Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709864

Identifier: 218709864

GI number: 218709864

Start: 2023127

End: 2023669

Strand: Reverse

Name: 218709864

Synonym: VS_1877

Alternate gene names: NA

Gene position: 2023669-2023127 (Counterclockwise)

Preceding gene: 218709865

Following gene: 218709863

Centisome position: 61.34

GC content: 37.94

Gene sequence:

>543_bases
TTGGAAAACGTATTCATCTTTGGTTCTAGTATTCTTAGTGTAATTAGTCTTGCGATTGTTGGCTGGTTTACGAAGAGTTA
TTTTCCTAGCTATATGAAAGAAAAAGGAAAAAATACTGCCACAAAAGAAGATATTGAAGATATTACTAAAATTGTAGAGT
GGGTTAAGCAACGTAGCGCTGCTGAACTTGAAGAGCTGAAGTCAGCACTAAACGAGCAAGACAAACTTCTCGAAAAAAGA
AGAGAGGTGTATGAGGACATTGTTGAGTCTTTACGTCTTTTTATTACTGGTCACCCTGCAACCGATGAGCAAAAGTTTCA
TTTTTACTCTGCGTGTTCTAAGGCTTGGCTATGGGCACCCGACCCAGTGTTACTAGCGTTGAATGAGTTCTTAGATATCC
AAGTTCAATTGGCTCAAAGGGATGGTAGTGTAGATCAGCAGACAGCTAAAGCTAAATATGAAAAGGTAGTATTAGAAATG
CGTAAAGATGTTGGTTTTTCAACAACTACGGAAAGAAAATACAGATTCGTCACGTTCAATTGA

Upstream 100 bases:

>100_bases
TTTTGGTTTGAATTAAGTTTAGTGTTTACGGCGTTCAATTTAAGTGTCGTGGTAGCGTGGCTCACACCTTAATTGGGCGT
TAGCACTCAAGGAGTAAAAA

Downstream 100 bases:

>100_bases
GCAGAGTGCTAACAAACAATGTAAGAGTGATTCAGCACGTTTGGCATTTTTGGTTTGGATTGAGTTTTGTGTTTACGATG
GTCAAATTAAGTGTCGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MENVFIFGSSILSVISLAIVGWFTKSYFPSYMKEKGKNTATKEDIEDITKIVEWVKQRSAAELEELKSALNEQDKLLEKR
REVYEDIVESLRLFITGHPATDEQKFHFYSACSKAWLWAPDPVLLALNEFLDIQVQLAQRDGSVDQQTAKAKYEKVVLEM
RKDVGFSTTTERKYRFVTFN

Sequences:

>Translated_180_residues
MENVFIFGSSILSVISLAIVGWFTKSYFPSYMKEKGKNTATKEDIEDITKIVEWVKQRSAAELEELKSALNEQDKLLEKR
REVYEDIVESLRLFITGHPATDEQKFHFYSACSKAWLWAPDPVLLALNEFLDIQVQLAQRDGSVDQQTAKAKYEKVVLEM
RKDVGFSTTTERKYRFVTFN
>Mature_180_residues
MENVFIFGSSILSVISLAIVGWFTKSYFPSYMKEKGKNTATKEDIEDITKIVEWVKQRSAAELEELKSALNEQDKLLEKR
REVYEDIVESLRLFITGHPATDEQKFHFYSACSKAWLWAPDPVLLALNEFLDIQVQLAQRDGSVDQQTAKAKYEKVVLEM
RKDVGFSTTTERKYRFVTFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20860; Mature: 20860

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVFIFGSSILSVISLAIVGWFTKSYFPSYMKEKGKNTATKEDIEDITKIVEWVKQRSA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
AELEELKSALNEQDKLLEKRREVYEDIVESLRLFITGHPATDEQKFHFYSACSKAWLWAP
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
DPVLLALNEFLDIQVQLAQRDGSVDQQTAKAKYEKVVLEMRKDVGFSTTTERKYRFVTFN
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MENVFIFGSSILSVISLAIVGWFTKSYFPSYMKEKGKNTATKEDIEDITKIVEWVKQRSA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
AELEELKSALNEQDKLLEKRREVYEDIVESLRLFITGHPATDEQKFHFYSACSKAWLWAP
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
DPVLLALNEFLDIQVQLAQRDGSVDQQTAKAKYEKVVLEMRKDVGFSTTTERKYRFVTFN
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA