| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709853
Identifier: 218709853
GI number: 218709853
Start: 2015680
End: 2016036
Strand: Reverse
Name: 218709853
Synonym: VS_1866
Alternate gene names: NA
Gene position: 2016036-2015680 (Counterclockwise)
Preceding gene: 218709854
Following gene: 218709850
Centisome position: 61.1
GC content: 40.34
Gene sequence:
>357_bases ATGGATGTTATTTCAATAATCATTGTCGTTTTATGCGCAACATTTGTGTTTCCTGCCTTGTTTGGTTTGTTCGAATTGAA AACTTCAAAGCTCAAAGCAATCATCGAGGTTGAGGGTAATCAAATAACGATCCGCAAGCTGGCTGTGGAACGATTCCTTA GCTTAAAAGGCAGCACGATATGTACTACTAGCATTGTCCGTATTCAGTTTGTGAAAGACCCGATTGGAGGGACGTGCGTA ACTCTGTTTAATGAATCCGATGGAGCTTTGGACTTTTGGGTTCCAGAGCACTTAATTAAAGGTGTTAAAAGTGAACTTGT GAGTGCTTGCCCGTATGCACAATTCGTTGAAATTTAA
Upstream 100 bases:
>100_bases CTAAACCCGACACTCAACGCTTGGCATTTTCGCTTCGCAAAAGTATATGCCAAGGTTTCGTGCGGGTTAGCGTGGCGTTA GCTTAAAGGGACGTGAAGCT
Downstream 100 bases:
>100_bases GCTAACTAATAAGGATTGAGGTGTTGCGTAGCCAACACTAAATCCCAAGTGTTGAATAAGCCCGAAGCCACTTTATTAAG TAAATTGCGTAATTTAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MDVISIIIVVLCATFVFPALFGLFELKTSKLKAIIEVEGNQITIRKLAVERFLSLKGSTICTTSIVRIQFVKDPIGGTCV TLFNESDGALDFWVPEHLIKGVKSELVSACPYAQFVEI
Sequences:
>Translated_118_residues MDVISIIIVVLCATFVFPALFGLFELKTSKLKAIIEVEGNQITIRKLAVERFLSLKGSTICTTSIVRIQFVKDPIGGTCV TLFNESDGALDFWVPEHLIKGVKSELVSACPYAQFVEI >Mature_118_residues MDVISIIIVVLCATFVFPALFGLFELKTSKLKAIIEVEGNQITIRKLAVERFLSLKGSTICTTSIVRIQFVKDPIGGTCV TLFNESDGALDFWVPEHLIKGVKSELVSACPYAQFVEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12995; Mature: 12995
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVISIIIVVLCATFVFPALFGLFELKTSKLKAIIEVEGNQITIRKLAVERFLSLKGSTI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEHHHHHHHHHHHCCCCEE CTTSIVRIQFVKDPIGGTCVTLFNESDGALDFWVPEHLIKGVKSELVSACPYAQFVEI EHHHHEEEEEECCCCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure MDVISIIIVVLCATFVFPALFGLFELKTSKLKAIIEVEGNQITIRKLAVERFLSLKGSTI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEHHHHHHHHHHHCCCCEE CTTSIVRIQFVKDPIGGTCVTLFNESDGALDFWVPEHLIKGVKSELVSACPYAQFVEI EHHHHEEEEEECCCCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA