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The map label for this gene is yiaN [C]

Identifier: 218709899

GI number: 218709899

Start: 2055414

End: 2056697

Strand: Reverse

Name: yiaN [C]

Synonym: VS_1912

Alternate gene names: 218709899

Gene position: 2056697-2055414 (Counterclockwise)

Preceding gene: 218709900

Following gene: 218709898

Centisome position: 62.34

GC content: 47.2

Gene sequence:

>1284_bases
ATGATTGGAATAGTAATGTTTTTCGTAGCCTTGTTTGCACTTTTACTAGGCTTCCCGGTGGCGTTTACCTTTGGTGGTAT
CGCGCTAATCTTTGGTGTTTGGGCGGAAGGCATCGAAATGTTTGCCTTCATGCCATATCGAATTCAATCAATCATGGAAA
ATACGGTGCTGATGGCCGTTCCATTGTTTGTTTTCATGGGACTTGTTCTACAAAAGACTAAGCTTGCTGAGCAGTTACTT
GAGTCTATGGGACGACTGTTTGGTGGTGTACGAGGTGGTATCGCAATCTCGACAGTTCTCGTAGGTTCACTGCTTGCCGC
TTCAACCGGTGTGGTAGGCGCTTCTGTGGTTGCAATGGGGCTTATCTCGTTGCCCGTCATGCTCAAGTACAACTACGACA
AAGGCTTAGCCTGCGGCACCATCTGTGCGTCTGGTACGTTAGGGCAAATCATTCCGCCATCCATCGTCTTGATTCTATTG
GGGGACGTATTGGGTGTTCCGGTAGGTGACTTGTTCCAAGCCGCGATTTGGCCGGGCGTGATGTTAGTGGGGGCTTATAT
CGTTTATATCTTAATATACGCGAAGCTTAACCCTGAAGCCGCTCAACCAATTGAGCGTGATGATTCCATCAGCCGTAAAC
AAGAAGTCATCAACGCATTGAAAGCAATCATACCGCCACTCGCGCTGATTATTGTCGTATTAGGCTCTATCTTTGCGGGT
GTTGCTACGCCGACAGAGTCTGCTGCTCTGGGTGGTGCGGGTGCGATGGTACTCGCTTTGCTCTACGGTCAGTTTAGTTG
GTCGATGGTGTATGACGCCTCTAAAGAGACGGTCAAAGTAACGGCAATGGTATTTGCTATCTTGTTGGGTGCAACGGCAT
TCTCAATGGCGTTTACTTATACTGGCGGTGATTATCTGGTTGAAGAATGGATGCTGCAGTTGCCGGGTGAGAAGTGGGGT
TTCTTGATCATTACCATGTTGGTGATTTTGATTCTGGGTTTCTTCATCGACTTCGTAGAAATCTGTTTCATCATTGTGCC
GATTATTGCGCCTGTTGCTGAACTGATGGGAATCAACATGACTTGGTTCGCAATCCTTATCGCGATGAACCTTCAAACCT
CATTCTTGACGCCACCGTTTGGCTTCAGTTTGTTCTATCTAAAAGGGGTGGCACCAAAAGGTGTGACTACCAAGGATATC
TACCGAGGCGTGATGCCTTTCATTTTGATTCAAATCCTCGTACTTGGATCACTTCTCGCTTTCCCATCTTTCTATGGAAT
GTGA

Upstream 100 bases:

>100_bases
GATCCTGCACTCGTTGAACAAAATTTTTAATCCCCATCTCATCCATGCAAATAACACGCATGCAAACAATATTCATACAA
AGAATAAGTAGAGGCTGAAC

Downstream 100 bases:

>100_bases
GTGAAGCCTAGAATGTGAATGATATGTTTCAACGGCTATCCATAAATTGATAAAGTAAAACGGCTTATTGATGTTCAATA
AGCCGTTTTTTGTGAGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MIGIVMFFVALFALLLGFPVAFTFGGIALIFGVWAEGIEMFAFMPYRIQSIMENTVLMAVPLFVFMGLVLQKTKLAEQLL
ESMGRLFGGVRGGIAISTVLVGSLLAASTGVVGASVVAMGLISLPVMLKYNYDKGLACGTICASGTLGQIIPPSIVLILL
GDVLGVPVGDLFQAAIWPGVMLVGAYIVYILIYAKLNPEAAQPIERDDSISRKQEVINALKAIIPPLALIIVVLGSIFAG
VATPTESAALGGAGAMVLALLYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYTGGDYLVEEWMLQLPGEKWG
FLIITMLVILILGFFIDFVEICFIIVPIIAPVAELMGINMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKGVTTKDI
YRGVMPFILIQILVLGSLLAFPSFYGM

Sequences:

>Translated_427_residues
MIGIVMFFVALFALLLGFPVAFTFGGIALIFGVWAEGIEMFAFMPYRIQSIMENTVLMAVPLFVFMGLVLQKTKLAEQLL
ESMGRLFGGVRGGIAISTVLVGSLLAASTGVVGASVVAMGLISLPVMLKYNYDKGLACGTICASGTLGQIIPPSIVLILL
GDVLGVPVGDLFQAAIWPGVMLVGAYIVYILIYAKLNPEAAQPIERDDSISRKQEVINALKAIIPPLALIIVVLGSIFAG
VATPTESAALGGAGAMVLALLYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYTGGDYLVEEWMLQLPGEKWG
FLIITMLVILILGFFIDFVEICFIIVPIIAPVAELMGINMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKGVTTKDI
YRGVMPFILIQILVLGSLLAFPSFYGM
>Mature_427_residues
MIGIVMFFVALFALLLGFPVAFTFGGIALIFGVWAEGIEMFAFMPYRIQSIMENTVLMAVPLFVFMGLVLQKTKLAEQLL
ESMGRLFGGVRGGIAISTVLVGSLLAASTGVVGASVVAMGLISLPVMLKYNYDKGLACGTICASGTLGQIIPPSIVLILL
GDVLGVPVGDLFQAAIWPGVMLVGAYIVYILIYAKLNPEAAQPIERDDSISRKQEVINALKAIIPPLALIIVVLGSIFAG
VATPTESAALGGAGAMVLALLYGQFSWSMVYDASKETVKVTAMVFAILLGATAFSMAFTYTGGDYLVEEWMLQLPGEKWG
FLIITMLVILILGFFIDFVEICFIIVPIIAPVAELMGINMTWFAILIAMNLQTSFLTPPFGFSLFYLKGVAPKGVTTKDI
YRGVMPFILIQILVLGSLLAFPSFYGM

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=398, Percent_Identity=26.6331658291457, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45749; Mature: 45749

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCC
>Mature Secondary Structure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HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]