Click here to switch to the map view.

The map label for this gene is nrdI [H]

Identifier: 218709886

GI number: 218709886

Start: 2041052

End: 2041450

Strand: Reverse

Name: nrdI [H]

Synonym: VS_1899

Alternate gene names: 218709886

Gene position: 2041450-2041052 (Counterclockwise)

Preceding gene: 218709887

Following gene: 218709885

Centisome position: 61.88

GC content: 44.86

Gene sequence:

>399_bases
ATGATTGTTTATTATTCTAGCGCTTCAGGGAATACGAAGCGGTTTGTCGAACAGCTAGGATTACCTGCGATCAGGCTTCC
TACTGAGGCCAATGAAAGGGCGCTAGAGATTGAGCAACCATTCGTACTCATATGCCCGACTTATGCCGATGGTGAGGGGC
GAGGAGCTGTGCCTAACTCTGTTATAAGTCTATTGAATAACCCGAATAATCGAGCATTGATTAAAGGTGTGATTGCTTCG
GGAAATCGAAACTTTGGAGCTCTTTTTGCTCGCGGAGGTGCCATTGTCGCTGAAAAATGCAATGTGCCGCTGTTGTACCG
TTTCGAACTATCTGGAACCCAGAGCGATATTGATATCGTGACAAATGGGTTAGAACAATTTTGGAAACATCATGGATAA

Upstream 100 bases:

>100_bases
AAAGGGTTCAATCAATGGGGTATCGACAAGCTCCCGTGGTTGTCGCCAATGACCGCCATTGGTCCGGTTTTAGACCTGAC
ATGATCAGCGCGTTGGGTTA

Downstream 100 bases:

>100_bases
CCACTTTGAGAACGAGTCCCTTGACTACCATGCTTTAAACGCAATGTTGAATCTACTTGATGAACAAGGGACGATTCAGT
TTGAGGCAGATAAGCAAGCG

Product: NrdI protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MIVYYSSASGNTKRFVEQLGLPAIRLPTEANERALEIEQPFVLICPTYADGEGRGAVPNSVISLLNNPNNRALIKGVIAS
GNRNFGALFARGGAIVAEKCNVPLLYRFELSGTQSDIDIVTNGLEQFWKHHG

Sequences:

>Translated_132_residues
MIVYYSSASGNTKRFVEQLGLPAIRLPTEANERALEIEQPFVLICPTYADGEGRGAVPNSVISLLNNPNNRALIKGVIAS
GNRNFGALFARGGAIVAEKCNVPLLYRFELSGTQSDIDIVTNGLEQFWKHHG
>Mature_132_residues
MIVYYSSASGNTKRFVEQLGLPAIRLPTEANERALEIEQPFVLICPTYADGEGRGAVPNSVISLLNNPNNRALIKGVIAS
GNRNFGALFARGGAIVAEKCNVPLLYRFELSGTQSDIDIVTNGLEQFWKHHG

Specific function: Probably involved in ribonucleotide reductase function [H]

COG id: COG1780

COG function: function code F; Protein involved in ribonucleotide reduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrdI family [H]

Homologues:

Organism=Escherichia coli, GI1789029, Length=131, Percent_Identity=54.1984732824427, Blast_Score=158, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020852
- InterPro:   IPR004465 [H]

Pfam domain/function: PF07972 Flavodoxin_NdrI [H]

EC number: NA

Molecular weight: Translated: 14361; Mature: 14361

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVYYSSASGNTKRFVEQLGLPAIRLPTEANERALEIEQPFVLICPTYADGEGRGAVPNS
CEEEEECCCCCHHHHHHHHCCCEEECCCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHH
VISLLNNPNNRALIKGVIASGNRNFGALFARGGAIVAEKCNVPLLYRFELSGTQSDIDIV
HHHHHCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCHHHHH
TNGLEQFWKHHG
HHHHHHHHHHCC
>Mature Secondary Structure
MIVYYSSASGNTKRFVEQLGLPAIRLPTEANERALEIEQPFVLICPTYADGEGRGAVPNS
CEEEEECCCCCHHHHHHHHCCCEEECCCCCCCCEEEECCCEEEEEECCCCCCCCCCCHHH
VISLLNNPNNRALIKGVIASGNRNFGALFARGGAIVAEKCNVPLLYRFELSGTQSDIDIV
HHHHHCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCHHHHH
TNGLEQFWKHHG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA