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The map label for this gene is yeaY [H]

Identifier: 218710190

GI number: 218710190

Start: 2388055

End: 2388615

Strand: Reverse

Name: yeaY [H]

Synonym: VS_2222

Alternate gene names: 218710190

Gene position: 2388615-2388055 (Counterclockwise)

Preceding gene: 218710191

Following gene: 218710189

Centisome position: 72.4

GC content: 42.42

Gene sequence:

>561_bases
ATGTATTCTCTCATATCTAAATCTCGCTTATTTTTCCTTGTCGCTTTCTCTACGATGGTGATGGGGTGCTCCTCTTTACC
TAAAGAACTTAATGCAAACTCAGAACAGGTGGTAACTGACTACCAAGAGTGGGTAAACACACTACCGGATGCCGGTGATG
TTCGTTTGGGTGGCGTGATTGCTAAAGTCACTAATCTGAAAGATAAAACGCGTGTTGAAGTGGTGAACTTACCTATCTCT
AGTAGTGGTAAGCCTGATATTGATGCCGAACCAAAAGGACGTTTTGTTGGTTACATTGACGGCTATGTTGAACCATTGAG
CTTTGCTGAGGGTCGTTTAGTTACTTTAGTTGGCACATCAAATAGCACTGAAGACGGTATGGTTGGTGAATACCCTTACA
CTTTCCCAGTCATGAATGTCTACAATCAACGTTTATGGCAGATCACTGAAAGAGTGGTTATTAATGACTTTGCGCCAACT
TACTACTCTTGCCGCAGTTTACATTGTCGCAGTTTTCAAACCATGCCTAAGTCAGGGCGTGTGATTCAAGATGTGCAATA
G

Upstream 100 bases:

>100_bases
GATGAATCAAGCTAAAAAAGAGGAACTTGCAAAGCTAATTGGGGTCGATATTTATATCTAGCTTTGTGTTTTCATTTATC
CTGCTCTAAGGAGCTGCATT

Downstream 100 bases:

>100_bases
TCGAACCTTAACTCGACATACCCAATGACAGGGACACCATACTATCAATGATTGAACAGTCATATTCCCTTGCGAGCGGG
ACACTTGCAACACAACAGAT

Product: outer membrane lipoprotein Slp family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MYSLISKSRLFFLVAFSTMVMGCSSLPKELNANSEQVVTDYQEWVNTLPDAGDVRLGGVIAKVTNLKDKTRVEVVNLPIS
SSGKPDIDAEPKGRFVGYIDGYVEPLSFAEGRLVTLVGTSNSTEDGMVGEYPYTFPVMNVYNQRLWQITERVVINDFAPT
YYSCRSLHCRSFQTMPKSGRVIQDVQ

Sequences:

>Translated_186_residues
MYSLISKSRLFFLVAFSTMVMGCSSLPKELNANSEQVVTDYQEWVNTLPDAGDVRLGGVIAKVTNLKDKTRVEVVNLPIS
SSGKPDIDAEPKGRFVGYIDGYVEPLSFAEGRLVTLVGTSNSTEDGMVGEYPYTFPVMNVYNQRLWQITERVVINDFAPT
YYSCRSLHCRSFQTMPKSGRVIQDVQ
>Mature_186_residues
MYSLISKSRLFFLVAFSTMVMGCSSLPKELNANSEQVVTDYQEWVNTLPDAGDVRLGGVIAKVTNLKDKTRVEVVNLPIS
SSGKPDIDAEPKGRFVGYIDGYVEPLSFAEGRLVTLVGTSNSTEDGMVGEYPYTFPVMNVYNQRLWQITERVVINDFAPT
YYSCRSLHCRSFQTMPKSGRVIQDVQ

Specific function: Unknown

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788108, Length=157, Percent_Identity=29.9363057324841, Blast_Score=87, Evalue=5e-19,
Organism=Escherichia coli, GI87082278, Length=144, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 20798; Mature: 20798

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSLISKSRLFFLVAFSTMVMGCSSLPKELNANSEQVVTDYQEWVNTLPDAGDVRLGGVI
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCCCEEECHHH
AKVTNLKDKTRVEVVNLPISSSGKPDIDAEPKGRFVGYIDGYVEPLSFAEGRLVTLVGTS
HHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECC
NSTEDGMVGEYPYTFPVMNVYNQRLWQITERVVINDFAPTYYSCRSLHCRSFQTMPKSGR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
VIQDVQ
EECCCC
>Mature Secondary Structure
MYSLISKSRLFFLVAFSTMVMGCSSLPKELNANSEQVVTDYQEWVNTLPDAGDVRLGGVI
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCCCEEECHHH
AKVTNLKDKTRVEVVNLPISSSGKPDIDAEPKGRFVGYIDGYVEPLSFAEGRLVTLVGTS
HHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECC
NSTEDGMVGEYPYTFPVMNVYNQRLWQITERVVINDFAPTYYSCRSLHCRSFQTMPKSGR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
VIQDVQ
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]