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The map label for this gene is ybgC [C]

Identifier: 218710181

GI number: 218710181

Start: 2364560

End: 2364976

Strand: Direct

Name: ybgC [C]

Synonym: VS_2213

Alternate gene names: 218710181

Gene position: 2364560-2364976 (Clockwise)

Preceding gene: 218710177

Following gene: 218710183

Centisome position: 71.67

GC content: 43.65

Gene sequence:

>417_bases
TTGATATCAATGAGCCAGATCTACCATCACCCAGTACAAATTTACTATGAAGATACCGATCACTCAGGTGTGGTTTATCA
CCCTAACTTTCTAAAGTACTTTGAGCGTGCGCGCGAACATGTATTGGGTAGCGATAAACTGGCAACATTGTGGAATGAAC
ATGGATTAGGTTTTGCGGTCTATAAAGCCAACATGACTTTTCAAGATGGGGTTGAGTTCGCTGAGATCTGCGACATCCGA
ACCTCTTTTGAACTCGATGGAAAATACAAAACCTTATGGCGACAAGAGGTATGGCGTAAAGATGCGACTAAGCCTGCCGT
GATTGGTGATATTGAAATGGTCTGCCTTGATAAAGACAAGCAACTGCAGCCAGTGCCTGCTGAAGTATTAAAAGCGATGC
TTGGCGAAACGAGCTAA

Upstream 100 bases:

>100_bases
CAAAAGCTCGATAGTCGATGATGCCTTGAAGTAATTTCTACCTATCCTGTAGAGTGCTGCACAACTTAGTCAGATTTACT
ACAACGCTACTTAATAAGAG

Downstream 100 bases:

>100_bases
CTTTATTTTATCTACATAGACGTAAAGAGATGAGACGGCGAAAAGCTTCTCATCTCTATCTGCATGGGTAACAAATGACC
ACCAAGAGTCACGGCGAAAC

Product: putative thioesterase

Products: NA

Alternate protein names: 4-Hydroxybenzoyl-CoA Thioesterase; L-Pal System-Associated Acyl-CoA Thioesterase; Thioesterase Superfamily; Thioesterase; Thioesterase Family Protein

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MISMSQIYHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVLGSDKLATLWNEHGLGFAVYKANMTFQDGVEFAEICDIR
TSFELDGKYKTLWRQEVWRKDATKPAVIGDIEMVCLDKDKQLQPVPAEVLKAMLGETS

Sequences:

>Translated_138_residues
MISMSQIYHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVLGSDKLATLWNEHGLGFAVYKANMTFQDGVEFAEICDIR
TSFELDGKYKTLWRQEVWRKDATKPAVIGDIEMVCLDKDKQLQPVPAEVLKAMLGETS
>Mature_138_residues
MISMSQIYHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVLGSDKLATLWNEHGLGFAVYKANMTFQDGVEFAEICDIR
TSFELDGKYKTLWRQEVWRKDATKPAVIGDIEMVCLDKDKQLQPVPAEVLKAMLGETS

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15971; Mature: 15971

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISMSQIYHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVLGSDKLATLWNEHGLGFAV
CCCHHHHHCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEE
YKANMTFQDGVEFAEICDIRTSFELDGKYKTLWRQEVWRKDATKPAVIGDIEMVCLDKDK
EEECCCHHHCCCHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCC
QLQPVPAEVLKAMLGETS
CCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MISMSQIYHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVLGSDKLATLWNEHGLGFAV
CCCHHHHHCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEE
YKANMTFQDGVEFAEICDIRTSFELDGKYKTLWRQEVWRKDATKPAVIGDIEMVCLDKDK
EEECCCHHHCCCHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCC
QLQPVPAEVLKAMLGETS
CCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA