Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710189

Identifier: 218710189

GI number: 218710189

Start: 2387156

End: 2388007

Strand: Reverse

Name: 218710189

Synonym: VS_2221

Alternate gene names: NA

Gene position: 2388007-2387156 (Counterclockwise)

Preceding gene: 218710190

Following gene: 218710188

Centisome position: 72.38

GC content: 44.95

Gene sequence:

>852_bases
ATGATTGAACAGTCATATTCCCTTGCGAGCGGGACACTTGCAACACAACAGATTGGCAACCCACAAACGACCGTAACGAC
GGTCGTTTTTATTCATGGCTGGCTAGACAATTCCGCAAGTTTTACTCAGGTCATGCAGCAAGTCTCTAAGCTTTCTTCAG
ATACTCACTTAGTTGCGATCGATCTTTTTGGGCACGGTTACTCGTCGCATAAGTCGGGGAGTTACTACCCATTTCACGAC
TATATTGATGATTTACACCAGCTAGTGACCAAATTATCGCCAAACGGACTGGTACTGGTAGGACATTCACTTGGTGCATT
GATAGCAAGTTGCTATAGTGCCGCCTTTCCTGAAAAGGTGTCAGGATTAATTCAAATTGAAGGTCACGGACCTCTTTCTG
AAGCTCCCCACGAAACAGTCTCTCGCTTGAGGGATGGGGTACTTAGTCGTCTTCGACAGCGAAGAAAGCCTTCACGTCCT
CTGGCAAGCCTTGAGGATGCTATTAAGCTGAGAGCTTACGCCAACCAAATTAATGCTGAATTAATCGCTCCTATTGTTGA
GCGAGGTATTGTCGAGTTTGAGAACTCTTGGCAATGGCGATGCGACCCTAATCTAAAATGTGACTCGTTATATCGAATGT
CACAGGCGCACGCTGAAGCGATCATGGCGGCTATTGAATGCCCTCAATTAATAATCCTAGGGAATGATGGATACCGACAT
TTGCAGCATAATCGCTACAAATCAGCGCATAGTCCTCTAAATATAGAGACGATTCCTGGCGGACATCATTGTCATTTAGA
GAGCCCAGAGCTAGTTTCAGAGCTAATTCTTGGTGTAGTTAACAAAATTTAA

Upstream 100 bases:

>100_bases
GCAGTTTTCAAACCATGCCTAAGTCAGGGCGTGTGATTCAAGATGTGCAATAGTCGAACCTTAACTCGACATACCCAATG
ACAGGGACACCATACTATCA

Downstream 100 bases:

>100_bases
ACAAGTGTTTGAGCCTTTTAGTGCTCATGCACTAAAGCTGTGCTGTAATACCGCAATGATAAAAAGCGGCGAAGCAGTCG
TCAGCTGATAAACGAGGAGT

Product: putative hydrolase

Products: NA

Alternate protein names: Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold Protein; Hydrolase/Acyltransferase; Lipase A; Lipase; Hydrolase Protein; Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Hydrolase Family Protein; Lipase LipA; Hydrolase Alpha/Beta Fold Family Protein; Epoxide Hydrolase; Alpha/Beta Superfamily Hydrolase; Alpha/Beta Fold Hydrolase Family Protein

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MIEQSYSLASGTLATQQIGNPQTTVTTVVFIHGWLDNSASFTQVMQQVSKLSSDTHLVAIDLFGHGYSSHKSGSYYPFHD
YIDDLHQLVTKLSPNGLVLVGHSLGALIASCYSAAFPEKVSGLIQIEGHGPLSEAPHETVSRLRDGVLSRLRQRRKPSRP
LASLEDAIKLRAYANQINAELIAPIVERGIVEFENSWQWRCDPNLKCDSLYRMSQAHAEAIMAAIECPQLIILGNDGYRH
LQHNRYKSAHSPLNIETIPGGHHCHLESPELVSELILGVVNKI

Sequences:

>Translated_283_residues
MIEQSYSLASGTLATQQIGNPQTTVTTVVFIHGWLDNSASFTQVMQQVSKLSSDTHLVAIDLFGHGYSSHKSGSYYPFHD
YIDDLHQLVTKLSPNGLVLVGHSLGALIASCYSAAFPEKVSGLIQIEGHGPLSEAPHETVSRLRDGVLSRLRQRRKPSRP
LASLEDAIKLRAYANQINAELIAPIVERGIVEFENSWQWRCDPNLKCDSLYRMSQAHAEAIMAAIECPQLIILGNDGYRH
LQHNRYKSAHSPLNIETIPGGHHCHLESPELVSELILGVVNKI
>Mature_283_residues
MIEQSYSLASGTLATQQIGNPQTTVTTVVFIHGWLDNSASFTQVMQQVSKLSSDTHLVAIDLFGHGYSSHKSGSYYPFHD
YIDDLHQLVTKLSPNGLVLVGHSLGALIASCYSAAFPEKVSGLIQIEGHGPLSEAPHETVSRLRDGVLSRLRQRRKPSRP
LASLEDAIKLRAYANQINAELIAPIVERGIVEFENSWQWRCDPNLKCDSLYRMSQAHAEAIMAAIECPQLIILGNDGYRH
LQHNRYKSAHSPLNIETIPGGHHCHLESPELVSELILGVVNKI

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI18777795, Length=291, Percent_Identity=24.0549828178694, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17137390, Length=291, Percent_Identity=28.5223367697594, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI21357291, Length=287, Percent_Identity=27.1777003484321, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24667992, Length=287, Percent_Identity=27.1777003484321, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24655874, Length=293, Percent_Identity=24.9146757679181, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31276; Mature: 31276

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQSYSLASGTLATQQIGNPQTTVTTVVFIHGWLDNSASFTQVMQQVSKLSSDTHLVAI
CCCCCCCHHCCCHHHHHCCCCCHHHEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE
DLFGHGYSSHKSGSYYPFHDYIDDLHQLVTKLSPNGLVLVGHSLGALIASCYSAAFPEKV
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCHHHC
SGLIQIEGHGPLSEAPHETVSRLRDGVLSRLRQRRKPSRPLASLEDAIKLRAYANQINAE
CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LIAPIVERGIVEFENSWQWRCDPNLKCDSLYRMSQAHAEAIMAAIECPQLIILGNDGYRH
HHHHHHHHCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH
LQHNRYKSAHSPLNIETIPGGHHCHLESPELVSELILGVVNKI
HHHHHHHCCCCCCEEEECCCCCEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEQSYSLASGTLATQQIGNPQTTVTTVVFIHGWLDNSASFTQVMQQVSKLSSDTHLVAI
CCCCCCCHHCCCHHHHHCCCCCHHHEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE
DLFGHGYSSHKSGSYYPFHDYIDDLHQLVTKLSPNGLVLVGHSLGALIASCYSAAFPEKV
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCHHHC
SGLIQIEGHGPLSEAPHETVSRLRDGVLSRLRQRRKPSRPLASLEDAIKLRAYANQINAE
CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LIAPIVERGIVEFENSWQWRCDPNLKCDSLYRMSQAHAEAIMAAIECPQLIILGNDGYRH
HHHHHHHHCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH
LQHNRYKSAHSPLNIETIPGGHHCHLESPELVSELILGVVNKI
HHHHHHHCCCCCCEEEECCCCCEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA