Click here to switch to the map view.

The map label for this gene is yqeZ [H]

Identifier: 218709954

GI number: 218709954

Start: 2116927

End: 2118333

Strand: Reverse

Name: yqeZ [H]

Synonym: VS_1973

Alternate gene names: 218709954

Gene position: 2118333-2116927 (Counterclockwise)

Preceding gene: 218709958

Following gene: 218709953

Centisome position: 64.21

GC content: 49.11

Gene sequence:

>1407_bases
ATGACTTTTATATTAAAGTACTTGTTTGCGTTTCTTCTGTTGTTCAGCTCTGTGTTCGCTCAGGCCGATGATGTCTGGGT
GATTGAGGTGAACGGAGGGATAGGTCCGGCGACCAGTGATTACCTCACTAGAGAAATAGAACAAGCTCACGATGAGCAAG
CAAAACTCATCATTTTGAAAATGAATACGCCTGGCGGGTTAGATTCGTCGATGCGTGACATTATTCGATCCATCACCACC
TCACCGATTCCAGTCGCTACTTGGGTTGGGCCTGCGGGTTCGCGAGCAGCGAGCGCCGGAACCTATATTTTACTTGCCAG
CCACGTTGCTTCCATGGCGCCCGGAACTAATCTAGGTGCAGCAACCCCTGTGTCTCTTGTCGGTGGCAAAACGCCGACTA
ATCCTTTGTCGCCTCAAGATGAGGCCAATAAAGACGACAACACTTCTGCGAGTGAGCAAGACGCAACGAAACAAGAGAAT
TCAGATCAAGTAAAAGCCACCACTGCGATGGAAAAGAAAGTCATCAATGATGCAGCGGCTTACATTGTCAGTTTGGCCAA
GTTACACAACCGTAACGAAGAATGGGCAGAAAAAGCGGTAAGAGAGGCAGCAAGTTTGGATTCTGAGAATGCACTGACTC
TTAACGTGATTGATTTTATTGCCAGCGACCTTCAGCAATTGGTTGAACTGAGCAACGGACGCACCATCACCATCAACGGT
GTCAGTCAGGAAGTCCAACTTAGTGATGTTGCTTTTGTCGAGCGAGAACAAGACTGGCGCTTTAGTTTGCTGTCAGTGAT
CACGAACCCGAACGTTGCATATATTTTGATGCTGATTGGTATCTACGGTTTGTTACTCGAATTCTATAACCCTGGCGTCG
GGCTACCGGGTGTATTGGGGGGGATCTGTCTGTTACTGGCAATGTACTCCTTACAAATGCTGCCGGTGAGTTACGCAGGC
CTTGCGTTGATTCTGCTTGGAATTGCCTTAATGGTGGCAGAGGCCTTTAGCCCGAGCTTCGGGATTTTCGGTTTGGGTGG
CGTCGCCGCATTCACATTGGGCTCGATCATGCTGATGGATACCGAAGTGCCGGGTTATCAAATCGCATTGCCGTTAATTA
TCGGTATTAGCCTATTCTCTGTCGCTTTTATCGTTGTAACGATCTCTATGCTAGTCCGAGTGAGAAACAAGCCGGTGACT
ACGGGGATGGAAGCGGTTGTCGGCGACACTGGCAAAGTGGTAAGCGGCTTCCCCGGTACGGGTCGAGTATTGGTTGAAGG
TGAGATCTGGCAAGCCAAATGTGCGAGTGAATTGCAAGCGGGGCAGCTTATTAGAGTGACCAAACTGACTGGGTTGTTGT
TGGATGTTGAGGCGTTGCCCGATGAGACATCATCGAAATCTAGCTAG

Upstream 100 bases:

>100_bases
AGCCTGAACTATGCTTAAGGTATCTATTTATTACCAAGATGTTACCTCTGCGCTTTAAATAAAACGTCTATCTAGCATCT
CAGTTGTAAGGAGAGGGGCT

Downstream 100 bases:

>100_bases
CGCGACATGCTAGAACAAACTTGATTGAATTATTTATTGCTTAACCATCGTTACCATTAGGGGGCGGTTATGTTTATACA
CACTATAGGTATTGTCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MTFILKYLFAFLLLFSSVFAQADDVWVIEVNGGIGPATSDYLTREIEQAHDEQAKLIILKMNTPGGLDSSMRDIIRSITT
SPIPVATWVGPAGSRAASAGTYILLASHVASMAPGTNLGAATPVSLVGGKTPTNPLSPQDEANKDDNTSASEQDATKQEN
SDQVKATTAMEKKVINDAAAYIVSLAKLHNRNEEWAEKAVREAASLDSENALTLNVIDFIASDLQQLVELSNGRTITING
VSQEVQLSDVAFVEREQDWRFSLLSVITNPNVAYILMLIGIYGLLLEFYNPGVGLPGVLGGICLLLAMYSLQMLPVSYAG
LALILLGIALMVAEAFSPSFGIFGLGGVAAFTLGSIMLMDTEVPGYQIALPLIIGISLFSVAFIVVTISMLVRVRNKPVT
TGMEAVVGDTGKVVSGFPGTGRVLVEGEIWQAKCASELQAGQLIRVTKLTGLLLDVEALPDETSSKSS

Sequences:

>Translated_468_residues
MTFILKYLFAFLLLFSSVFAQADDVWVIEVNGGIGPATSDYLTREIEQAHDEQAKLIILKMNTPGGLDSSMRDIIRSITT
SPIPVATWVGPAGSRAASAGTYILLASHVASMAPGTNLGAATPVSLVGGKTPTNPLSPQDEANKDDNTSASEQDATKQEN
SDQVKATTAMEKKVINDAAAYIVSLAKLHNRNEEWAEKAVREAASLDSENALTLNVIDFIASDLQQLVELSNGRTITING
VSQEVQLSDVAFVEREQDWRFSLLSVITNPNVAYILMLIGIYGLLLEFYNPGVGLPGVLGGICLLLAMYSLQMLPVSYAG
LALILLGIALMVAEAFSPSFGIFGLGGVAAFTLGSIMLMDTEVPGYQIALPLIIGISLFSVAFIVVTISMLVRVRNKPVT
TGMEAVVGDTGKVVSGFPGTGRVLVEGEIWQAKCASELQAGQLIRVTKLTGLLLDVEALPDETSSKSS
>Mature_467_residues
TFILKYLFAFLLLFSSVFAQADDVWVIEVNGGIGPATSDYLTREIEQAHDEQAKLIILKMNTPGGLDSSMRDIIRSITTS
PIPVATWVGPAGSRAASAGTYILLASHVASMAPGTNLGAATPVSLVGGKTPTNPLSPQDEANKDDNTSASEQDATKQENS
DQVKATTAMEKKVINDAAAYIVSLAKLHNRNEEWAEKAVREAASLDSENALTLNVIDFIASDLQQLVELSNGRTITINGV
SQEVQLSDVAFVEREQDWRFSLLSVITNPNVAYILMLIGIYGLLLEFYNPGVGLPGVLGGICLLLAMYSLQMLPVSYAGL
ALILLGIALMVAEAFSPSFGIFGLGGVAAFTLGSIMLMDTEVPGYQIALPLIIGISLFSVAFIVVTISMLVRVRNKPVTT
GMEAVVGDTGKVVSGFPGTGRVLVEGEIWQAKCASELQAGQLIRVTKLTGLLLDVEALPDETSSKSS

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 49717; Mature: 49586

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFILKYLFAFLLLFSSVFAQADDVWVIEVNGGIGPATSDYLTREIEQAHDEQAKLIILK
CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEE
MNTPGGLDSSMRDIIRSITTSPIPVATWVGPAGSRAASAGTYILLASHVASMAPGTNLGA
ECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
ATPVSLVGGKTPTNPLSPQDEANKDDNTSASEQDATKQENSDQVKATTAMEKKVINDAAA
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
YIVSLAKLHNRNEEWAEKAVREAASLDSENALTLNVIDFIASDLQQLVELSNGRTITING
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEEC
VSQEVQLSDVAFVEREQDWRFSLLSVITNPNVAYILMLIGIYGLLLEFYNPGVGLPGVLG
CCCEEEHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
GICLLLAMYSLQMLPVSYAGLALILLGIALMVAEAFSPSFGIFGLGGVAAFTLGSIMLMD
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEE
TEVPGYQIALPLIIGISLFSVAFIVVTISMLVRVRNKPVTTGMEAVVGDTGKVVSGFPGT
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECCCCC
GRVLVEGEIWQAKCASELQAGQLIRVTKLTGLLLDVEALPDETSSKSS
CEEEEECCHHHHHHHHHHHCCCEEEHHHHHHHHEEHHHCCCCCCCCCC
>Mature Secondary Structure 
TFILKYLFAFLLLFSSVFAQADDVWVIEVNGGIGPATSDYLTREIEQAHDEQAKLIILK
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEE
MNTPGGLDSSMRDIIRSITTSPIPVATWVGPAGSRAASAGTYILLASHVASMAPGTNLGA
ECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
ATPVSLVGGKTPTNPLSPQDEANKDDNTSASEQDATKQENSDQVKATTAMEKKVINDAAA
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
YIVSLAKLHNRNEEWAEKAVREAASLDSENALTLNVIDFIASDLQQLVELSNGRTITING
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEEC
VSQEVQLSDVAFVEREQDWRFSLLSVITNPNVAYILMLIGIYGLLLEFYNPGVGLPGVLG
CCCEEEHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
GICLLLAMYSLQMLPVSYAGLALILLGIALMVAEAFSPSFGIFGLGGVAAFTLGSIMLMD
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEE
TEVPGYQIALPLIIGISLFSVAFIVVTISMLVRVRNKPVTTGMEAVVGDTGKVVSGFPGT
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECCCCC
GRVLVEGEIWQAKCASELQAGQLIRVTKLTGLLLDVEALPDETSSKSS
CEEEEECCHHHHHHHHHHHCCCEEEHHHHHHHHEEHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]