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The map label for this gene is putR [H]

Identifier: 218710108

GI number: 218710108

Start: 2289099

End: 2289584

Strand: Direct

Name: putR [H]

Synonym: VS_2129

Alternate gene names: 218710108

Gene position: 2289099-2289584 (Clockwise)

Preceding gene: 218710106

Following gene: 218710110

Centisome position: 69.38

GC content: 45.27

Gene sequence:

>486_bases
ATGAAACAGAAAGAATCCACCAAAGAAGTGTTAGATGACACAGATATCGCCATCTTAGAACATATCCAACAAGACGGACG
CATGAGCAACAGCAAGCTCGCAGAGAAAGTGAACCTCAGCGAAACCCCATGTTGGCGCCGTTGGAAACGCATGGAAGAGA
CGGGTTATATCGATGGTTACGCCGCGAAGCTAAACCGCAAAAAGCTTGGTTTTCATGTGGCTGGTTTTACTCTTGTGACC
TTAGGTAACCATGAAGTAGAAAACACAGAACCGTTTGAAGAGTTTGTCGAAGTAACCGATTGGATTCCTATGTGTCACTG
CATTGCAGGCGGCGCCGACTATATGATTCAAGTGCTAGCGAAAGATTTGGAAGAGTACTTTGAGCGTATTAGCTCGATCA
GGCGAGTAAAAGGCGTGAGTGCGATTCAGTCCAATATCTCGGTTAAAGAGTTGAAAAACAGCTATAAGTTGCCTCTTGGG
GATTAG

Upstream 100 bases:

>100_bases
AAGTATTTATACGGAGAGAGTTTACAGATTCGACTAGGAATTAAATTGCTATATAGGCTAATATTAATGCAAATTTGAGC
AAGATTTCCCTAAAAACACC

Downstream 100 bases:

>100_bases
CTTGGGGCTTCAAACGCTACTAGTATGATATTAACACTATTGATTATCTGATAGGCGTTCGTTGGACCAAGGAGCTCAAC
AAAAATTGGACTGTTCACTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKQKESTKEVLDDTDIAILEHIQQDGRMSNSKLAEKVNLSETPCWRRWKRMEETGYIDGYAAKLNRKKLGFHVAGFTLVT
LGNHEVENTEPFEEFVEVTDWIPMCHCIAGGADYMIQVLAKDLEEYFERISSIRRVKGVSAIQSNISVKELKNSYKLPLG
D

Sequences:

>Translated_161_residues
MKQKESTKEVLDDTDIAILEHIQQDGRMSNSKLAEKVNLSETPCWRRWKRMEETGYIDGYAAKLNRKKLGFHVAGFTLVT
LGNHEVENTEPFEEFVEVTDWIPMCHCIAGGADYMIQVLAKDLEEYFERISSIRRVKGVSAIQSNISVKELKNSYKLPLG
D
>Mature_161_residues
MKQKESTKEVLDDTDIAILEHIQQDGRMSNSKLAEKVNLSETPCWRRWKRMEETGYIDGYAAKLNRKKLGFHVAGFTLVT
LGNHEVENTEPFEEFVEVTDWIPMCHCIAGGADYMIQVLAKDLEEYFERISSIRRVKGVSAIQSNISVKELKNSYKLPLG
D

Specific function: Transcriptional activator of the putA gene in response to proline [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=148, Percent_Identity=33.7837837837838, Blast_Score=94, Evalue=3e-21,
Organism=Escherichia coli, GI87081742, Length=156, Percent_Identity=32.6923076923077, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18441; Mature: 18441

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKESTKEVLDDTDIAILEHIQQDGRMSNSKLAEKVNLSETPCWRRWKRMEETGYIDGY
CCCCHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHH
AAKLNRKKLGFHVAGFTLVTLGNHEVENTEPFEEFVEVTDWIPMCHCIAGGADYMIQVLA
HHHHHHHHCCEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KDLEEYFERISSIRRVKGVSAIQSNISVKELKNSYKLPLGD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKQKESTKEVLDDTDIAILEHIQQDGRMSNSKLAEKVNLSETPCWRRWKRMEETGYIDGY
CCCCHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHH
AAKLNRKKLGFHVAGFTLVTLGNHEVENTEPFEEFVEVTDWIPMCHCIAGGADYMIQVLA
HHHHHHHHCCEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KDLEEYFERISSIRRVKGVSAIQSNISVKELKNSYKLPLGD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8606160 [H]