| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218710266
Identifier: 218710266
GI number: 218710266
Start: 2470000
End: 2470293
Strand: Reverse
Name: 218710266
Synonym: VS_2299
Alternate gene names: NA
Gene position: 2470293-2470000 (Counterclockwise)
Preceding gene: 218710271
Following gene: 218710263
Centisome position: 74.87
GC content: 44.9
Gene sequence:
>294_bases GTGTCAATGGAGTTGAGTCCTGTTTTTGCAAGGCGGCTATATTTAGCATTGTTAGTGGAAAGCCTTGATAGGCCAAATGT GCCGAAACTCATCGAAAAAACGGGGTGGCCTCGTCGTACTATTCAAGATGTACTCAAGGCGTTACCGGGGATCGGTATTG AACTTATGTTTGTTCAAGATGGGCGACGTCATAATGATGGCTATTACCAATTATCCGACTGGGGGCCATTTGACAGTCAA TGGGTTATCCAGCGTAAAGGCGATATAGCAACAAGCCTTGGATTTAGTGCATAA
Upstream 100 bases:
>100_bases AAAAAAAACAGTAAGAAAATGTCACTATTGGAGACTTATTGATCAGCCTCAACATGTTGTCAGCAAAAAAAGAAATAATT GAGTTGCACATATATAGGAG
Downstream 100 bases:
>100_bases GCCAGCGAAAGCTGGCTTTCTTCTTTCTTCTTTCTTCTTTCTTCTCCTTACCGATTACCGATTACCGATTACCGATTACC GATTACCGATAAGTCGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSMELSPVFARRLYLALLVESLDRPNVPKLIEKTGWPRRTIQDVLKALPGIGIELMFVQDGRRHNDGYYQLSDWGPFDSQ WVIQRKGDIATSLGFSA
Sequences:
>Translated_97_residues MSMELSPVFARRLYLALLVESLDRPNVPKLIEKTGWPRRTIQDVLKALPGIGIELMFVQDGRRHNDGYYQLSDWGPFDSQ WVIQRKGDIATSLGFSA >Mature_96_residues SMELSPVFARRLYLALLVESLDRPNVPKLIEKTGWPRRTIQDVLKALPGIGIELMFVQDGRRHNDGYYQLSDWGPFDSQW VIQRKGDIATSLGFSA
Specific function: Unknown
COG id: COG4519
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11078; Mature: 10947
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMELSPVFARRLYLALLVESLDRPNVPKLIEKTGWPRRTIQDVLKALPGIGIELMFVQD CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECC GRRHNDGYYQLSDWGPFDSQWVIQRKGDIATSLGFSA CCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure SMELSPVFARRLYLALLVESLDRPNVPKLIEKTGWPRRTIQDVLKALPGIGIELMFVQD CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECC GRRHNDGYYQLSDWGPFDSQWVIQRKGDIATSLGFSA CCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA