTVVNSFLGIA
HHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA