Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is cadC [C]

Identifier: 218709965

GI number: 218709965

Start: 2130272

End: 2131294

Strand: Reverse

Name: cadC [C]

Synonym: VS_1984

Alternate gene names: 218709965

Gene position: 2131294-2130272 (Counterclockwise)

Preceding gene: 218709966

Following gene: 218709964

Centisome position: 64.6

GC content: 42.03

Gene sequence:

>1023_bases
GTGAATCAACAAAACTACCAAATATGTGATGCTAACTATGATCCCTTGCTTAGGCAGTTTATGCGTGAGGATGGCCACGT
AGAAACTATCGCGCCGCTAGAAGGTAAAGTGTTCCTATTCTTGCTTGAAAATACAGGCGAATGCATTGAGCGAGGCCTGA
TCTTTGATAGATGTTGGGGGGATGTGATTGTCTCTGAGCAAGCGTTGACCAACGTGATATCTAAGCTTAGAAAAACACTG
AACAGAGTGACTTGTGGTTGCGCCACGATTCGTACCGTCAGTAAAATGGGGTATTCTCTGGAGATAGAGGAATCATCTCA
ACCTCAAAATACAGAGCCTAAAGCGACAGTCCCTGAGGCGGATTTAGTATCAGAGTCTCCTCAAACGATAGGATTATCGC
AAGCCGAACTTAACCCATCATCAATAACGACAAATCAAACACAAACCTCAGGCGAGTCACCTGAGAAAAAGCCGCAAGAT
GAGCAGGCTCATGTTATGCCTGCATCAGTAACACAAAGCGTTGAAGGCGACATGGAAATGCCATTGTCCACAGTTAGCCC
GAGAGGTTCAGTCAACGCGGTACCACCTAGCTTTAAGCTTTTTGTTCATCGTCATTTAGCCTGCATGGGCTACTTTTTAG
CCTTTACCTGTGTGTTGATCTCTTTGTTTAATATATTTCAGGCTTACTATCAGCCATTGCCATACTTTGTTGATAAAAAT
GAGTATCACGACAGCTTCGTAGATGAAACTAATCACTACTTTTTCCATATTGTTCGCAATGAAGCCTACTCGTTGCCTGC
GATCACTGAGAGACTGATACAAGTTATACCTAGCCACTGTAATGTTGATGTTTTTGTTCGCATTTATCCATCTGTCAACC
AACCTGAAAATGATGCTTTGTATATGCTGATTGAGAGAAAGGATGGCGAAGCTCTTAATTACTTGTCATCTATTTTTGAA
GTTGAGTCATCTTTTGATTCGTTTGTGAATTACATGGCTCAAAGGAGTTACTTTTGCGAATAA

Upstream 100 bases:

>100_bases
TTCTCGACGCGAAATAATTGTGTGTAAATTGAAAAATTCACTGGTCATTTATAAACTTTTCAATATTATATGCGACCAAA
TTCAAATGTAGACAACGATA

Downstream 100 bases:

>100_bases
TTGGTTTGCTATTGGTATTAGCACTCACAGCTGCAAGTTTCATGATTGATAGAAACGTATTAGCGGGCACTCGTTGGCAC
TGTAAAACCATCAAAACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNQQNYQICDANYDPLLRQFMREDGHVETIAPLEGKVFLFLLENTGECIERGLIFDRCWGDVIVSEQALTNVISKLRKTL
NRVTCGCATIRTVSKMGYSLEIEESSQPQNTEPKATVPEADLVSESPQTIGLSQAELNPSSITTNQTQTSGESPEKKPQD
EQAHVMPASVTQSVEGDMEMPLSTVSPRGSVNAVPPSFKLFVHRHLACMGYFLAFTCVLISLFNIFQAYYQPLPYFVDKN
EYHDSFVDETNHYFFHIVRNEAYSLPAITERLIQVIPSHCNVDVFVRIYPSVNQPENDALYMLIERKDGEALNYLSSIFE
VESSFDSFVNYMAQRSYFCE

Sequences:

>Translated_340_residues
MNQQNYQICDANYDPLLRQFMREDGHVETIAPLEGKVFLFLLENTGECIERGLIFDRCWGDVIVSEQALTNVISKLRKTL
NRVTCGCATIRTVSKMGYSLEIEESSQPQNTEPKATVPEADLVSESPQTIGLSQAELNPSSITTNQTQTSGESPEKKPQD
EQAHVMPASVTQSVEGDMEMPLSTVSPRGSVNAVPPSFKLFVHRHLACMGYFLAFTCVLISLFNIFQAYYQPLPYFVDKN
EYHDSFVDETNHYFFHIVRNEAYSLPAITERLIQVIPSHCNVDVFVRIYPSVNQPENDALYMLIERKDGEALNYLSSIFE
VESSFDSFVNYMAQRSYFCE
>Mature_340_residues
MNQQNYQICDANYDPLLRQFMREDGHVETIAPLEGKVFLFLLENTGECIERGLIFDRCWGDVIVSEQALTNVISKLRKTL
NRVTCGCATIRTVSKMGYSLEIEESSQPQNTEPKATVPEADLVSESPQTIGLSQAELNPSSITTNQTQTSGESPEKKPQD
EQAHVMPASVTQSVEGDMEMPLSTVSPRGSVNAVPPSFKLFVHRHLACMGYFLAFTCVLISLFNIFQAYYQPLPYFVDKN
EYHDSFVDETNHYFFHIVRNEAYSLPAITERLIQVIPSHCNVDVFVRIYPSVNQPENDALYMLIERKDGEALNYLSSIFE
VESSFDSFVNYMAQRSYFCE

Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38575; Mature: 38575

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQQNYQICDANYDPLLRQFMREDGHVETIAPLEGKVFLFLLENTGECIERGLIFDRCWG
CCCCCCEEECCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEECCCHHHHHHCCHHHHHHH
DVIVSEQALTNVISKLRKTLNRVTCGCATIRTVSKMGYSLEIEESSQPQNTEPKATVPEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCH
DLVSESPQTIGLSQAELNPSSITTNQTQTSGESPEKKPQDEQAHVMPASVTQSVEGDMEM
HHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCHHHHHHCCCCCCC
PLSTVSPRGSVNAVPPSFKLFVHRHLACMGYFLAFTCVLISLFNIFQAYYQPLPYFVDKN
CCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
EYHDSFVDETNHYFFHIVRNEAYSLPAITERLIQVIPSHCNVDVFVRIYPSVNQPENDAL
CHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEE
YMLIERKDGEALNYLSSIFEVESSFDSFVNYMAQRSYFCE
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNQQNYQICDANYDPLLRQFMREDGHVETIAPLEGKVFLFLLENTGECIERGLIFDRCWG
CCCCCCEEECCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEECCCHHHHHHCCHHHHHHH
DVIVSEQALTNVISKLRKTLNRVTCGCATIRTVSKMGYSLEIEESSQPQNTEPKATVPEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCH
DLVSESPQTIGLSQAELNPSSITTNQTQTSGESPEKKPQDEQAHVMPASVTQSVEGDMEM
HHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCHHHHHHCCCCCCC
PLSTVSPRGSVNAVPPSFKLFVHRHLACMGYFLAFTCVLISLFNIFQAYYQPLPYFVDKN
CCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
EYHDSFVDETNHYFFHIVRNEAYSLPAITERLIQVIPSHCNVDVFVRIYPSVNQPENDAL
CHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEE
YMLIERKDGEALNYLSSIFEVESSFDSFVNYMAQRSYFCE
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA