| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is nagE [H]
Identifier: 218710156
GI number: 218710156
Start: 2334097
End: 2335560
Strand: Direct
Name: nagE [H]
Synonym: VS_2186
Alternate gene names: 218710156
Gene position: 2334097-2335560 (Clockwise)
Preceding gene: 218710153
Following gene: 218710163
Centisome position: 70.75
GC content: 47.54
Gene sequence:
>1464_bases ATGAATATACTTGGGTATATGCAAAAAGTAGGTAAGGCATTGATGGTTCCCGTAGCCACACTGCCAGCTGCAGCAATCCT TATGGGGATCGGCTACTGGTTGGATCCTGTTGGTTGGGGTTCTGAAAGTATCCTAGCCGCATTCTTGATCAAATCAGGTG GTGCGATCATCGACAACATGGCGGTTCTGTTCGCGGTGGGTGTCGCATTTGGTTTAAGCCGTGATAAGAATGGTTCTGCG GCACTGTCCGGTTTTGTGATGTTCCTTGTCGTGACCACTCTACTGGCTCCAGGCTCAGTTGCTCAATTGATGGATGTTGA GTTAAGTGAAGTACCAGCGGCATTCGGAAAAATCAGCAACCAATTCGTGGGTATCATTGTCGGTATCATTTCCGCTGAGA TCTACAACCGCTACTCAACGGTTGAGCTTCCTCAAGCTTTAGCGTTCTTCAGCGGTAAGCGTTTGGTTCCTATCCTTACC TCAATCGCAGGTATGGCGCTCTCTTTTGCTCTGCTATACATCTGGCCTGCTGTTTACGATGCTCTGATCGTTCTAGGAAT TAAACTAGAAAGCATGGGCGCTGTGGGTGCCGGTCTGTTTGGTTTCTTCAACCGTTTGTTCCTATCCGTTGGTATGCACC ACGCACTTTACCCAGTGTTCTGGTTCGACGTTGTAGGTATTAACGATATTCCAAACTTCCTCGGCGGTGCACAATCTATC GCTAACGGTACGGGTATTCCGGGTAAAACAGGTATGTACCAAGCGGGCTTCTTCCCTATCATGATGTTTGGTCTACCAGC AGCAGCATTGGCGATGTACCACTGCTCTGATGCGAAAAACAAGAACCAAGTCTTCGCAATCATGCTTGCCGCAGCAATGG CTTCATTCTTCACTGGCATTACTGAGCCTCTAGAGTTCAGTTTCATGTTCCTAGCACCTGTATTGTTCCTATTGCACGCA GTGTTAACAGGTTTGTCGCTTTACATTGCAGCAAGCATGGAATGGATGGCAGGCTTCGGCTTCTCTGCAGGCTTTGTTGA CTTGGTGCTATCAAGCCAAAACCCGTTAGCGACTAACTGGTACATGTTATTAGTTCAAGGTGTGGTGTTCTTCGCGCTTT ACTACGGTATTTTCCGTTTCGCTATCATCAAGTTCAATCTCCGTACTCCGGGTCGTGGTGAAGAGATGGAAGCAGAAGGC GAGGCCGAATCTCCAGAAGCGTTAATTAGCCTAACCAACAACTACATCGAAGCTATTGGTGGTGCAGGCAACATTCTAGA AGTCGACAACTGTATTACTCGCTTACGCTTAACAGTAAAAGACTCGTCAGCAGCAGACAGTGACAAACTGAAAAAACTAG GTGCTGCAGGCGTCGTTCCTATCGGAAAAGGTGGCCTGCAAGTCATTATCGGTTTAGGTAAGGTAGATAGGGTTGCTGAA CAAATGAAGAAGGCACTCGCTTAA
Upstream 100 bases:
>100_bases ATAGCCGCAGTTACTTAAAATCCTGCCTCGATCAATATTTAACTCCATACGTTGACGAGCAGAAACATTAAAAAAATTAA TTACAAACTTAGGGGCACGT
Downstream 100 bases:
>100_bases GCTAAACAGCCAGATGCAAAGATAAAAGCCTTAATGACCACATAGAATATTAAAAATTTGTGATGGTTTCACCACCATCA CAACCCCCTGAAGCGCAATT
Product: putative PTS system N-acetylglucosamine and glucose permease
Products: NA
Alternate protein names: EIICBA-Nag; EII-Nag; N-acetylglucosamine permease IIC component; PTS system N-acetylglucosamine-specific EIIC component; N-acetylglucosamine-specific phosphotransferase enzyme IIB component; PTS system N-acetylglucosamine-specific EIIB component; N-acetylglucosamine-specific phosphotransferase enzyme IIA component; PTS system N-acetylglucosamine-specific EIIA component [H]
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MNILGYMQKVGKALMVPVATLPAAAILMGIGYWLDPVGWGSESILAAFLIKSGGAIIDNMAVLFAVGVAFGLSRDKNGSA ALSGFVMFLVVTTLLAPGSVAQLMDVELSEVPAAFGKISNQFVGIIVGIISAEIYNRYSTVELPQALAFFSGKRLVPILT SIAGMALSFALLYIWPAVYDALIVLGIKLESMGAVGAGLFGFFNRLFLSVGMHHALYPVFWFDVVGINDIPNFLGGAQSI ANGTGIPGKTGMYQAGFFPIMMFGLPAAALAMYHCSDAKNKNQVFAIMLAAAMASFFTGITEPLEFSFMFLAPVLFLLHA VLTGLSLYIAASMEWMAGFGFSAGFVDLVLSSQNPLATNWYMLLVQGVVFFALYYGIFRFAIIKFNLRTPGRGEEMEAEG EAESPEALISLTNNYIEAIGGAGNILEVDNCITRLRLTVKDSSAADSDKLKKLGAAGVVPIGKGGLQVIIGLGKVDRVAE QMKKALA
Sequences:
>Translated_487_residues MNILGYMQKVGKALMVPVATLPAAAILMGIGYWLDPVGWGSESILAAFLIKSGGAIIDNMAVLFAVGVAFGLSRDKNGSA ALSGFVMFLVVTTLLAPGSVAQLMDVELSEVPAAFGKISNQFVGIIVGIISAEIYNRYSTVELPQALAFFSGKRLVPILT SIAGMALSFALLYIWPAVYDALIVLGIKLESMGAVGAGLFGFFNRLFLSVGMHHALYPVFWFDVVGINDIPNFLGGAQSI ANGTGIPGKTGMYQAGFFPIMMFGLPAAALAMYHCSDAKNKNQVFAIMLAAAMASFFTGITEPLEFSFMFLAPVLFLLHA VLTGLSLYIAASMEWMAGFGFSAGFVDLVLSSQNPLATNWYMLLVQGVVFFALYYGIFRFAIIKFNLRTPGRGEEMEAEG EAESPEALISLTNNYIEAIGGAGNILEVDNCITRLRLTVKDSSAADSDKLKKLGAAGVVPIGKGGLQVIIGLGKVDRVAE QMKKALA >Mature_487_residues MNILGYMQKVGKALMVPVATLPAAAILMGIGYWLDPVGWGSESILAAFLIKSGGAIIDNMAVLFAVGVAFGLSRDKNGSA ALSGFVMFLVVTTLLAPGSVAQLMDVELSEVPAAFGKISNQFVGIIVGIISAEIYNRYSTVELPQALAFFSGKRLVPILT SIAGMALSFALLYIWPAVYDALIVLGIKLESMGAVGAGLFGFFNRLFLSVGMHHALYPVFWFDVVGINDIPNFLGGAQSI ANGTGIPGKTGMYQAGFFPIMMFGLPAAALAMYHCSDAKNKNQVFAIMLAAAMASFFTGITEPLEFSFMFLAPVLFLLHA VLTGLSLYIAASMEWMAGFGFSAGFVDLVLSSQNPLATNWYMLLVQGVVFFALYYGIFRFAIIKFNLRTPGRGEEMEAEG EAESPEALISLTNNYIEAIGGAGNILEVDNCITRLRLTVKDSSAADSDKLKKLGAAGVVPIGKGGLQVIIGLGKVDRVAE QMKKALA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786894, Length=501, Percent_Identity=42.1157684630739, Blast_Score=332, Evalue=3e-92, Organism=Escherichia coli, GI1787343, Length=501, Percent_Identity=35.5289421157685, Blast_Score=272, Evalue=4e-74, Organism=Escherichia coli, GI1787908, Length=516, Percent_Identity=35.077519379845, Blast_Score=254, Evalue=1e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR010974 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 51759; Mature: 51759
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILGYMQKVGKALMVPVATLPAAAILMGIGYWLDPVGWGSESILAAFLIKSGGAIIDNM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHH AVLFAVGVAFGLSRDKNGSAALSGFVMFLVVTTLLAPGSVAQLMDVELSEVPAAFGKISN HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHH QFVGIIVGIISAEIYNRYSTVELPQALAFFSGKRLVPILTSIAGMALSFALLYIWPAVYD HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALIVLGIKLESMGAVGAGLFGFFNRLFLSVGMHHALYPVFWFDVVGINDIPNFLGGAQSI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHH ANGTGIPGKTGMYQAGFFPIMMFGLPAAALAMYHCSDAKNKNQVFAIMLAAAMASFFTGI CCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC TEPLEFSFMFLAPVLFLLHAVLTGLSLYIAASMEWMAGFGFSAGFVDLVLSSQNPLATNW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHH YMLLVQGVVFFALYYGIFRFAIIKFNLRTPGRGEEMEAEGEAESPEALISLTNNYIEAIG HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC GAGNILEVDNCITRLRLTVKDSSAADSDKLKKLGAAGVVPIGKGGLQVIIGLGKVDRVAE CCCCEEEHHHHHHHHEEEECCCCCCCHHHHHHHCCCCCCEECCCCEEEEEECCHHHHHHH QMKKALA HHHHHCC >Mature Secondary Structure MNILGYMQKVGKALMVPVATLPAAAILMGIGYWLDPVGWGSESILAAFLIKSGGAIIDNM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHH AVLFAVGVAFGLSRDKNGSAALSGFVMFLVVTTLLAPGSVAQLMDVELSEVPAAFGKISN HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHH QFVGIIVGIISAEIYNRYSTVELPQALAFFSGKRLVPILTSIAGMALSFALLYIWPAVYD HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALIVLGIKLESMGAVGAGLFGFFNRLFLSVGMHHALYPVFWFDVVGINDIPNFLGGAQSI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHH ANGTGIPGKTGMYQAGFFPIMMFGLPAAALAMYHCSDAKNKNQVFAIMLAAAMASFFTGI CCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC TEPLEFSFMFLAPVLFLLHAVLTGLSLYIAASMEWMAGFGFSAGFVDLVLSSQNPLATNW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHH YMLLVQGVVFFALYYGIFRFAIIKFNLRTPGRGEEMEAEGEAESPEALISLTNNYIEAIG HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC GAGNILEVDNCITRLRLTVKDSSAADSDKLKKLGAAGVVPIGKGGLQVIIGLGKVDRVAE CCCCEEEHHHHHHHHEEEECCCCCCCHHHHHHHCCCCCCEECCCCEEEEEECCHHHHHHH QMKKALA HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3284790; 3056518; 8905232; 9278503 [H]