| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710151
Identifier: 218710151
GI number: 218710151
Start: 2329060
End: 2329650
Strand: Direct
Name: 218710151
Synonym: VS_2181
Alternate gene names: NA
Gene position: 2329060-2329650 (Clockwise)
Preceding gene: 218710146
Following gene: 218710152
Centisome position: 70.59
GC content: 41.12
Gene sequence:
>591_bases ATGGCACGACGAAACGATCATACTCGCGAACAATTAGTGCAATTAACCTTAAAGACGGTAACCGACTTCTTAGAAGAGCA CTCTTATCACGAGCTAAGTCTACGTAAAATTGCCAATATGATTGGTTATGTCCCTAGCACCTTGGTGAATGTATTTGGTA ACTACAACCTACTCCTTTTACACGTTGTTGCTCAAACATTAGATGAACTGTCGTCCCAATCTGCTTCTGCGGTTGAACAA TCGAGCAACCCTCAACAGGCTCTTTTCAATCTTGCATACTGCTATCACGATTTTGCACAAAAACACCCTCACCGTTGGCA GCTTATCTTTGAGCACAACATGAATGGTGAAAACCTTCCTGAATGGCAATCGAACCGTATTGATAGAATGACAGGTATGT TAGAGCAATTGCTGGTAGCTATTGCGCCTGAACACACAGAAAGCGAAGTCATTAAAGCCAGCCGTGTATTATGGTCTGGA GTACATGGAATTACTCTACTTAGCGTTGATGATAAATTTTTTGCCTCTGAACCTATCGATGGTAAAGAGTTGATCAATAA CCTAATCTCAAACTACTTAACCAACTGGTAA
Upstream 100 bases:
>100_bases TATTGCGGCTATTAATTGATTACTAAACTAGCGAAGGGATTGACGGCACTCTGGGGCAGCATTAAAATATTGAACGATGT TCATTTAATAGAAAGTACTC
Downstream 100 bases:
>100_bases TCATCCAAGGAAAGACAATGAACAACAGCAGCCAATCTTCGCTGTTAACGCAAAAAAGGTTCCTACCCTACTTTATTACT CAATTTCTAGGCGCCTTTAA
Product: AcrR, transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; AcrR Transcriptional Regulator; HTH-Type Transcriptional Regulator; TetR-Family Transcriptional Regulator
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MARRNDHTREQLVQLTLKTVTDFLEEHSYHELSLRKIANMIGYVPSTLVNVFGNYNLLLLHVVAQTLDELSSQSASAVEQ SSNPQQALFNLAYCYHDFAQKHPHRWQLIFEHNMNGENLPEWQSNRIDRMTGMLEQLLVAIAPEHTESEVIKASRVLWSG VHGITLLSVDDKFFASEPIDGKELINNLISNYLTNW
Sequences:
>Translated_196_residues MARRNDHTREQLVQLTLKTVTDFLEEHSYHELSLRKIANMIGYVPSTLVNVFGNYNLLLLHVVAQTLDELSSQSASAVEQ SSNPQQALFNLAYCYHDFAQKHPHRWQLIFEHNMNGENLPEWQSNRIDRMTGMLEQLLVAIAPEHTESEVIKASRVLWSG VHGITLLSVDDKFFASEPIDGKELINNLISNYLTNW >Mature_195_residues ARRNDHTREQLVQLTLKTVTDFLEEHSYHELSLRKIANMIGYVPSTLVNVFGNYNLLLLHVVAQTLDELSSQSASAVEQS SNPQQALFNLAYCYHDFAQKHPHRWQLIFEHNMNGENLPEWQSNRIDRMTGMLEQLLVAIAPEHTESEVIKASRVLWSGV HGITLLSVDDKFFASEPIDGKELINNLISNYLTNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22502; Mature: 22371
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRNDHTREQLVQLTLKTVTDFLEEHSYHELSLRKIANMIGYVPSTLVNVFGNYNLLLL CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH HVVAQTLDELSSQSASAVEQSSNPQQALFNLAYCYHDFAQKHPHRWQLIFEHNMNGENLP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC EWQSNRIDRMTGMLEQLLVAIAPEHTESEVIKASRVLWSGVHGITLLSVDDKFFASEPID CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCC GKELINNLISNYLTNW HHHHHHHHHHHHHCCC >Mature Secondary Structure ARRNDHTREQLVQLTLKTVTDFLEEHSYHELSLRKIANMIGYVPSTLVNVFGNYNLLLL CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH HVVAQTLDELSSQSASAVEQSSNPQQALFNLAYCYHDFAQKHPHRWQLIFEHNMNGENLP HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC EWQSNRIDRMTGMLEQLLVAIAPEHTESEVIKASRVLWSGVHGITLLSVDDKFFASEPID CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCC GKELINNLISNYLTNW HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA