| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yceB [C]
Identifier: 218710118
GI number: 218710118
Start: 2296503
End: 2297123
Strand: Reverse
Name: yceB [C]
Synonym: VS_2139
Alternate gene names: 218710118
Gene position: 2297123-2296503 (Counterclockwise)
Preceding gene: 218710119
Following gene: 218710117
Centisome position: 69.62
GC content: 42.19
Gene sequence:
>621_bases TTGTTTATTGATGACCACACAGTAAACTCCGCGCTAATCACTAACGATAAAGAGCTGATACTGATGATAATTAACGTAGC AAAAAAGTTCATTTTAGCGGCTTCTGCACTGATATTAGGTGGTTGTGTTAGCTACAGCGTTACTGAACAAGAAATGACGA ACTACCTGCAAGATTCGGTGATGTTAGAACAAGAAGTCGGTGTGCAAAACGTTATGTATGCGCAAGTGGCGGTTGATGAC TTAGCGGTACAAATTGGTCGAGCTGATGCCGAGCGAGTGTCTGTTCTGGCGAATACCAATGCAAAGGTTCAAGTGTTTAA CATGCCAAACATGGGGCTAGATCTGGATATCGAATTCAGCGCGATTCCCGAATACGATAAAGAGAGTGGTGAGGTCTACT TAAAATCTCTGCGTCTTGAGCGCTTTGAGGAGAAGGGAAAGCAGCTTTCTCCTGAAATAGAGAAGTTACTAAAGCCTGCC GTTTCTATGATTGGCTTTGCTTTGTCCCAGTCACCGGTTTACAAATTGGATAGCAATAAAGTGCAAGAGTCGTTGATTAA ATCATCGGAACCCAATCTAGTGATTAAAGACAATAAGCTGGTCATCGAGTTATTCGATTAA
Upstream 100 bases:
>100_bases AGTGTCATTATCTCAAGCGGGAAAGCTAATCTGGTGCTTTACTTACTGATATTTATGCTTATTAATTAAAGGTATTCACG AATATCGTGTCTTTACTGTT
Downstream 100 bases:
>100_bases CCTTTCACGTTTAGCTTAGACCCATATTTAAAACACAATGGCTGCCGATTAGGTGGCCATTTTTGTTTGTGTTGATTCGG TTCACTAATCTTATCAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MFIDDHTVNSALITNDKELILMIINVAKKFILAASALILGGCVSYSVTEQEMTNYLQDSVMLEQEVGVQNVMYAQVAVDD LAVQIGRADAERVSVLANTNAKVQVFNMPNMGLDLDIEFSAIPEYDKESGEVYLKSLRLERFEEKGKQLSPEIEKLLKPA VSMIGFALSQSPVYKLDSNKVQESLIKSSEPNLVIKDNKLVIELFD
Sequences:
>Translated_206_residues MFIDDHTVNSALITNDKELILMIINVAKKFILAASALILGGCVSYSVTEQEMTNYLQDSVMLEQEVGVQNVMYAQVAVDD LAVQIGRADAERVSVLANTNAKVQVFNMPNMGLDLDIEFSAIPEYDKESGEVYLKSLRLERFEEKGKQLSPEIEKLLKPA VSMIGFALSQSPVYKLDSNKVQESLIKSSEPNLVIKDNKLVIELFD >Mature_206_residues MFIDDHTVNSALITNDKELILMIINVAKKFILAASALILGGCVSYSVTEQEMTNYLQDSVMLEQEVGVQNVMYAQVAVDD LAVQIGRADAERVSVLANTNAKVQVFNMPNMGLDLDIEFSAIPEYDKESGEVYLKSLRLERFEEKGKQLSPEIEKLLKPA VSMIGFALSQSPVYKLDSNKVQESLIKSSEPNLVIKDNKLVIELFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787302, Length=185, Percent_Identity=23.7837837837838, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22922; Mature: 22922
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIDDHTVNSALITNDKELILMIINVAKKFILAASALILGGCVSYSVTEQEMTNYLQDSV CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHH MLEQEVGVQNVMYAQVAVDDLAVQIGRADAERVSVLANTNAKVQVFNMPNMGLDLDIEFS HHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCEEEEEECCCCCEEEEEEEC AIPEYDKESGEVYLKSLRLERFEEKGKQLSPEIEKLLKPAVSMIGFALSQSPVYKLDSNK CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCHH VQESLIKSSEPNLVIKDNKLVIELFD HHHHHHHCCCCCEEEECCEEEEEEEC >Mature Secondary Structure MFIDDHTVNSALITNDKELILMIINVAKKFILAASALILGGCVSYSVTEQEMTNYLQDSV CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHH MLEQEVGVQNVMYAQVAVDDLAVQIGRADAERVSVLANTNAKVQVFNMPNMGLDLDIEFS HHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCEEEEEECCCCCEEEEEEEC AIPEYDKESGEVYLKSLRLERFEEKGKQLSPEIEKLLKPAVSMIGFALSQSPVYKLDSNK CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCHH VQESLIKSSEPNLVIKDNKLVIELFD HHHHHHHCCCCCEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA