| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is yeiH [C]
Identifier: 218710153
GI number: 218710153
Start: 2331597
End: 2332607
Strand: Direct
Name: yeiH [C]
Synonym: VS_2183
Alternate gene names: 218710153
Gene position: 2331597-2332607 (Clockwise)
Preceding gene: 218710152
Following gene: 218710156
Centisome position: 70.67
GC content: 45.2
Gene sequence:
>1011_bases TTGTTCAATTCATTTAGACTTACTTACCATTGCGTTAAGCGTATAGTCTTCCACTACGCTGCCAATACTAGACGCGACGA ATTAAATATAATGAATCTAAAAAAGTCTGTTCCATTTTATCTTGCTGCTCTGTTTTGCTTAACCCCATGGGTGAGTTCAC CGACGGCACTCGTGATCGGCTTCCTTCTTGCGAGCTTAGGTTTAGTCCCTGAGCATCTAGAAGTGGGCAAACTCACCAAA AAGCTACTGGCCTACTCGATTGTCGGCTTAGGTTTTGGCATTCAGTTTGAGAAAGCATTAGCGGTAACAGGCGATGGTAT TGGCCTCATTGTAACGACGATTATTGGTACCTTGGTCATTGGTTGGTTCTTGGCAAAACGCATGGGATTAGATCGCACCA CGGGTTACCTTATCTCTTCTGGTACCGCAATTTGTGGTGGTAGCGCCATTGCCGCCGTAGCACCGGCCATCAAAGCCGAT GATGAACAGATTGGCTTAGCGTTAGCCACTGTATTTGTGTTGAACTCAATCGCCCTTTTCTTGTTCCCAATGATTGGCCA TGCACTAGAGTTAAGCCAACAAACTTTCGGAACATGGGCTGCCATCGCGATTCACGATACATCTTCTGTAGTAGGCGCAG CATCAGCATATGGCGAAGAAGCACTGACCACAGCAACCACATTGAAGCTCGCTCGCGCACTTTGGATTATCCCAATCGCG TTAGTCAGCGCAATGATCTTCAAGAACGATCAAAAGAAGATTACGATTCCTTACTTCATTTTCTTCTATTGCGCTGCTAT TGCTGTTAGTGACTTATTGCCACAATTTGAGATGGTCTATCAAGGTATCTTTGATGTGTCTAAGCGTGCATTGGTGGTGT GTCTATTCTTGATTGGTTGCGGTATTTCAGTTGAGAAGCTTAAAGCTGCTGGGCCGAAGCCATTGATGTTTGGTATTACA ATGTGGACGATGATTTCGACAGGCTCATTAGCGTGGTTAACGCTTACCTGA
Upstream 100 bases:
>100_bases CACTCTTCGACAGTCAGTCTCTGATCTTCGCGGCTCACTACGCTAAATAACCAAGCCTTTATTCATATCAGCGGAACAAA CGTTTAGTTTTACTTAACGT
Downstream 100 bases:
>100_bases TGCATCTAATACGTAAAGAAGCGCTGTAGATTGGTTAACTTGTTAAGCAGACAAACAGATTAGCGAATGACAAAACAAAA AGGCAAAGCTCTAATGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MFNSFRLTYHCVKRIVFHYAANTRRDELNIMNLKKSVPFYLAALFCLTPWVSSPTALVIGFLLASLGLVPEHLEVGKLTK KLLAYSIVGLGFGIQFEKALAVTGDGIGLIVTTIIGTLVIGWFLAKRMGLDRTTGYLISSGTAICGGSAIAAVAPAIKAD DEQIGLALATVFVLNSIALFLFPMIGHALELSQQTFGTWAAIAIHDTSSVVGAASAYGEEALTTATTLKLARALWIIPIA LVSAMIFKNDQKKITIPYFIFFYCAAIAVSDLLPQFEMVYQGIFDVSKRALVVCLFLIGCGISVEKLKAAGPKPLMFGIT MWTMISTGSLAWLTLT
Sequences:
>Translated_336_residues MFNSFRLTYHCVKRIVFHYAANTRRDELNIMNLKKSVPFYLAALFCLTPWVSSPTALVIGFLLASLGLVPEHLEVGKLTK KLLAYSIVGLGFGIQFEKALAVTGDGIGLIVTTIIGTLVIGWFLAKRMGLDRTTGYLISSGTAICGGSAIAAVAPAIKAD DEQIGLALATVFVLNSIALFLFPMIGHALELSQQTFGTWAAIAIHDTSSVVGAASAYGEEALTTATTLKLARALWIIPIA LVSAMIFKNDQKKITIPYFIFFYCAAIAVSDLLPQFEMVYQGIFDVSKRALVVCLFLIGCGISVEKLKAAGPKPLMFGIT MWTMISTGSLAWLTLT >Mature_336_residues MFNSFRLTYHCVKRIVFHYAANTRRDELNIMNLKKSVPFYLAALFCLTPWVSSPTALVIGFLLASLGLVPEHLEVGKLTK KLLAYSIVGLGFGIQFEKALAVTGDGIGLIVTTIIGTLVIGWFLAKRMGLDRTTGYLISSGTAICGGSAIAAVAPAIKAD DEQIGLALATVFVLNSIALFLFPMIGHALELSQQTFGTWAAIAIHDTSSVVGAASAYGEEALTTATTLKLARALWIIPIA LVSAMIFKNDQKKITIPYFIFFYCAAIAVSDLLPQFEMVYQGIFDVSKRALVVCLFLIGCGISVEKLKAAGPKPLMFGIT MWTMISTGSLAWLTLT
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=268, Percent_Identity=30.5970149253731, Blast_Score=101, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 36220; Mature: 36220
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNSFRLTYHCVKRIVFHYAANTRRDELNIMNLKKSVPFYLAALFCLTPWVSSPTALVIG CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHH FLLASLGLVPEHLEVGKLTKKLLAYSIVGLGFGIQFEKALAVTGDGIGLIVTTIIGTLVI HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHH GWFLAKRMGLDRTTGYLISSGTAICGGSAIAAVAPAIKADDEQIGLALATVFVLNSIALF HHHHHHHHCCCCCCCEEEECCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LFPMIGHALELSQQTFGTWAAIAIHDTSSVVGAASAYGEEALTTATTLKLARALWIIPIA HHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH LVSAMIFKNDQKKITIPYFIFFYCAAIAVSDLLPQFEMVYQGIFDVSKRALVVCLFLIGC HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GISVEKLKAAGPKPLMFGITMWTMISTGSLAWLTLT CCCHHHHHCCCCCCEEHHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure MFNSFRLTYHCVKRIVFHYAANTRRDELNIMNLKKSVPFYLAALFCLTPWVSSPTALVIG CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHH FLLASLGLVPEHLEVGKLTKKLLAYSIVGLGFGIQFEKALAVTGDGIGLIVTTIIGTLVI HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHH GWFLAKRMGLDRTTGYLISSGTAICGGSAIAAVAPAIKADDEQIGLALATVFVLNSIALF HHHHHHHHCCCCCCCEEEECCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LFPMIGHALELSQQTFGTWAAIAIHDTSSVVGAASAYGEEALTTATTLKLARALWIIPIA HHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH LVSAMIFKNDQKKITIPYFIFFYCAAIAVSDLLPQFEMVYQGIFDVSKRALVVCLFLIGC HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GISVEKLKAAGPKPLMFGITMWTMISTGSLAWLTLT CCCHHHHHCCCCCCEEHHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA