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The map label for this gene is yhbV [H]

Identifier: 218710437

GI number: 218710437

Start: 2645056

End: 2645934

Strand: Direct

Name: yhbV [H]

Synonym: VS_2474

Alternate gene names: 218710437

Gene position: 2645056-2645934 (Clockwise)

Preceding gene: 218710436

Following gene: 218710453

Centisome position: 80.17

GC content: 45.51

Gene sequence:

>879_bases
ATGAAATACGCATTAGGCCCTCTACTTTATTTTTGGCCAAAACAAGATGTTGAAAGCTTCTATGAGCAAGCAAAATCAAG
CTCTGCCGACATCATCTACCTCGGTGAAGCGGTGTGCTCAAAGCGCCGTGAGATGAAAGCAAAACACTGGATGGACATAG
CAAAAGAGCTGTCTGATTCAGGTAAGCAAGTGGTACTTTCAACCATGGCATTGCTAGAAGCCCCAAGCGAAGTCAACATC
ATGAAGAAGTACATTGATAACGGTGACTTCGCCATTGAAGCCAATGATGTATCTGCGATTCAACTGGCAAGTGAAAGTAA
GGTGCCTTTTGTTGTTGGCCCTGCGGTGAACACCTACAATGCACGCACTCTGAACCTGTTCTTGAAACAAGGTATGACGC
GTTGGTGTATGCCCGTTGAGCTTTCTCGCGAGTGGCTAAGCAACGTAATGAAACAGTGCGAAGAGCTTAATATTCGTAAT
AAGTTCGAAGTAGAAGTGTTTAGCCATGGCTACTTACCTCTTGCTTACTCTGCACGTTGCTTTACAGCCCGAGCAGAGAA
CAAAGCCAAAGACGATTGCGAAACCTGCTGCATCAAATACCCAACAGGTCTACAGGTCGAAAGCCAAGAAGGCCAATCGG
TATTTAACCTTAATGGTATCCAGACGCAATCAGGTTATTGCTACAACCTAGTCAATGATCTACCGAGCATGCATGACTTG
GTCGATGTCGTTCGCCTGAGTCCATGGGGTATCGACACTTTCTCTGAAATCAATAACTTCAGAGCGAACGAGCAAGGTCA
AAAACCAATGAAGATTGAAAGCCGCCAGTGCAATGGCTACTGGCATCAGCTTGCGGGTTTAGACGTTAAAAACATCTAG

Upstream 100 bases:

>100_bases
ACAAGCTTGGAATGCGACACTGGCGAATGTATCTGAAGGTACACAAACCACGCTTGGCGCTTACCACCGTAAATGGCAAT
AGAGCCAAATGGAGAACTCA

Downstream 100 bases:

>100_bases
TTTCTAGAGTTAAACCCATCAGCCACAGAGACAAAAAGGTCTAGCATTCGCTAGACCTTTTTAATTCTACTTAAGAAATA
CGACCTATGCCGCCGCTGTA

Product: putative protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKYALGPLLYFWPKQDVESFYEQAKSSSADIIYLGEAVCSKRREMKAKHWMDIAKELSDSGKQVVLSTMALLEAPSEVNI
MKKYIDNGDFAIEANDVSAIQLASESKVPFVVGPAVNTYNARTLNLFLKQGMTRWCMPVELSREWLSNVMKQCEELNIRN
KFEVEVFSHGYLPLAYSARCFTARAENKAKDDCETCCIKYPTGLQVESQEGQSVFNLNGIQTQSGYCYNLVNDLPSMHDL
VDVVRLSPWGIDTFSEINNFRANEQGQKPMKIESRQCNGYWHQLAGLDVKNI

Sequences:

>Translated_292_residues
MKYALGPLLYFWPKQDVESFYEQAKSSSADIIYLGEAVCSKRREMKAKHWMDIAKELSDSGKQVVLSTMALLEAPSEVNI
MKKYIDNGDFAIEANDVSAIQLASESKVPFVVGPAVNTYNARTLNLFLKQGMTRWCMPVELSREWLSNVMKQCEELNIRN
KFEVEVFSHGYLPLAYSARCFTARAENKAKDDCETCCIKYPTGLQVESQEGQSVFNLNGIQTQSGYCYNLVNDLPSMHDL
VDVVRLSPWGIDTFSEINNFRANEQGQKPMKIESRQCNGYWHQLAGLDVKNI
>Mature_292_residues
MKYALGPLLYFWPKQDVESFYEQAKSSSADIIYLGEAVCSKRREMKAKHWMDIAKELSDSGKQVVLSTMALLEAPSEVNI
MKKYIDNGDFAIEANDVSAIQLASESKVPFVVGPAVNTYNARTLNLFLKQGMTRWCMPVELSREWLSNVMKQCEELNIRN
KFEVEVFSHGYLPLAYSARCFTARAENKAKDDCETCCIKYPTGLQVESQEGQSVFNLNGIQTQSGYCYNLVNDLPSMHDL
VDVVRLSPWGIDTFSEINNFRANEQGQKPMKIESRQCNGYWHQLAGLDVKNI

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=291, Percent_Identity=62.1993127147766, Blast_Score=400, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 33149; Mature: 33149

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYALGPLLYFWPKQDVESFYEQAKSSSADIIYLGEAVCSKRREMKAKHWMDIAKELSDS
CCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
GKQVVLSTMALLEAPSEVNIMKKYIDNGDFAIEANDVSAIQLASESKVPFVVGPAVNTYN
CHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCEEECCCCCCCC
ARTLNLFLKQGMTRWCMPVELSREWLSNVMKQCEELNIRNKFEVEVFSHGYLPLAYSARC
CHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCEE
FTARAENKAKDDCETCCIKYPTGLQVESQEGQSVFNLNGIQTQSGYCYNLVNDLPSMHDL
EEECCCCCCCHHHHHHEEECCCCCEEECCCCCEEEEECCEECCCCCHHHHHHCCCHHHHH
VDVVRLSPWGIDTFSEINNFRANEQGQKPMKIESRQCNGYWHQLAGLDVKNI
HHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MKYALGPLLYFWPKQDVESFYEQAKSSSADIIYLGEAVCSKRREMKAKHWMDIAKELSDS
CCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
GKQVVLSTMALLEAPSEVNIMKKYIDNGDFAIEANDVSAIQLASESKVPFVVGPAVNTYN
CHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCEEECCCCCCCC
ARTLNLFLKQGMTRWCMPVELSREWLSNVMKQCEELNIRNKFEVEVFSHGYLPLAYSARC
CHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCEE
FTARAENKAKDDCETCCIKYPTGLQVESQEGQSVFNLNGIQTQSGYCYNLVNDLPSMHDL
EEECCCCCCCHHHHHHEEECCCCCEEECCCCCEEEEECCEECCCCCHHHHHHCCCHHHHH
VDVVRLSPWGIDTFSEINNFRANEQGQKPMKIESRQCNGYWHQLAGLDVKNI
HHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]