| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710126
Identifier: 218710126
GI number: 218710126
Start: 2303708
End: 2304175
Strand: Direct
Name: 218710126
Synonym: VS_2147
Alternate gene names: NA
Gene position: 2303708-2304175 (Clockwise)
Preceding gene: 218710125
Following gene: 218710131
Centisome position: 69.82
GC content: 48.08
Gene sequence:
>468_bases ATGAGGTCGGGTTACATGGAGACAACTCAAACACGCAACACCATGGCCAAGCTCGGTTATATGGGTTTAATCCCCTTTTT ATTCGGTCTACTATTATCACTCACCGACAGCCAAGTCTTTAGCTTGAGCGGAGAAACACTCTTCATCACCTACAGCGTGG TTATCTTGAGCTTTTTGTCGGGCATCTTGTGGGGCAATGGGATAGAGAACTTCGAAAGCCAATCCAGCAACAAGGCTCTG ATTCTTAGCAATGTTATTGTGTTGGCAGCGTGGCTAGCGGTGCTACTCGGTGAGCAGCAAGAGTTCCTCACCACTCTGAT TCTGATCTTAGGCTACATTGCGGTTTGGCGAGCGGAAAGGTCAATGAGAGAAGAGAATCAAAGTGAAGGCCCCGACGGCT ACTTTGACATGAGAACTCGCCTCACCTCTAGTGTCGTATTAATGCACGGTATCGTGATGTTGACCTAG
Upstream 100 bases:
>100_bases ACAAGTTCTTGGTCAGCAAAGAAGGCAAAGTGATAGCAACCTTCCCGAGTTCTACATCGCCAACCAGTAGTACCCTCAAA AATGCTATTGAGCAACAGTT
Downstream 100 bases:
>100_bases GCGTGCGTACGCCCATATTTAAACCGGCATCAAGATGCGGGCTCTAGATAGGCACTCTCTTCTTTAATGGCACCAAAACC ATCGACAAATACAACTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MRSGYMETTQTRNTMAKLGYMGLIPFLFGLLLSLTDSQVFSLSGETLFITYSVVILSFLSGILWGNGIENFESQSSNKAL ILSNVIVLAAWLAVLLGEQQEFLTTLILILGYIAVWRAERSMREENQSEGPDGYFDMRTRLTSSVVLMHGIVMLT
Sequences:
>Translated_155_residues MRSGYMETTQTRNTMAKLGYMGLIPFLFGLLLSLTDSQVFSLSGETLFITYSVVILSFLSGILWGNGIENFESQSSNKAL ILSNVIVLAAWLAVLLGEQQEFLTTLILILGYIAVWRAERSMREENQSEGPDGYFDMRTRLTSSVVLMHGIVMLT >Mature_155_residues MRSGYMETTQTRNTMAKLGYMGLIPFLFGLLLSLTDSQVFSLSGETLFITYSVVILSFLSGILWGNGIENFESQSSNKAL ILSNVIVLAAWLAVLLGEQQEFLTTLILILGYIAVWRAERSMREENQSEGPDGYFDMRTRLTSSVVLMHGIVMLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17301; Mature: 17301
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGYMETTQTRNTMAKLGYMGLIPFLFGLLLSLTDSQVFSLSGETLFITYSVVILSFLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHHH GILWGNGIENFESQSSNKALILSNVIVLAAWLAVLLGEQQEFLTTLILILGYIAVWRAER HHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SMREENQSEGPDGYFDMRTRLTSSVVLMHGIVMLT HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRSGYMETTQTRNTMAKLGYMGLIPFLFGLLLSLTDSQVFSLSGETLFITYSVVILSFLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHHH GILWGNGIENFESQSSNKALILSNVIVLAAWLAVLLGEQQEFLTTLILILGYIAVWRAER HHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SMREENQSEGPDGYFDMRTRLTSSVVLMHGIVMLT HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA