| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is glmM
Identifier: 218710449
GI number: 218710449
Start: 2659324
End: 2660664
Strand: Reverse
Name: glmM
Synonym: VS_2488
Alternate gene names: 218710449
Gene position: 2660664-2659324 (Counterclockwise)
Preceding gene: 218710450
Following gene: 218710448
Centisome position: 80.64
GC content: 46.98
Gene sequence:
>1341_bases ATGTCTGAAAAAAGACGTTACTTCGGCACAGATGGTGTACGTGGAAAAGTGGGCCAGTACCCAATCACACCTGATTTTGT TTTGAAGCTTGGCTGGGCTGCTGGTCGTGTTCTTGCAAAGCAGGGCACAAAGAAAGTGATCATTGGTAAAGATACTCGTA TTTCTGGCTACATGCTTGAGTCTGCTTTAGAAGCTGGCTTAGCTGCTGCTGGTCTTCAAGCTACGTTTACGGGGCCAATG CCGACACCGGCTGTTGCCTACCTAACACAAACTTTCCGTGCTGAAGCGGGGATTGTTATCTCTGCATCGCACAACCCATA TTACGATAACGGTATTAAGTTCTTCTCTTCTGAAGGGACTAAGTTGTCGGATGAAATTGAGTTGGCTATCGAAGCCGAAC TAGACAAAGATATCGAGTGCGTGGAATCTTCCGAATTAGGTAAAGCGGTACGCCTAAATGATGCAGCAGGCCGTTATATT GAATTTTGTAAAAGTACATTCCCACACAAAATGACGCTAGCGGGTATGAAAATTGTGGTGGATTGCGCGCATGGTGCGAC TTACCACATTGCGCCGGCTGTATTTAAAGAGCTGGGTGCTGAGGTTGTTGCGATTGGTGTGGAGCCAAATGGCACTAACA TCAACCATGAAGTCGGTGCGACTGATGTACGCGCTCTGCAAGCTAAAGTGGTTGAAGAAAAAGCGGCGTTAGGCCTTGGC TTTGATGGTGATGGTGACCGCATCATCATGGTTGACGAGCTAGGCAATAAAGTTGATGGTGACCAAATCGCTTACATTAT TGCTCGCGATGCACTGCGTCGTGGTGAGTTGAAAGGTGGCGTTGTTGGTACGCTAATGACCAACCTTGGGATGGAAAACG GCCTTAAGCAGTTAGGTATTCCGTTTGTACGTGCTGCTGTCGGCGACCGTTACGTTATGGAACAACTTCTAGCTAAAGGC TGGAAGATCGGTGCTGAGAACTCGGGGCACGTTATCCTATTAGATAAAGTGACGACAGGTGATGCTATCGTTGCTGCTCT GCAAGTATTGGCCTCAGTTGTCGATAGTGAAATGACACTGAATGAACTTTCTCAAGGTATGACGTTATACCCTCAAGTTC TAGAAAATGTTCGTTTCAGTGGTGATTCAAACCCACTAGAAGCAGAGGCTGTGAAAGCGGCTGTTATTGAAGTCGAGACG GAACTCGGTGAGAAAGGTCGTGTGCTATTACGCAAATCGGGTACTGAGCCACTACTGCGCGTAATGGTCGAAGGTGAAGA TGCTGAACTTGTTCAGAGTTCTGCACTGAAAATTGCTGATGCAGTAAAAGCGAATTGCTAA
Upstream 100 bases:
>100_bases TCAAATTATTCGCGTTCACGATGTAGAAGATACATTGGAAGCGATGAAGATAATCGAAGTGATGAATAACAATCACTAAT CATAATTAAGGAAAATCAAT
Downstream 100 bases:
>100_bases TAAAACGTTTGCCGTAACAGGCGAAGTCGGTCTCACTTGTGGGGGCCGGGTTTTAGTTATGTGATGATTAAAAAGGGACG CAAATGAGTTTTGTGTCCCT
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSEKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTKKVIIGKDTRISGYMLESALEAGLAAAGLQATFTGPM PTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTKLSDEIELAIEAELDKDIECVESSELGKAVRLNDAAGRYI EFCKSTFPHKMTLAGMKIVVDCAHGATYHIAPAVFKELGAEVVAIGVEPNGTNINHEVGATDVRALQAKVVEEKAALGLG FDGDGDRIIMVDELGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGIPFVRAAVGDRYVMEQLLAKG WKIGAENSGHVILLDKVTTGDAIVAALQVLASVVDSEMTLNELSQGMTLYPQVLENVRFSGDSNPLEAEAVKAAVIEVET ELGEKGRVLLRKSGTEPLLRVMVEGEDAELVQSSALKIADAVKANC
Sequences:
>Translated_446_residues MSEKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTKKVIIGKDTRISGYMLESALEAGLAAAGLQATFTGPM PTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTKLSDEIELAIEAELDKDIECVESSELGKAVRLNDAAGRYI EFCKSTFPHKMTLAGMKIVVDCAHGATYHIAPAVFKELGAEVVAIGVEPNGTNINHEVGATDVRALQAKVVEEKAALGLG FDGDGDRIIMVDELGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGIPFVRAAVGDRYVMEQLLAKG WKIGAENSGHVILLDKVTTGDAIVAALQVLASVVDSEMTLNELSQGMTLYPQVLENVRFSGDSNPLEAEAVKAAVIEVET ELGEKGRVLLRKSGTEPLLRVMVEGEDAELVQSSALKIADAVKANC >Mature_445_residues SEKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTKKVIIGKDTRISGYMLESALEAGLAAAGLQATFTGPMP TPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGTKLSDEIELAIEAELDKDIECVESSELGKAVRLNDAAGRYIE FCKSTFPHKMTLAGMKIVVDCAHGATYHIAPAVFKELGAEVVAIGVEPNGTNINHEVGATDVRALQAKVVEEKAALGLGF DGDGDRIIMVDELGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGIPFVRAAVGDRYVMEQLLAKGW KIGAENSGHVILLDKVTTGDAIVAALQVLASVVDSEMTLNELSQGMTLYPQVLENVRFSGDSNPLEAEAVKAAVIEVETE LGEKGRVLLRKSGTEPLLRVMVEGEDAELVQSSALKIADAVKANC
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=442, Percent_Identity=72.8506787330317, Blast_Score=649, Evalue=0.0, Organism=Escherichia coli, GI1788361, Length=458, Percent_Identity=25.5458515283843, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_VIBSL (B7VJI1)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002418070.1 - ProteinModelPortal: B7VJI1 - GeneID: 7162023 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_2488 - HOGENOM: HBG644964 - OMA: VHDRYIE - ProtClustDB: PRK10887 - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 47600; Mature: 47469
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 103-103
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTKKVIIGKDTRISGYMLE CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHHH SALEAGLAAAGLQATFTGPMPTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGT HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCC KLSDEIELAIEAELDKDIECVESSELGKAVRLNDAAGRYIEFCKSTFPHKMTLAGMKIVV CCCCCEEEEEEECCCCCHHHHCHHHCCCEEEECCHHHHHHHHHHHCCCCEEEECCEEEEE DCAHGATYHIAPAVFKELGAEVVAIGVEPNGTNINHEVGATDVRALQAKVVEEKAALGLG EECCCCEEEHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECC FDGDGDRIIMVDELGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGI CCCCCCEEEEEECCCCCCCCCCEEEHEEHHHHHHCCCCCCHHHHHHHHCCHHCCHHHHCC PFVRAAVGDRYVMEQLLAKGWKIGAENSGHVILLDKVTTGDAIVAALQVLASVVDSEMTL HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCH NELSQGMTLYPQVLENVRFSGDSNPLEAEAVKAAVIEVETELGEKGRVLLRKSGTEPLLR HHHHCCCEEHHHHHHCCCCCCCCCCCHHHHHHHHEEEEEHHCCCCCCEEEEECCCCCEEE VMVEGEDAELVQSSALKIADAVKANC EEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEKRRYFGTDGVRGKVGQYPITPDFVLKLGWAAGRVLAKQGTKKVIIGKDTRISGYMLE CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHHH SALEAGLAAAGLQATFTGPMPTPAVAYLTQTFRAEAGIVISASHNPYYDNGIKFFSSEGT HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCC KLSDEIELAIEAELDKDIECVESSELGKAVRLNDAAGRYIEFCKSTFPHKMTLAGMKIVV CCCCCEEEEEEECCCCCHHHHCHHHCCCEEEECCHHHHHHHHHHHCCCCEEEECCEEEEE DCAHGATYHIAPAVFKELGAEVVAIGVEPNGTNINHEVGATDVRALQAKVVEEKAALGLG EECCCCEEEHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECC FDGDGDRIIMVDELGNKVDGDQIAYIIARDALRRGELKGGVVGTLMTNLGMENGLKQLGI CCCCCCEEEEEECCCCCCCCCCEEEHEEHHHHHHCCCCCCHHHHHHHHCCHHCCHHHHCC PFVRAAVGDRYVMEQLLAKGWKIGAENSGHVILLDKVTTGDAIVAALQVLASVVDSEMTL HHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCH NELSQGMTLYPQVLENVRFSGDSNPLEAEAVKAAVIEVETELGEKGRVLLRKSGTEPLLR HHHHCCCEEHHHHHHCCCCCCCCCCCHHHHHHHHEEEEEHHCCCCCCEEEEECCCCCEEE VMVEGEDAELVQSSALKIADAVKANC EEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA