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The map label for this gene is ycjF [C]

Identifier: 218709782

GI number: 218709782

Start: 1921419

End: 1922546

Strand: Reverse

Name: ycjF [C]

Synonym: VS_1794

Alternate gene names: 218709782

Gene position: 1922546-1921419 (Counterclockwise)

Preceding gene: 218709783

Following gene: 218709781

Centisome position: 58.27

GC content: 47.43

Gene sequence:

>1128_bases
TTGTCAGCATCTGAGAGTCGACAAGGTTTTAGAGTATCTCATTGGCGACAAGTTGAAGTAATTGAGGTAATCAAAATGAG
TGAATTAAAAACAAAGCAGGTCTTTGATGAACCGTTGAAGACCTCTTTTGATGAGCAAGACAAGAGCGAAGTTGGCCCGG
ATTTAGGCGCTCAACAACTGTTCACAGAGCAAGAGAAATTTGTCCCTGTCGCACCGCAAGTGGAAGCCGAACTTGATGGT
GAAGCTGAGCAGCAATTGGAACAAGTGATTCGACCGAGTAAAAAGAAGAAGTGGTTTGGAACGGGTTTATTGGTCGCTTT
CTCTGGTCTAGTTGGATGGCAGGCAATTGATTCGGTGATTACCGCGATTCAAACGGCTGACTGGCTTGCGTTAGGTTGGA
CTGGCTTTATTGCTGCCATTGCTTCATTGGGTTTAGGCGCAATAGGCAAAGAGCTGTGGAAACTGCGCTCACTTAAAGAT
CACTTTAGTGTGCAAGAGCAGAGTGAAGAACTACTCCAAAGCCAAAGTGTCGGTAAGGGCAAAGCGTTCTGTGAAAACAT
TGCCAAGCAGGCCGGTATTATCGCTGAATCACCCGCTTATGATAAGTGGCGAAACAGCATTAACCCAGCGCACAGCGATG
CTGAAGTGTTGGATATGTACGATGCGTTGGTCGTGAGTCAGCAAGATAAGGTAGCTACTCAGATCGTCACTAAGTTCTCT
ACCGAATCCGCGGCTTTGGTTGCTGTGAGCCCATTGGCGGCAGCAGATATGTTGCTGGTGGCTTGGCGAAATTTCACTAT
GATAGACAAGCTTGCTGATGTGTATGGCATTGAACTGGGCTACTGGTCTCGAATTAAATTGTTCAAGTTGGTCTTAATCA
ACATGGCAGCGGCCGGTGCAAGTGAGCTGGCGATTGATGCGAGCATGGACTTAGTCTCGATGGATCTTGCAGGTAAAGTC
TCAGCTCGAGCAGGGCAGGGGCTCGGTGTCGGTATCCTCACTGCGAGACTGGGCTTAAAAGCCATGACATTGCTGCGTCC
TATGCCTTGGCATAGTGAGCGAAAAGTAAAACTATCCGACCTTCGCAAAGCCGTCCTTTCTGAAATAAAGCGCATTACCT
TAAAGTAA

Upstream 100 bases:

>100_bases
CGGGAGAGGTGCCGCGTAAACTGCCAAACAAACAGTATTGGGAAACCAACCAGTTTGATTTTACGAGCTTTAGGCCGATG
GAGCAGCACTCTGACGAGCC

Downstream 100 bases:

>100_bases
AGCGAAGTGCTTAAAATTGAAATGTAGGAAATAAAGCGAATTACCTTCCTATAAAGTCTATATACACAAGGAAGTGAGTG
ATTTGCGAGCGAAGAGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSASESRQGFRVSHWRQVEVIEVIKMSELKTKQVFDEPLKTSFDEQDKSEVGPDLGAQQLFTEQEKFVPVAPQVEAELDG
EAEQQLEQVIRPSKKKKWFGTGLLVAFSGLVGWQAIDSVITAIQTADWLALGWTGFIAAIASLGLGAIGKELWKLRSLKD
HFSVQEQSEELLQSQSVGKGKAFCENIAKQAGIIAESPAYDKWRNSINPAHSDAEVLDMYDALVVSQQDKVATQIVTKFS
TESAALVAVSPLAAADMLLVAWRNFTMIDKLADVYGIELGYWSRIKLFKLVLINMAAAGASELAIDASMDLVSMDLAGKV
SARAGQGLGVGILTARLGLKAMTLLRPMPWHSERKVKLSDLRKAVLSEIKRITLK

Sequences:

>Translated_375_residues
MSASESRQGFRVSHWRQVEVIEVIKMSELKTKQVFDEPLKTSFDEQDKSEVGPDLGAQQLFTEQEKFVPVAPQVEAELDG
EAEQQLEQVIRPSKKKKWFGTGLLVAFSGLVGWQAIDSVITAIQTADWLALGWTGFIAAIASLGLGAIGKELWKLRSLKD
HFSVQEQSEELLQSQSVGKGKAFCENIAKQAGIIAESPAYDKWRNSINPAHSDAEVLDMYDALVVSQQDKVATQIVTKFS
TESAALVAVSPLAAADMLLVAWRNFTMIDKLADVYGIELGYWSRIKLFKLVLINMAAAGASELAIDASMDLVSMDLAGKV
SARAGQGLGVGILTARLGLKAMTLLRPMPWHSERKVKLSDLRKAVLSEIKRITLK
>Mature_374_residues
SASESRQGFRVSHWRQVEVIEVIKMSELKTKQVFDEPLKTSFDEQDKSEVGPDLGAQQLFTEQEKFVPVAPQVEAELDGE
AEQQLEQVIRPSKKKKWFGTGLLVAFSGLVGWQAIDSVITAIQTADWLALGWTGFIAAIASLGLGAIGKELWKLRSLKDH
FSVQEQSEELLQSQSVGKGKAFCENIAKQAGIIAESPAYDKWRNSINPAHSDAEVLDMYDALVVSQQDKVATQIVTKFST
ESAALVAVSPLAAADMLLVAWRNFTMIDKLADVYGIELGYWSRIKLFKLVLINMAAAGASELAIDASMDLVSMDLAGKVS
ARAGQGLGVGILTARLGLKAMTLLRPMPWHSERKVKLSDLRKAVLSEIKRITLK

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=340, Percent_Identity=41.1764705882353, Blast_Score=252, Evalue=3e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 41147; Mature: 41016

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASESRQGFRVSHWRQVEVIEVIKMSELKTKQVFDEPLKTSFDEQDKSEVGPDLGAQQL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHH
FTEQEKFVPVAPQVEAELDGEAEQQLEQVIRPSKKKKWFGTGLLVAFSGLVGWQAIDSVI
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TAIQTADWLALGWTGFIAAIASLGLGAIGKELWKLRSLKDHFSVQEQSEELLQSQSVGKG
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KAFCENIAKQAGIIAESPAYDKWRNSINPAHSDAEVLDMYDALVVSQQDKVATQIVTKFS
HHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHC
TESAALVAVSPLAAADMLLVAWRNFTMIDKLADVYGIELGYWSRIKLFKLVLINMAAAGA
CCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
SELAIDASMDLVSMDLAGKVSARAGQGLGVGILTARLGLKAMTLLRPMPWHSERKVKLSD
CHHEEECCCCHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
LRKAVLSEIKRITLK
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SASESRQGFRVSHWRQVEVIEVIKMSELKTKQVFDEPLKTSFDEQDKSEVGPDLGAQQL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHH
FTEQEKFVPVAPQVEAELDGEAEQQLEQVIRPSKKKKWFGTGLLVAFSGLVGWQAIDSVI
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TAIQTADWLALGWTGFIAAIASLGLGAIGKELWKLRSLKDHFSVQEQSEELLQSQSVGKG
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KAFCENIAKQAGIIAESPAYDKWRNSINPAHSDAEVLDMYDALVVSQQDKVATQIVTKFS
HHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHC
TESAALVAVSPLAAADMLLVAWRNFTMIDKLADVYGIELGYWSRIKLFKLVLINMAAAGA
CCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
SELAIDASMDLVSMDLAGKVSARAGQGLGVGILTARLGLKAMTLLRPMPWHSERKVKLSD
CHHEEECCCCHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
LRKAVLSEIKRITLK
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]