| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709798
Identifier: 218709798
GI number: 218709798
Start: 1943100
End: 1944476
Strand: Direct
Name: 218709798
Synonym: VS_1810
Alternate gene names: NA
Gene position: 1943100-1944476 (Clockwise)
Preceding gene: 218709797
Following gene: 218709803
Centisome position: 58.89
GC content: 41.54
Gene sequence:
>1377_bases ATGAAAACAAGCATTTTATCTGCAGCTCTACTAATCACTTTAACCGGATGTGGCGGAGGAGGCTCATCGACTCCCGCGAA AAAACCAACAGTTAAGCCAACGCAAAAGCCAGTGGTATTTATCTCTAAATGTTCGCAACCCTTACAAGGGGATACAGCCT TAACCTTCAAGATTAAGGGTACAATAGCGAGTGTCAATGGCGTTGCATGTAGTGGTAGCCCCAAAGCATTTGACGATATG ATCAAAGCTCACCCGAATACAAAAACGCTGAACTTCATCGATATGGGTGGCTCTATGAATGATGATGCCAACATTCAACT AGCGTACAAAGTAAGAGCGAAAAAATTAGACACGTACATTAGCTCTATTGGACATGTCGCTTCGGGGGGAACTGACCTTT TCGCTGCGGGTGTGAAAAGAACGATTGAACCAGGTGCTCGATTAGGCGTTCACTCATGGGCACAAGGGTCTTTACAAGGG GCTTCATTGCCTGTTGGTCATAGTGAGCATAAACCCTACATTGATTATTATAAAAAGATGGGATTACCAGATCCGAGCGG CTTCTACTGGTTTACACTGAAAGCTGCTCCGGCTCAAGGAATGCATTATATGACTCCTGCTGAAGTATCTAAGTATGGTT TGGCGTCTGTAATGACGGGTGTTACAAAAGACCTACGAGCAAATTACACTCCTAAAAACAGCCTTTTGAACAACAACCTG TTAGACGTTGTTAGTGATAGTCTGAAAGCTGTAGCCGTTGAAAACCACGTAAGAAGCAGTGTCTATGTGCTCGACCATGT CTCCACACTTCTATTTAAGCATTTCAATGTATCAAATAGAGACGAGTTAATCACTTACATAAAGCTCAATGGGAAACTCG ACCCCGTAACGAAATCTTACGTCTTCGCAGCCACGTCAGACAAACCTGCGACGATCTATAACTCAAACAAAGATGTAATT CATTCATCTTACAGCTCCAATAGTAAGTATAAGATCCAAGCTAAACCTTTAATTGAAACTGGCTTGACGATACAAGACTA TGGCGTCGAAGACACAACAACAAGTGTTCAAGTCGTATTAAATAGAAGTGATGTCAAAGTTACCGTAGGAAGTGAAGAGT TTTCTCTAACCAAAGCCTCTTCAACAAATAAAATAAACCATTGCAAAATGGATAGTGCAGCGAATTCATCAGGTCACTTA GTAACGATTGCAAACTGTACAGAAAGCCGCCTTCAAGGTGACTTGGTACAATTGGTGAATTACAAGCGAACGACAAAAAC ACCCTTAATTGGTGGAACTCCCTCAGTAAAGAACTCCATTACTAAGACTTCGAACTTTGAATTCAATGCTAAACAAAGTA CGCTAATTACTAAGTAA
Upstream 100 bases:
>100_bases TTATGTAATGAACACCTGACAAAGTCATACAGTATTGATGTCCTGTATAAATTATTCTTCTTACTAACTAATTTGTGAAT ATAAATTTTTAGGGACCCCA
Downstream 100 bases:
>100_bases TTTTACACATTGCAAAAAGAAGCCCTACTTAACACAGTAGGGCTTCATCTTTATTTCTTCTGCTTAAGTTTCATTTAAGC TGTCCAGACTAAATTAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MKTSILSAALLITLTGCGGGGSSTPAKKPTVKPTQKPVVFISKCSQPLQGDTALTFKIKGTIASVNGVACSGSPKAFDDM IKAHPNTKTLNFIDMGGSMNDDANIQLAYKVRAKKLDTYISSIGHVASGGTDLFAAGVKRTIEPGARLGVHSWAQGSLQG ASLPVGHSEHKPYIDYYKKMGLPDPSGFYWFTLKAAPAQGMHYMTPAEVSKYGLASVMTGVTKDLRANYTPKNSLLNNNL LDVVSDSLKAVAVENHVRSSVYVLDHVSTLLFKHFNVSNRDELITYIKLNGKLDPVTKSYVFAATSDKPATIYNSNKDVI HSSYSSNSKYKIQAKPLIETGLTIQDYGVEDTTTSVQVVLNRSDVKVTVGSEEFSLTKASSTNKINHCKMDSAANSSGHL VTIANCTESRLQGDLVQLVNYKRTTKTPLIGGTPSVKNSITKTSNFEFNAKQSTLITK
Sequences:
>Translated_458_residues MKTSILSAALLITLTGCGGGGSSTPAKKPTVKPTQKPVVFISKCSQPLQGDTALTFKIKGTIASVNGVACSGSPKAFDDM IKAHPNTKTLNFIDMGGSMNDDANIQLAYKVRAKKLDTYISSIGHVASGGTDLFAAGVKRTIEPGARLGVHSWAQGSLQG ASLPVGHSEHKPYIDYYKKMGLPDPSGFYWFTLKAAPAQGMHYMTPAEVSKYGLASVMTGVTKDLRANYTPKNSLLNNNL LDVVSDSLKAVAVENHVRSSVYVLDHVSTLLFKHFNVSNRDELITYIKLNGKLDPVTKSYVFAATSDKPATIYNSNKDVI HSSYSSNSKYKIQAKPLIETGLTIQDYGVEDTTTSVQVVLNRSDVKVTVGSEEFSLTKASSTNKINHCKMDSAANSSGHL VTIANCTESRLQGDLVQLVNYKRTTKTPLIGGTPSVKNSITKTSNFEFNAKQSTLITK >Mature_458_residues MKTSILSAALLITLTGCGGGGSSTPAKKPTVKPTQKPVVFISKCSQPLQGDTALTFKIKGTIASVNGVACSGSPKAFDDM IKAHPNTKTLNFIDMGGSMNDDANIQLAYKVRAKKLDTYISSIGHVASGGTDLFAAGVKRTIEPGARLGVHSWAQGSLQG ASLPVGHSEHKPYIDYYKKMGLPDPSGFYWFTLKAAPAQGMHYMTPAEVSKYGLASVMTGVTKDLRANYTPKNSLLNNNL LDVVSDSLKAVAVENHVRSSVYVLDHVSTLLFKHFNVSNRDELITYIKLNGKLDPVTKSYVFAATSDKPATIYNSNKDVI HSSYSSNSKYKIQAKPLIETGLTIQDYGVEDTTTSVQVVLNRSDVKVTVGSEEFSLTKASSTNKINHCKMDSAANSSGHL VTIANCTESRLQGDLVQLVNYKRTTKTPLIGGTPSVKNSITKTSNFEFNAKQSTLITK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49249; Mature: 49249
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSILSAALLITLTGCGGGGSSTPAKKPTVKPTQKPVVFISKCSQPLQGDTALTFKIKG CCCHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEE TIASVNGVACSGSPKAFDDMIKAHPNTKTLNFIDMGGSMNDDANIQLAYKVRAKKLDTYI EEEEECCEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHH SSIGHVASGGTDLFAAGVKRTIEPGARLGVHSWAQGSLQGASLPVGHSEHKPYIDYYKKM HHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC GLPDPSGFYWFTLKAAPAQGMHYMTPAEVSKYGLASVMTGVTKDLRANYTPKNSLLNNNL CCCCCCCEEEEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCH LDVVSDSLKAVAVENHVRSSVYVLDHVSTLLFKHFNVSNRDELITYIKLNGKLDPVTKSY HHHHHHHHHEEHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEEECCEECCCCCEE VFAATSDKPATIYNSNKDVIHSSYSSNSKYKIQAKPLIETGLTIQDYGVEDTTTSVQVVL EEEECCCCCEEEECCCCCEEEECCCCCCEEEEEECCHHHCCCEEEECCCCCCCCEEEEEE NRSDVKVTVGSEEFSLTKASSTNKINHCKMDSAANSSGHLVTIANCTESRLQGDLVQLVN ECCCEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHC YKRTTKTPLIGGTPSVKNSITKTSNFEFNAKQSTLITK CCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCEECCC >Mature Secondary Structure MKTSILSAALLITLTGCGGGGSSTPAKKPTVKPTQKPVVFISKCSQPLQGDTALTFKIKG CCCHHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEE TIASVNGVACSGSPKAFDDMIKAHPNTKTLNFIDMGGSMNDDANIQLAYKVRAKKLDTYI EEEEECCEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHH SSIGHVASGGTDLFAAGVKRTIEPGARLGVHSWAQGSLQGASLPVGHSEHKPYIDYYKKM HHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC GLPDPSGFYWFTLKAAPAQGMHYMTPAEVSKYGLASVMTGVTKDLRANYTPKNSLLNNNL CCCCCCCEEEEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCH LDVVSDSLKAVAVENHVRSSVYVLDHVSTLLFKHFNVSNRDELITYIKLNGKLDPVTKSY HHHHHHHHHEEHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEEECCEECCCCCEE VFAATSDKPATIYNSNKDVIHSSYSSNSKYKIQAKPLIETGLTIQDYGVEDTTTSVQVVL EEEECCCCCEEEECCCCCEEEECCCCCCEEEEEECCHHHCCCEEEECCCCCCCCEEEEEE NRSDVKVTVGSEEFSLTKASSTNKINHCKMDSAANSSGHLVTIANCTESRLQGDLVQLVN ECCCEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHC YKRTTKTPLIGGTPSVKNSITKTSNFEFNAKQSTLITK CCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA