Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is yceB [C]

Identifier: 218710118

GI number: 218710118

Start: 2296503

End: 2297123

Strand: Reverse

Name: yceB [C]

Synonym: VS_2139

Alternate gene names: 218710118

Gene position: 2297123-2296503 (Counterclockwise)

Preceding gene: 218710119

Following gene: 218710117

Centisome position: 69.62

GC content: 42.19

Gene sequence:

>621_bases
TTGTTTATTGATGACCACACAGTAAACTCCGCGCTAATCACTAACGATAAAGAGCTGATACTGATGATAATTAACGTAGC
AAAAAAGTTCATTTTAGCGGCTTCTGCACTGATATTAGGTGGTTGTGTTAGCTACAGCGTTACTGAACAAGAAATGACGA
ACTACCTGCAAGATTCGGTGATGTTAGAACAAGAAGTCGGTGTGCAAAACGTTATGTATGCGCAAGTGGCGGTTGATGAC
TTAGCGGTACAAATTGGTCGAGCTGATGCCGAGCGAGTGTCTGTTCTGGCGAATACCAATGCAAAGGTTCAAGTGTTTAA
CATGCCAAACATGGGGCTAGATCTGGATATCGAATTCAGCGCGATTCCCGAATACGATAAAGAGAGTGGTGAGGTCTACT
TAAAATCTCTGCGTCTTGAGCGCTTTGAGGAGAAGGGAAAGCAGCTTTCTCCTGAAATAGAGAAGTTACTAAAGCCTGCC
GTTTCTATGATTGGCTTTGCTTTGTCCCAGTCACCGGTTTACAAATTGGATAGCAATAAAGTGCAAGAGTCGTTGATTAA
ATCATCGGAACCCAATCTAGTGATTAAAGACAATAAGCTGGTCATCGAGTTATTCGATTAA

Upstream 100 bases:

>100_bases
AGTGTCATTATCTCAAGCGGGAAAGCTAATCTGGTGCTTTACTTACTGATATTTATGCTTATTAATTAAAGGTATTCACG
AATATCGTGTCTTTACTGTT

Downstream 100 bases:

>100_bases
CCTTTCACGTTTAGCTTAGACCCATATTTAAAACACAATGGCTGCCGATTAGGTGGCCATTTTTGTTTGTGTTGATTCGG
TTCACTAATCTTATCAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MFIDDHTVNSALITNDKELILMIINVAKKFILAASALILGGCVSYSVTEQEMTNYLQDSVMLEQEVGVQNVMYAQVAVDD
LAVQIGRADAERVSVLANTNAKVQVFNMPNMGLDLDIEFSAIPEYDKESGEVYLKSLRLERFEEKGKQLSPEIEKLLKPA
VSMIGFALSQSPVYKLDSNKVQESLIKSSEPNLVIKDNKLVIELFD

Sequences:

>Translated_206_residues
MFIDDHTVNSALITNDKELILMIINVAKKFILAASALILGGCVSYSVTEQEMTNYLQDSVMLEQEVGVQNVMYAQVAVDD
LAVQIGRADAERVSVLANTNAKVQVFNMPNMGLDLDIEFSAIPEYDKESGEVYLKSLRLERFEEKGKQLSPEIEKLLKPA
VSMIGFALSQSPVYKLDSNKVQESLIKSSEPNLVIKDNKLVIELFD
>Mature_206_residues
MFIDDHTVNSALITNDKELILMIINVAKKFILAASALILGGCVSYSVTEQEMTNYLQDSVMLEQEVGVQNVMYAQVAVDD
LAVQIGRADAERVSVLANTNAKVQVFNMPNMGLDLDIEFSAIPEYDKESGEVYLKSLRLERFEEKGKQLSPEIEKLLKPA
VSMIGFALSQSPVYKLDSNKVQESLIKSSEPNLVIKDNKLVIELFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787302, Length=185, Percent_Identity=23.7837837837838, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22922; Mature: 22922

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIDDHTVNSALITNDKELILMIINVAKKFILAASALILGGCVSYSVTEQEMTNYLQDSV
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHH
MLEQEVGVQNVMYAQVAVDDLAVQIGRADAERVSVLANTNAKVQVFNMPNMGLDLDIEFS
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCEEEEEECCCCCEEEEEEEC
AIPEYDKESGEVYLKSLRLERFEEKGKQLSPEIEKLLKPAVSMIGFALSQSPVYKLDSNK
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCHH
VQESLIKSSEPNLVIKDNKLVIELFD
HHHHHHHCCCCCEEEECCEEEEEEEC
>Mature Secondary Structure
MFIDDHTVNSALITNDKELILMIINVAKKFILAASALILGGCVSYSVTEQEMTNYLQDSV
CCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHH
MLEQEVGVQNVMYAQVAVDDLAVQIGRADAERVSVLANTNAKVQVFNMPNMGLDLDIEFS
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCEEEEEECCCCCEEEEEEEC
AIPEYDKESGEVYLKSLRLERFEEKGKQLSPEIEKLLKPAVSMIGFALSQSPVYKLDSNK
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCHH
VQESLIKSSEPNLVIKDNKLVIELFD
HHHHHHHCCCCCEEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA