| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is tesB [H]
Identifier: 218710143
GI number: 218710143
Start: 2317314
End: 2318174
Strand: Direct
Name: tesB [H]
Synonym: VS_2166
Alternate gene names: 218710143
Gene position: 2317314-2318174 (Clockwise)
Preceding gene: 218710141
Following gene: 218710146
Centisome position: 70.24
GC content: 48.2
Gene sequence:
>861_bases ATGAGTCAACCTTTAAATGAATTACTCAATTTACTTCAGCTAGAGAAACTAGAGGAAGGCCTGTTCCGCGGGCAAAGTGA GAACCTAGGTCTGCCACAGGTATACGGCGGTCAAGTATTAGGGCAAGCGCTTTCTGCTGCTCGTTATACGGTTCAAGACG ACCGCAGTGTTCACTCGTTCCACAGTTACTTTCTATTTCCCGGCGACCCTGAAAAACCCATTATTTACGATGTTGAGAAC CTAAGAGATGGACGCAGCTTTAGTACACGCCGCGTGAAAGCGATTCAAAATGGCCGCCCTATTTTCTATCTTACGGCTTC TTATCATGGTGACGCACCCGGCTTTGAACACCAGAATGAAATGCCAAACATCCCAGGGCCAGAGAACTTTGCATCAGAAA CTGAGTTAGCAAGCCACATTGCTGAATTTTTGCCTGAGAAACTGCGTAAGACTTTCTGTGGCGAAAAGCCAATTGAGATG CGCCCGGTAACAATAGTGAACCCGCTTAACCCTAAGAAAGCCGACCCAAAACAATACCTTTGGGTGAGAGCAAATGGCGC GATGCCAGACAACCAATTGATTCACCAATACCTGCTTGCTTACGCATCGGATTGGGGGTTCTTGGTGACGGCGCTTCACC CTCACGAAGTTTCTATCATGACGCCGAACTTCCAAGTAGCGACGATTGACCACTCTATCTGGTTCCACCGCCCATTCAAG ATGGATGAGTGGTTGCTTTATGCGATTGAAAGCCCAACGGCAGCGAACACTCGTGGCCTAGTGCGCGGCGAGATCTTTAA TCAGAAAGGTGAGCTAGTAGCGACTGCCGTTCAAGAAGGTGTGATGCGTTTTACTAAATAG
Upstream 100 bases:
>100_bases ATTCTGTCTCGAAACCCTATGATTTATTGACAGATATCTGACTAAGCTGAATGATTAACACCATAATCTGACACCTATTT TACCAAGAGGCATGCTGGCG
Downstream 100 bases:
>100_bases CGATCAAGTAATACCAATCGTAGTAAATAACTGGTCATCCTAGCTTGTTAAAAACCTCGATAACTTCGTTAGAATTTTTG ATTGTAGAATAACTACTTAT
Product: acyl-Coa thioesterase II
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSQPLNELLNLLQLEKLEEGLFRGQSENLGLPQVYGGQVLGQALSAARYTVQDDRSVHSFHSYFLFPGDPEKPIIYDVEN LRDGRSFSTRRVKAIQNGRPIFYLTASYHGDAPGFEHQNEMPNIPGPENFASETELASHIAEFLPEKLRKTFCGEKPIEM RPVTIVNPLNPKKADPKQYLWVRANGAMPDNQLIHQYLLAYASDWGFLVTALHPHEVSIMTPNFQVATIDHSIWFHRPFK MDEWLLYAIESPTAANTRGLVRGEIFNQKGELVATAVQEGVMRFTK
Sequences:
>Translated_286_residues MSQPLNELLNLLQLEKLEEGLFRGQSENLGLPQVYGGQVLGQALSAARYTVQDDRSVHSFHSYFLFPGDPEKPIIYDVEN LRDGRSFSTRRVKAIQNGRPIFYLTASYHGDAPGFEHQNEMPNIPGPENFASETELASHIAEFLPEKLRKTFCGEKPIEM RPVTIVNPLNPKKADPKQYLWVRANGAMPDNQLIHQYLLAYASDWGFLVTALHPHEVSIMTPNFQVATIDHSIWFHRPFK MDEWLLYAIESPTAANTRGLVRGEIFNQKGELVATAVQEGVMRFTK >Mature_285_residues SQPLNELLNLLQLEKLEEGLFRGQSENLGLPQVYGGQVLGQALSAARYTVQDDRSVHSFHSYFLFPGDPEKPIIYDVENL RDGRSFSTRRVKAIQNGRPIFYLTASYHGDAPGFEHQNEMPNIPGPENFASETELASHIAEFLPEKLRKTFCGEKPIEMR PVTIVNPLNPKKADPKQYLWVRANGAMPDNQLIHQYLLAYASDWGFLVTALHPHEVSIMTPNFQVATIDHSIWFHRPFKM DEWLLYAIESPTAANTRGLVRGEIFNQKGELVATAVQEGVMRFTK
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=284, Percent_Identity=41.5492957746479, Blast_Score=219, Evalue=3e-57, Organism=Escherichia coli, GI1786657, Length=283, Percent_Identity=60.4240282685512, Blast_Score=353, Evalue=9e-99, Organism=Caenorhabditis elegans, GI17558508, Length=309, Percent_Identity=36.2459546925566, Blast_Score=178, Evalue=4e-45, Organism=Caenorhabditis elegans, GI71988741, Length=298, Percent_Identity=33.5570469798658, Blast_Score=177, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17531889, Length=268, Percent_Identity=34.3283582089552, Blast_Score=165, Evalue=2e-41, Organism=Caenorhabditis elegans, GI115532456, Length=268, Percent_Identity=34.3283582089552, Blast_Score=165, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17531885, Length=268, Percent_Identity=34.3283582089552, Blast_Score=164, Evalue=4e-41, Organism=Caenorhabditis elegans, GI212645202, Length=283, Percent_Identity=29.3286219081272, Blast_Score=120, Evalue=8e-28, Organism=Caenorhabditis elegans, GI71982224, Length=300, Percent_Identity=27.3333333333333, Blast_Score=116, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 32452; Mature: 32321
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPLNELLNLLQLEKLEEGLFRGQSENLGLPQVYGGQVLGQALSAARYTVQDDRSVHSF CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCEECCCCHHHHH HSYFLFPGDPEKPIIYDVENLRDGRSFSTRRVKAIQNGRPIFYLTASYHGDAPGFEHQNE HEEEEECCCCCCCEEEEHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC MPNIPGPENFASETELASHIAEFLPEKLRKTFCGEKPIEMRPVTIVNPLNPKKADPKQYL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEE WVRANGAMPDNQLIHQYLLAYASDWGFLVTALHPHEVSIMTPNFQVATIDHSIWFHRPFK EEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCEEEEEEECCEEEECCCC MDEWLLYAIESPTAANTRGLVRGEIFNQKGELVATAVQEGVMRFTK CCCEEEEEECCCCCCCCCCEEEHHHCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SQPLNELLNLLQLEKLEEGLFRGQSENLGLPQVYGGQVLGQALSAARYTVQDDRSVHSF CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCEECCCCHHHHH HSYFLFPGDPEKPIIYDVENLRDGRSFSTRRVKAIQNGRPIFYLTASYHGDAPGFEHQNE HEEEEECCCCCCCEEEEHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC MPNIPGPENFASETELASHIAEFLPEKLRKTFCGEKPIEMRPVTIVNPLNPKKADPKQYL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEE WVRANGAMPDNQLIHQYLLAYASDWGFLVTALHPHEVSIMTPNFQVATIDHSIWFHRPFK EEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCEEEEEEECCEEEECCCC MDEWLLYAIESPTAANTRGLVRGEIFNQKGELVATAVQEGVMRFTK CCCEEEEEECCCCCCCCCCEEEHHHCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]