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The map label for this gene is nlpB [H]

Identifier: 218710271

GI number: 218710271

Start: 2473177

End: 2474223

Strand: Reverse

Name: nlpB [H]

Synonym: VS_2304

Alternate gene names: 218710271

Gene position: 2474223-2473177 (Counterclockwise)

Preceding gene: 218710272

Following gene: 218710266

Centisome position: 74.99

GC content: 46.51

Gene sequence:

>1047_bases
ATGAAGTATTCTCACCAGCTAGTGATCGGTTCACTGGCTGTTTTCGTTCTTACAGCATGTTCTGGCAGCCCGACTCAACG
TCGCCAAGCCAAAGATGATTTTGAATACTTAGAAACACCTGAGTTTTCACAATGGCAATTGCCTGAAGATGCTCAGCCTC
AGTTTTACCCAAACTTTGATATCCCAAGCGGTGAATTCAGTGGTGGTACCGGTCGTCAAGTGGATATTCGTCCTCCTCAA
CAGGTTCTTGAACTGATCCCAGGTGCTCGTACTGAGCGTCAAAATGGTGAAGTGACGTTATGGCTCCTTCGTGCTGAAGA
GGCTGACCGAGTATGGCAAACGGCTGTAGATATGCTGACCCAGCGTAATATCGGCATTCGTGAACAGTCAGAAAATGACA
TTGAGACTGATTGGGTTACGTGGGTTTCTGAAGATGAAGAAGTTGAGATTGGTAGCCGCTACTCTATCTCACGTTTTCAG
GCGAACAATCGCCATGGTTTCAAGATTAACCTGATTGATTGGCGTGAAGGTTCTGAAGAGAAGCCAGTATCGGCAACCAA
TAAAGAACGCTACAACGCGTTCCTAACGAACCTAGTGATGGCGAGATACGATGCAGATCTTCGTGCTGAAGCGGCACTGA
AAGCACAAGAGTTGGTGAAACGTATTCCTATTTCAATGGGGTCGGACCGCAGTGGTTTCCCTGTGATCATTGCTCGTACA
CCATACAATGTATTGTGGCAACGTCTACCTACCTTGCTACCGACGATGGGCTTCGAACTTGAAGAGCGTAACCAGTCTCA
AGGTACAGTGAAAGCTAAGTATGCCGCGCCAGATGATGAATTCTGGGAAGAGATTGGCCTACAGCCTATTGACTTAGCTC
CAGGTACTTACACCTTCTTGTTTGGTGATCTTGGCAACCGTACATCGATTAACGTAACGGATGCATCAGGTAAGCCTGTA
GAAGAAGAGCTACTTAAGTCAATGGTACCGGTATTGGCACACGTTGCAGACCAAACCAAAGACAAGAAAGAAGCAAAATC
TGAATAA

Upstream 100 bases:

>100_bases
CCAGCTCAACCTGTTGTTGCTCAAGCAATGACTGAAGCGTGCATTTACTAAAAACGTATAAAGCAATGCCGAAGCGAACC
TTCGGCATTTAGGAGTATAA

Downstream 100 bases:

>100_bases
GCCCTGAGCAAATTTAGAAGAAAAAAAAGAGGACATACAATGTCCTCTTTTTTATGTTTGTTAGTCAGTGTTTTATGTGC
CTGTTGTCAATTTATTTTGT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MKYSHQLVIGSLAVFVLTACSGSPTQRRQAKDDFEYLETPEFSQWQLPEDAQPQFYPNFDIPSGEFSGGTGRQVDIRPPQ
QVLELIPGARTERQNGEVTLWLLRAEEADRVWQTAVDMLTQRNIGIREQSENDIETDWVTWVSEDEEVEIGSRYSISRFQ
ANNRHGFKINLIDWREGSEEKPVSATNKERYNAFLTNLVMARYDADLRAEAALKAQELVKRIPISMGSDRSGFPVIIART
PYNVLWQRLPTLLPTMGFELEERNQSQGTVKAKYAAPDDEFWEEIGLQPIDLAPGTYTFLFGDLGNRTSINVTDASGKPV
EEELLKSMVPVLAHVADQTKDKKEAKSE

Sequences:

>Translated_348_residues
MKYSHQLVIGSLAVFVLTACSGSPTQRRQAKDDFEYLETPEFSQWQLPEDAQPQFYPNFDIPSGEFSGGTGRQVDIRPPQ
QVLELIPGARTERQNGEVTLWLLRAEEADRVWQTAVDMLTQRNIGIREQSENDIETDWVTWVSEDEEVEIGSRYSISRFQ
ANNRHGFKINLIDWREGSEEKPVSATNKERYNAFLTNLVMARYDADLRAEAALKAQELVKRIPISMGSDRSGFPVIIART
PYNVLWQRLPTLLPTMGFELEERNQSQGTVKAKYAAPDDEFWEEIGLQPIDLAPGTYTFLFGDLGNRTSINVTDASGKPV
EEELLKSMVPVLAHVADQTKDKKEAKSE
>Mature_348_residues
MKYSHQLVIGSLAVFVLTACSGSPTQRRQAKDDFEYLETPEFSQWQLPEDAQPQFYPNFDIPSGEFSGGTGRQVDIRPPQ
QVLELIPGARTERQNGEVTLWLLRAEEADRVWQTAVDMLTQRNIGIREQSENDIETDWVTWVSEDEEVEIGSRYSISRFQ
ANNRHGFKINLIDWREGSEEKPVSATNKERYNAFLTNLVMARYDADLRAEAALKAQELVKRIPISMGSDRSGFPVIIART
PYNVLWQRLPTLLPTMGFELEERNQSQGTVKAKYAAPDDEFWEEIGLQPIDLAPGTYTFLFGDLGNRTSINVTDASGKPV
EEELLKSMVPVLAHVADQTKDKKEAKSE

Specific function: Non-essential lipoprotein [H]

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=341, Percent_Identity=29.9120234604106, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010653
- InterPro:   IPR014524 [H]

Pfam domain/function: PF06804 Lipoprotein_18 [H]

EC number: NA

Molecular weight: Translated: 39476; Mature: 39476

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSHQLVIGSLAVFVLTACSGSPTQRRQAKDDFEYLETPEFSQWQLPEDAQPQFYPNFD
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
IPSGEFSGGTGRQVDIRPPQQVLELIPGARTERQNGEVTLWLLRAEEADRVWQTAVDMLT
CCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
QRNIGIREQSENDIETDWVTWVSEDEEVEIGSRYSISRFQANNRHGFKINLIDWREGSEE
HCCCCCCCCCCCCCCCHHEEEECCCCCEECCCCCEEHHHCCCCCCCEEEEEEECCCCCCC
KPVSATNKERYNAFLTNLVMARYDADLRAEAALKAQELVKRIPISMGSDRSGFPVIIART
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
PYNVLWQRLPTLLPTMGFELEERNQSQGTVKAKYAAPDDEFWEEIGLQPIDLAPGTYTFL
CHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCHHHHHHHCCCEEECCCCCEEEE
FGDLGNRTSINVTDASGKPVEEELLKSMVPVLAHVADQTKDKKEAKSE
EECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYSHQLVIGSLAVFVLTACSGSPTQRRQAKDDFEYLETPEFSQWQLPEDAQPQFYPNFD
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
IPSGEFSGGTGRQVDIRPPQQVLELIPGARTERQNGEVTLWLLRAEEADRVWQTAVDMLT
CCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
QRNIGIREQSENDIETDWVTWVSEDEEVEIGSRYSISRFQANNRHGFKINLIDWREGSEE
HCCCCCCCCCCCCCCCHHEEEECCCCCEECCCCCEEHHHCCCCCCCEEEEEEECCCCCCC
KPVSATNKERYNAFLTNLVMARYDADLRAEAALKAQELVKRIPISMGSDRSGFPVIIART
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
PYNVLWQRLPTLLPTMGFELEERNQSQGTVKAKYAAPDDEFWEEIGLQPIDLAPGTYTFL
CHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCHHHHHHHCCCEEECCCCCEEEE
FGDLGNRTSINVTDASGKPVEEELLKSMVPVLAHVADQTKDKKEAKSE
EECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1885529; 2120198; 9205837; 9278503 [H]