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The map label for this gene is ywbD [H]

Identifier: 218709958

GI number: 218709958

Start: 2121450

End: 2122406

Strand: Reverse

Name: ywbD [H]

Synonym: VS_1977

Alternate gene names: 218709958

Gene position: 2122406-2121450 (Counterclockwise)

Preceding gene: 218709959

Following gene: 218709954

Centisome position: 64.33

GC content: 45.66

Gene sequence:

>957_bases
GTGAGTGAAATAATGGAAGCATCAGCTTTACCTCTGTTTTTTAGTCATATTGAACAGCAATTGAATGAAGTGCCGAATGA
ACTACGTCGTATTTTTCACGGGCGTGGCAAGTTTTGGCCCGGCCTAGATCAACTCACTTGTGATTGGGTTGATGGACAGT
TATTGGTTAACGTGTTTAAAGAAGTGGACCAAGCGTTCTTATCATCTCTAAAGACTGGATTGGTCGACCTCACTAACAAA
GATATCTGGCAAGTAAAACAGGGCACAAGCATTGTGCTGCAACACCGTTATGCTGATGGCGCGCCCTCTGAAGTGTTGTG
GGGTCAATTGAACGACTCACCAGTCGTGGTTGAACATGGGCTTAAGTACCAACTAGACATTGGCCGCAATCAGAACTTCG
GTCTGTTCCTAGACATGCGTAATGGCCGTCAGTGGGTACAAGATAATGCTAAGGATAAGAACGTTCTTAACCTGTTCGCA
TACACTTGTGGTTTCTCTGTGGCGGCGATTGCGGGTGGCGCTCGACAATGCATGAACGTAGACATGTCACGCGGCTCGCT
AAACAAAGGCCGTGATAACCACCGCTTGAATGAGCATGACATGCGCTCGGTGAACTTCCTTGGCTACGACATCTTTAAGT
CGTGGGGAAAAATCAAGAAGGGTGGCCCATATGAGCTGGTTATTATCGATCCGCCTTCGTTCCAAAAAGGCAGCTTTGCA
CTTACTAAAGACTACAAAAAGATCTTACGTCGTTTGCCTGAGCTTCTAACCGAAGGTGGTGAAGTGATTGCTTGTGTTAA
CTCACCAGCAGTCTCACCAAACTTCTTGATTGAGACGATGGTAGAAGAAGCGCCAAGTGTTGAGTTTATCGAGCGTCTAG
ATAACCCACCTGAGTTTGTCGATGTTGACCCCGATTCAAGTTTGAAAGTCCTGAGATTTAAAATTAACGTTTCTTAA

Upstream 100 bases:

>100_bases
TCGACTCTTTGGGTGAGAAATGGCATCAAGAGATCGTGTCTAATGGTTTAGACAGTTGGCTTGAACCTTGGTCATTAACG
TGGCCAAAGCTAAACACTAA

Downstream 100 bases:

>100_bases
GACGCTTAATTGAGAGTTAACAAATATCAACGTTTGTGACCCGTCCTGATATGGGTTGACACTTGATTGACTAAAACGCT
CGATGTACTTCATCGGGCGT

Product: putative SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSEIMEASALPLFFSHIEQQLNEVPNELRRIFHGRGKFWPGLDQLTCDWVDGQLLVNVFKEVDQAFLSSLKTGLVDLTNK
DIWQVKQGTSIVLQHRYADGAPSEVLWGQLNDSPVVVEHGLKYQLDIGRNQNFGLFLDMRNGRQWVQDNAKDKNVLNLFA
YTCGFSVAAIAGGARQCMNVDMSRGSLNKGRDNHRLNEHDMRSVNFLGYDIFKSWGKIKKGGPYELVIIDPPSFQKGSFA
LTKDYKKILRRLPELLTEGGEVIACVNSPAVSPNFLIETMVEEAPSVEFIERLDNPPEFVDVDPDSSLKVLRFKINVS

Sequences:

>Translated_318_residues
MSEIMEASALPLFFSHIEQQLNEVPNELRRIFHGRGKFWPGLDQLTCDWVDGQLLVNVFKEVDQAFLSSLKTGLVDLTNK
DIWQVKQGTSIVLQHRYADGAPSEVLWGQLNDSPVVVEHGLKYQLDIGRNQNFGLFLDMRNGRQWVQDNAKDKNVLNLFA
YTCGFSVAAIAGGARQCMNVDMSRGSLNKGRDNHRLNEHDMRSVNFLGYDIFKSWGKIKKGGPYELVIIDPPSFQKGSFA
LTKDYKKILRRLPELLTEGGEVIACVNSPAVSPNFLIETMVEEAPSVEFIERLDNPPEFVDVDPDSSLKVLRFKINVS
>Mature_317_residues
SEIMEASALPLFFSHIEQQLNEVPNELRRIFHGRGKFWPGLDQLTCDWVDGQLLVNVFKEVDQAFLSSLKTGLVDLTNKD
IWQVKQGTSIVLQHRYADGAPSEVLWGQLNDSPVVVEHGLKYQLDIGRNQNFGLFLDMRNGRQWVQDNAKDKNVLNLFAY
TCGFSVAAIAGGARQCMNVDMSRGSLNKGRDNHRLNEHDMRSVNFLGYDIFKSWGKIKKGGPYELVIIDPPSFQKGSFAL
TKDYKKILRRLPELLTEGGEVIACVNSPAVSPNFLIETMVEEAPSVEFIERLDNPPEFVDVDPDSSLKVLRFKINVS

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=186, Percent_Identity=30.6451612903226, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1787181, Length=153, Percent_Identity=32.0261437908497, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 35905; Mature: 35774

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIMEASALPLFFSHIEQQLNEVPNELRRIFHGRGKFWPGLDQLTCDWVDGQLLVNVFK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHH
EVDQAFLSSLKTGLVDLTNKDIWQVKQGTSIVLQHRYADGAPSEVLWGQLNDSPVVVEHG
HHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCCCCCCHHEEECCCCCCEEEECC
LKYQLDIGRNQNFGLFLDMRNGRQWVQDNAKDKNVLNLFAYTCGFSVAAIAGGARQCMNV
CEEEEECCCCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCHHHHHCC
DMSRGSLNKGRDNHRLNEHDMRSVNFLGYDIFKSWGKIKKGGPYELVIIDPPSFQKGSFA
CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCH
LTKDYKKILRRLPELLTEGGEVIACVNSPAVSPNFLIETMVEEAPSVEFIERLDNPPEFV
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEE
DVDPDSSLKVLRFKINVS
ECCCCCCEEEEEEEEECC
>Mature Secondary Structure 
SEIMEASALPLFFSHIEQQLNEVPNELRRIFHGRGKFWPGLDQLTCDWVDGQLLVNVFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHH
EVDQAFLSSLKTGLVDLTNKDIWQVKQGTSIVLQHRYADGAPSEVLWGQLNDSPVVVEHG
HHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCCCCCCHHEEECCCCCCEEEECC
LKYQLDIGRNQNFGLFLDMRNGRQWVQDNAKDKNVLNLFAYTCGFSVAAIAGGARQCMNV
CEEEEECCCCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCHHHHHCC
DMSRGSLNKGRDNHRLNEHDMRSVNFLGYDIFKSWGKIKKGGPYELVIIDPPSFQKGSFA
CCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCH
LTKDYKKILRRLPELLTEGGEVIACVNSPAVSPNFLIETMVEEAPSVEFIERLDNPPEFV
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEE
DVDPDSSLKVLRFKINVS
ECCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]