Click here to switch to the map view.

The map label for this gene is 218710098

Identifier: 218710098

GI number: 218710098

Start: 2277927

End: 2278454

Strand: Reverse

Name: 218710098

Synonym: VS_2119

Alternate gene names: NA

Gene position: 2278454-2277927 (Counterclockwise)

Preceding gene: 218710099

Following gene: 218710097

Centisome position: 69.06

GC content: 41.86

Gene sequence:

>528_bases
ATGATGAGAAAAAAAGCTAAGGCAAAACCTCAGTCCAAAAAGCAGAAGTTGAGATCGGCATTACTGTATACCTTGTTCGC
ATTGGTCGTGGTCTTTGGTGTTGATTATTGGCGTACAAAAGACGTTCCAATGCAGAACGTTCCGCCAATGGTTGGGATGT
CGTTATCCGGTAAACCGATAGATGTAATAGAGATGAGTAAGAAAGAGCCGGTATTAGTTTATTTTTGGACGACATGGTGC
GTCGCCTGCAAATTTGTGACGCCAGTGGTTGATTGGTTTTCATCGAGCTATCCCGTCGTTGGTGTATCACTGACTTCGGG
TAAAGATGAAAGAGTTCAACGCTATATGAATGCTAAAGGGTATAGCTACGACAACATTAATGACACTCAAGGTAAAATTG
CACGCGATTGGGGAATCTCCTTAACGCCAACACTCATTGTTATTAATGATGGAAAAGTAACAAGTGTTACTTCAGGAATT
ACTACGCCAATAGGTATCGCAGCCCGACTTTGGTTAGCTAAGTATTAA

Upstream 100 bases:

>100_bases
TGGTTTATGGCCCTAACGCTCCGGAAGGTATTGAGCTTCCTGTCATCTTAACCAGTGATGCGGTGATGGAAGCCATTGAG
AAAGCAAAAGGTGGTGACGA

Downstream 100 bases:

>100_bases
TGGGAAAAATATGAAATTCATTACAAGAAGCATCATCACACTATTGGTTACTCTGGCTTTCTCACCCGTCACTTTCGCAA
TGACAAAACAAGAAAAAATT

Product: putative thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MMRKKAKAKPQSKKQKLRSALLYTLFALVVVFGVDYWRTKDVPMQNVPPMVGMSLSGKPIDVIEMSKKEPVLVYFWTTWC
VACKFVTPVVDWFSSSYPVVGVSLTSGKDERVQRYMNAKGYSYDNINDTQGKIARDWGISLTPTLIVINDGKVTSVTSGI
TTPIGIAARLWLAKY

Sequences:

>Translated_175_residues
MMRKKAKAKPQSKKQKLRSALLYTLFALVVVFGVDYWRTKDVPMQNVPPMVGMSLSGKPIDVIEMSKKEPVLVYFWTTWC
VACKFVTPVVDWFSSSYPVVGVSLTSGKDERVQRYMNAKGYSYDNINDTQGKIARDWGISLTPTLIVINDGKVTSVTSGI
TTPIGIAARLWLAKY
>Mature_175_residues
MMRKKAKAKPQSKKQKLRSALLYTLFALVVVFGVDYWRTKDVPMQNVPPMVGMSLSGKPIDVIEMSKKEPVLVYFWTTWC
VACKFVTPVVDWFSSSYPVVGVSLTSGKDERVQRYMNAKGYSYDNINDTQGKIARDWGISLTPTLIVINDGKVTSVTSGI
TTPIGIAARLWLAKY

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 19622; Mature: 19622

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKKAKAKPQSKKQKLRSALLYTLFALVVVFGVDYWRTKDVPMQNVPPMVGMSLSGKPI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCE
DVIEMSKKEPVLVYFWTTWCVACKFVTPVVDWFSSSYPVVGVSLTSGKDERVQRYMNAKG
EEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCC
YSYDNINDTQGKIARDWGISLTPTLIVINDGKVTSVTSGITTPIGIAARLWLAKY
CCCCCCCCCCCCEECCCCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MMRKKAKAKPQSKKQKLRSALLYTLFALVVVFGVDYWRTKDVPMQNVPPMVGMSLSGKPI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCE
DVIEMSKKEPVLVYFWTTWCVACKFVTPVVDWFSSSYPVVGVSLTSGKDERVQRYMNAKG
EEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCC
YSYDNINDTQGKIARDWGISLTPTLIVINDGKVTSVTSGITTPIGIAARLWLAKY
CCCCCCCCCCCCEECCCCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]