| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710276
Identifier: 218710276
GI number: 218710276
Start: 2477760
End: 2477999
Strand: Reverse
Name: 218710276
Synonym: VS_2310
Alternate gene names: NA
Gene position: 2477999-2477760 (Counterclockwise)
Preceding gene: 218710281
Following gene: 218710275
Centisome position: 75.11
GC content: 38.75
Gene sequence:
>240_bases ATGACACCTAATATTCTAGATTTACGCCAAGAGCGCTGTCCAATGGCACTATTATTAGCCAAGCGTCACAGTGTAAAGTT AGAAGTAGGGCAATCATTGTCAATTTATGTCTCTGATAACAGCTCGATGAAAGATATTGTTACTTTTTTGTCTAAGCAAG CCTATGACGTCATCGTAGAGGTTTGCTCTAATTACCATCATCTCCTCGTCACTAAAAAGGAATTGCAGTCAAATGCTTGA
Upstream 100 bases:
>100_bases ACCAAGTGCGTGCGCTATCATGAAGGAAGATGAATGAATGATGGCGCGTTTTCAAAAACAGATTACAATACGACCCTTAT AATAAGCATCGAGCTAAAGA
Downstream 100 bases:
>100_bases AATGGTCAATCGTTGGTATAAACGACGTTTCTCTGATCCCCATGCTGTCAGCTTGGTTGCCATCATTCTCTTCGGCTTTA TAACGATCTACTTCTTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MTPNILDLRQERCPMALLLAKRHSVKLEVGQSLSIYVSDNSSMKDIVTFLSKQAYDVIVEVCSNYHHLLVTKKELQSNA
Sequences:
>Translated_79_residues MTPNILDLRQERCPMALLLAKRHSVKLEVGQSLSIYVSDNSSMKDIVTFLSKQAYDVIVEVCSNYHHLLVTKKELQSNA >Mature_78_residues TPNILDLRQERCPMALLLAKRHSVKLEVGQSLSIYVSDNSSMKDIVTFLSKQAYDVIVEVCSNYHHLLVTKKELQSNA
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8963; Mature: 8831
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPNILDLRQERCPMALLLAKRHSVKLEVGQSLSIYVSDNSSMKDIVTFLSKQAYDVIVE CCCCCCHHHHHHCCHHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH VCSNYHHLLVTKKELQSNA HHCCCCEEEEEHHHHCCCC >Mature Secondary Structure TPNILDLRQERCPMALLLAKRHSVKLEVGQSLSIYVSDNSSMKDIVTFLSKQAYDVIVE CCCCCHHHHHHCCHHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH VCSNYHHLLVTKKELQSNA HHCCCCEEEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA