| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is fhuB [H]
Identifier: 218710093
GI number: 218710093
Start: 2269683
End: 2271680
Strand: Direct
Name: fhuB [H]
Synonym: VS_2114
Alternate gene names: 218710093
Gene position: 2269683-2271680 (Clockwise)
Preceding gene: 218710092
Following gene: 218710094
Centisome position: 68.79
GC content: 49.25
Gene sequence:
>1998_bases ATGGCTACCGCAAAGATCGAAAAAACCGTCACCGGGCGATTCAGTATCAAGGCAGCGGCACTACCTGTCGCTGCTGTTTT GTTGATCAGCTCGCTACTGCAAATTACCGCTCCTTACTCGCAAGGGGTTGGCTTGATTTGGGATACGCTGTTTCACTTTG ATTCTTCAAATTATCAGCATCTGATTACTCACCTCACCTATTTACCTAGGCTTACCGTCGCTCTCATTTGTGGTTTTGCA CTGGCAGTCGCTGGGTGTGTGATGCAATTTGTACTGCGTAACCCCATTGCCTCACCTACCACATTGGGTGTTGCTGCGGG CGCAGAACTCGGCATGGTATTAGGGATCCTTTTAATTCCTGCTAACCTAGCTATCCCAGGGTTTATTCCCGCTTTCATTG GGGGCTGCCTTGCAACAGGCTTAGTTTTTACCTTAAGTTCTGCACGAGGCTTTTCACCATTACACATGGTGTTAGCCGGT ATGGTGGTCAGCCTATTTTTAGGCTCACTCAACACCATGTTGCTCATGCTGCATGAACAACGGCTTACCAGTATTTTTGT TTGGGGTGCAGGTGTACTGAATCAGAATGATTGGTCGAGCGTGCAGGTTCTCATACCTTTAGTCTCGATCCCGACGCTGT TATTACTGGTTTTACAGCGTCCATTATCAGCGCTGCAATTTGGCGATAATGTCGCCACTTCGCTTGGTGTAAACATCAAA CAAATCAAATTGCTTTGCTTATCGTTGGCGATCTTTATTACTGCAGCCGTAGTCAGTGAAGTAGGCTTAATCGGATTCGT TGGCATTGTGGCTCCTGCTATCGCTAGGCTTATCGGTGTAAGAGCACTCGCGAAACAGATTCTGGTCAGCGGGTTGGTAG GCAGCTTCATTCTATTGATTGTGGATTTAGTGATTCAGCCCTTCTCTGGCTTCGGTGGCGAACTGCTCCCTACCGGCGCA ATGACGGCGCTACTGGGTGCTCCTTTCTTATTGTGGTTACTGCAACGTACCAAGCTGCAGTCCGATCTCAAAAACCGCAG TGAAACCATTGAGCACTACAAATTCGTCAGTACGCGTAAAGTACTTGCCGCGATGTCAGTACTATTGATGGCAATGTGTG TTCTTACCCTTACAGTAGGTAAAAACCAGTTCGGCTGGAATGTTGAACTCAACCCATCGCTATTCGATCTACGTCTACCG CGTGTATTAGTCGCGCTATTGGCAGGGATCGGGCTTGCGTTTGCAGGCACGATTATTCAACGCATCTCAAACAACCCAAT GGCGAGCCCCGAAGTATTGGGGATCAGCTCAGGGGCTGCTCTGGCGTTAGTGCTCGGCACACTATTTGGCACAGCAGTCG GCCGAGAAGAGCAAATGCTGCTTGGTACACTCGGCGCAACTTCAGTGACTGCCGTGGTTTGGTTAATGGGAAGAAAACAC AATTTCGCCCCAACGCAAACCTTGTTAACAGGCATCGCGCTAAGTGCAGGGCTCGACGCTCTACTGCGCATCACAATGAG CTCGGGTAATGAGAATGCAACCGCGCTCCTCACTTGGCTTTCAGGATCGACTTATTTAGTCGCTAATCAAGATGTCATTT TGCTCGCCGTTGGGGTTACCATCATCAGTGCAGTGGCGCTGTCTTTGAATCGCTGGATAGAGCTGATTAACTTAGGCGAC GTCACCACAAGCAGCCTAGGTATGAACACAACCGCTGTTCGATTGGCTTTGCTTTTGCTAGTCGCGGCACTAACAACTCT GTGCACCATCGTCATTGGGCCATTAAGTTTCATTGGATTATTGGCGCCGCACATGGCGCGTTCGCTTCACCAATATCGCG CGATTCCTCAAATGCTCACTGCAGCATTATTAGGCGCTATCATCATGGTGGCTGCCGACTGGATTGGTCGTACGCTATGG TTCCCTTGGCAGTTCCCTGCAGGTCTATTAGCCTCTCTGATTGGTGGCGGCTACTTCCTCTATCTAATGAGAAAATAA
Upstream 100 bases:
>100_bases CAGACTCCGTTTACGAACTTCCTACCATCTGGACCTTCGGTGGGCTAATCGCCGCTCAAAGGTTTAGTGACCACATTACC GAACTGCTTATCCAAAAATA
Downstream 100 bases:
>100_bases GCACACACGAGAAGTCACTTTCTCCGCCTTAAGCCCCGTTTGAAGCCTCTATTTGAGTCGAGGCTTTAAGCGGGCTCTCT TCTTACCCACTCATCACCGC
Product: iron-hydroxamate transporter permease subunit
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein B; Ferrichrome transport system permease protein fhuB; Ferrichrome uptake protein fhuB; Iron(III)-hydroxamate import system permease protein fhuB [H]
Number of amino acids: Translated: 665; Mature: 664
Protein sequence:
>665_residues MATAKIEKTVTGRFSIKAAALPVAAVLLISSLLQITAPYSQGVGLIWDTLFHFDSSNYQHLITHLTYLPRLTVALICGFA LAVAGCVMQFVLRNPIASPTTLGVAAGAELGMVLGILLIPANLAIPGFIPAFIGGCLATGLVFTLSSARGFSPLHMVLAG MVVSLFLGSLNTMLLMLHEQRLTSIFVWGAGVLNQNDWSSVQVLIPLVSIPTLLLLVLQRPLSALQFGDNVATSLGVNIK QIKLLCLSLAIFITAAVVSEVGLIGFVGIVAPAIARLIGVRALAKQILVSGLVGSFILLIVDLVIQPFSGFGGELLPTGA MTALLGAPFLLWLLQRTKLQSDLKNRSETIEHYKFVSTRKVLAAMSVLLMAMCVLTLTVGKNQFGWNVELNPSLFDLRLP RVLVALLAGIGLAFAGTIIQRISNNPMASPEVLGISSGAALALVLGTLFGTAVGREEQMLLGTLGATSVTAVVWLMGRKH NFAPTQTLLTGIALSAGLDALLRITMSSGNENATALLTWLSGSTYLVANQDVILLAVGVTIISAVALSLNRWIELINLGD VTTSSLGMNTTAVRLALLLLVAALTTLCTIVIGPLSFIGLLAPHMARSLHQYRAIPQMLTAALLGAIIMVAADWIGRTLW FPWQFPAGLLASLIGGGYFLYLMRK
Sequences:
>Translated_665_residues MATAKIEKTVTGRFSIKAAALPVAAVLLISSLLQITAPYSQGVGLIWDTLFHFDSSNYQHLITHLTYLPRLTVALICGFA LAVAGCVMQFVLRNPIASPTTLGVAAGAELGMVLGILLIPANLAIPGFIPAFIGGCLATGLVFTLSSARGFSPLHMVLAG MVVSLFLGSLNTMLLMLHEQRLTSIFVWGAGVLNQNDWSSVQVLIPLVSIPTLLLLVLQRPLSALQFGDNVATSLGVNIK QIKLLCLSLAIFITAAVVSEVGLIGFVGIVAPAIARLIGVRALAKQILVSGLVGSFILLIVDLVIQPFSGFGGELLPTGA MTALLGAPFLLWLLQRTKLQSDLKNRSETIEHYKFVSTRKVLAAMSVLLMAMCVLTLTVGKNQFGWNVELNPSLFDLRLP RVLVALLAGIGLAFAGTIIQRISNNPMASPEVLGISSGAALALVLGTLFGTAVGREEQMLLGTLGATSVTAVVWLMGRKH NFAPTQTLLTGIALSAGLDALLRITMSSGNENATALLTWLSGSTYLVANQDVILLAVGVTIISAVALSLNRWIELINLGD VTTSSLGMNTTAVRLALLLLVAALTTLCTIVIGPLSFIGLLAPHMARSLHQYRAIPQMLTAALLGAIIMVAADWIGRTLW FPWQFPAGLLASLIGGGYFLYLMRK >Mature_664_residues ATAKIEKTVTGRFSIKAAALPVAAVLLISSLLQITAPYSQGVGLIWDTLFHFDSSNYQHLITHLTYLPRLTVALICGFAL AVAGCVMQFVLRNPIASPTTLGVAAGAELGMVLGILLIPANLAIPGFIPAFIGGCLATGLVFTLSSARGFSPLHMVLAGM VVSLFLGSLNTMLLMLHEQRLTSIFVWGAGVLNQNDWSSVQVLIPLVSIPTLLLLVLQRPLSALQFGDNVATSLGVNIKQ IKLLCLSLAIFITAAVVSEVGLIGFVGIVAPAIARLIGVRALAKQILVSGLVGSFILLIVDLVIQPFSGFGGELLPTGAM TALLGAPFLLWLLQRTKLQSDLKNRSETIEHYKFVSTRKVLAAMSVLLMAMCVLTLTVGKNQFGWNVELNPSLFDLRLPR VLVALLAGIGLAFAGTIIQRISNNPMASPEVLGISSGAALALVLGTLFGTAVGREEQMLLGTLGATSVTAVVWLMGRKHN FAPTQTLLTGIALSAGLDALLRITMSSGNENATALLTWLSGSTYLVANQDVILLAVGVTIISAVALSLNRWIELINLGDV TTSSLGMNTTAVRLALLLLVAALTTLCTIVIGPLSFIGLLAPHMARSLHQYRAIPQMLTAALLGAIIMVAADWIGRTLWF PWQFPAGLLASLIGGGYFLYLMRK
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786347, Length=640, Percent_Identity=40.625, Blast_Score=351, Evalue=8e-98, Organism=Escherichia coli, GI1790741, Length=277, Percent_Identity=39.7111913357401, Blast_Score=145, Evalue=7e-36, Organism=Escherichia coli, GI1790740, Length=324, Percent_Identity=33.641975308642, Blast_Score=133, Evalue=4e-32, Organism=Escherichia coli, GI1786804, Length=227, Percent_Identity=31.7180616740088, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI1786805, Length=279, Percent_Identity=32.258064516129, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1788004, Length=269, Percent_Identity=30.1115241635688, Blast_Score=90, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 - InterPro: IPR006311 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 70338; Mature: 70207
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS00146 BETA_LACTAMASE_A ; PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAKIEKTVTGRFSIKAAALPVAAVLLISSLLQITAPYSQGVGLIWDTLFHFDSSNYQH CCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCCCCHHH LITHLTYLPRLTVALICGFALAVAGCVMQFVLRNPIASPTTLGVAAGAELGMVLGILLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHH ANLAIPGFIPAFIGGCLATGLVFTLSSARGFSPLHMVLAGMVVSLFLGSLNTMLLMLHEQ HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTSIFVWGAGVLNQNDWSSVQVLIPLVSIPTLLLLVLQRPLSALQFGDNVATSLGVNIK HHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHH QIKLLCLSLAIFITAAVVSEVGLIGFVGIVAPAIARLIGVRALAKQILVSGLVGSFILLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDLVIQPFSGFGGELLPTGAMTALLGAPFLLWLLQRTKLQSDLKNRSETIEHYKFVSTRK HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLAAMSVLLMAMCVLTLTVGKNQFGWNVELNPSLFDLRLPRVLVALLAGIGLAFAGTIIQ HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RISNNPMASPEVLGISSGAALALVLGTLFGTAVGREEQMLLGTLGATSVTAVVWLMGRKH HHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCC NFAPTQTLLTGIALSAGLDALLRITMSSGNENATALLTWLSGSTYLVANQDVILLAVGVT CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCEEEHHHHHH IISAVALSLNRWIELINLGDVTTSSLGMNTTAVRLALLLLVAALTTLCTIVIGPLSFIGL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPHMARSLHQYRAIPQMLTAALLGAIIMVAADWIGRTLWFPWQFPAGLLASLIGGGYFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEE YLMRK EEEEC >Mature Secondary Structure ATAKIEKTVTGRFSIKAAALPVAAVLLISSLLQITAPYSQGVGLIWDTLFHFDSSNYQH CCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCCCCHHH LITHLTYLPRLTVALICGFALAVAGCVMQFVLRNPIASPTTLGVAAGAELGMVLGILLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHH ANLAIPGFIPAFIGGCLATGLVFTLSSARGFSPLHMVLAGMVVSLFLGSLNTMLLMLHEQ HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTSIFVWGAGVLNQNDWSSVQVLIPLVSIPTLLLLVLQRPLSALQFGDNVATSLGVNIK HHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHH QIKLLCLSLAIFITAAVVSEVGLIGFVGIVAPAIARLIGVRALAKQILVSGLVGSFILLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDLVIQPFSGFGGELLPTGAMTALLGAPFLLWLLQRTKLQSDLKNRSETIEHYKFVSTRK HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLAAMSVLLMAMCVLTLTVGKNQFGWNVELNPSLFDLRLPRVLVALLAGIGLAFAGTIIQ HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RISNNPMASPEVLGISSGAALALVLGTLFGTAVGREEQMLLGTLGATSVTAVVWLMGRKH HHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCC NFAPTQTLLTGIALSAGLDALLRITMSSGNENATALLTWLSGSTYLVANQDVILLAVGVT CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCEEEHHHHHH IISAVALSLNRWIELINLGDVTTSSLGMNTTAVRLALLLLVAALTTLCTIVIGPLSFIGL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPHMARSLHQYRAIPQMLTAALLGAIIMVAADWIGRTLWFPWQFPAGLLASLIGGGYFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEE YLMRK EEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258 [H]