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The map label for this gene is ahpA [H]

Identifier: 218710422

GI number: 218710422

Start: 2629556

End: 2630167

Strand: Direct

Name: ahpA [H]

Synonym: VS_2459

Alternate gene names: 218710422

Gene position: 2629556-2630167 (Clockwise)

Preceding gene: 218710420

Following gene: 218710435

Centisome position: 79.7

GC content: 44.12

Gene sequence:

>612_bases
ATGAATGAATCATTGTTCTCAATACGTAACGCTTTACGAGTACTAGCCCTAATTCTGTTGGCTGCTATGTTCGTGGTAAC
CATTAAAAACACAGTAGTGATCAGTAAAGGTAATGAGAAGATCCAAGCAAAACAGTTGGAAACGCTGACCAAACTACTGA
TCTCACAGGCATCACTTTCAGCCAGTAAGATGATCACTCAGCAAGACCAAGAGCGCCTACTAGAGCTCACTAACCAACTC
TCTCAGGATCGATTGGTATTTGATACCACCATCTACGATGCAGAAGGGATTCGACTGGCTTCGAGTGAAAAAGCGCTCTC
GGTACGCGAAGTTCTTGGCTTAGACACACCTCTTTCAACGGCAAGTATCGGCAGGCAGCAACTCGTTGAACCTATTTACT
CTCCAGAGAGTACGATCATTGGCTTTATCCGCGTGACTTTTGAGACAGGAAAAATGACAGCTATTTCTGACCATCACTAC
CGTAAGAGCGATCGCTACATGATCGGTATGGTCTTAATGGGGTTTGTCAGTGGCGTGTTGTTCATCATGCTTATTCGTAA
AAGAAAGGCTAAGTCTGGGGAAAACTGGCTGCTTAAAAATGTCAGCTCTTAA

Upstream 100 bases:

>100_bases
TCCTAATTAACTATGCTAAACGTTAACCTATTGCAATTTGAAAACGCAAGTCTCAATATGTCTTAATCATAACATTTGTT
TATTTCAGGCTTCGTGAAAC

Downstream 100 bases:

>100_bases
CAGCTTATACCAATCACAGTAAGTAAGTGATCAGAAATAGCGCAGGAAAAAGGCTTGAGAACAAGGCGTGATTTTCTGAT
AAGTAGTTATTCTACAATCA

Product: putative smp protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MNESLFSIRNALRVLALILLAAMFVVTIKNTVVISKGNEKIQAKQLETLTKLLISQASLSASKMITQQDQERLLELTNQL
SQDRLVFDTTIYDAEGIRLASSEKALSVREVLGLDTPLSTASIGRQQLVEPIYSPESTIIGFIRVTFETGKMTAISDHHY
RKSDRYMIGMVLMGFVSGVLFIMLIRKRKAKSGENWLLKNVSS

Sequences:

>Translated_203_residues
MNESLFSIRNALRVLALILLAAMFVVTIKNTVVISKGNEKIQAKQLETLTKLLISQASLSASKMITQQDQERLLELTNQL
SQDRLVFDTTIYDAEGIRLASSEKALSVREVLGLDTPLSTASIGRQQLVEPIYSPESTIIGFIRVTFETGKMTAISDHHY
RKSDRYMIGMVLMGFVSGVLFIMLIRKRKAKSGENWLLKNVSS
>Mature_203_residues
MNESLFSIRNALRVLALILLAAMFVVTIKNTVVISKGNEKIQAKQLETLTKLLISQASLSASKMITQQDQERLLELTNQL
SQDRLVFDTTIYDAEGIRLASSEKALSVREVLGLDTPLSTASIGRQQLVEPIYSPESTIIGFIRVTFETGKMTAISDHHY
RKSDRYMIGMVLMGFVSGVLFIMLIRKRKAKSGENWLLKNVSS

Specific function: Effects the expression of the latent E.coli K12 hemolysin sheA under anaerobic conditions [H]

COG id: COG3726

COG function: function code R; Uncharacterized membrane protein affecting hemolysin expression

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smp family [H]

Homologues:

Organism=Escherichia coli, GI1790847, Length=139, Percent_Identity=25.8992805755396, Blast_Score=60, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019305 [H]

Pfam domain/function: PF10144 SMP_2 [H]

EC number: NA

Molecular weight: Translated: 22697; Mature: 22697

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNESLFSIRNALRVLALILLAAMFVVTIKNTVVISKGNEKIQAKQLETLTKLLISQASLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
ASKMITQQDQERLLELTNQLSQDRLVFDTTIYDAEGIRLASSEKALSVREVLGLDTPLST
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHCCCCCCCH
ASIGRQQLVEPIYSPESTIIGFIRVTFETGKMTAISDHHYRKSDRYMIGMVLMGFVSGVL
HHHHHHHHHHHHHCCCHHEEEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
FIMLIRKRKAKSGENWLLKNVSS
HHHHHHHHHCCCCCCHHHCCCCC
>Mature Secondary Structure
MNESLFSIRNALRVLALILLAAMFVVTIKNTVVISKGNEKIQAKQLETLTKLLISQASLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
ASKMITQQDQERLLELTNQLSQDRLVFDTTIYDAEGIRLASSEKALSVREVLGLDTPLST
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHCCCCCCCH
ASIGRQQLVEPIYSPESTIIGFIRVTFETGKMTAISDHHYRKSDRYMIGMVLMGFVSGVL
HHHHHHHHHHHHHCCCHHEEEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
FIMLIRKRKAKSGENWLLKNVSS
HHHHHHHHHCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10699510; 11248100 [H]