Click here to switch to the map view.

The map label for this gene is rimJ [H]

Identifier: 218709780

GI number: 218709780

Start: 1919029

End: 1919616

Strand: Reverse

Name: rimJ [H]

Synonym: VS_1792

Alternate gene names: 218709780

Gene position: 1919616-1919029 (Counterclockwise)

Preceding gene: 218709781

Following gene: 218709779

Centisome position: 58.18

GC content: 45.58

Gene sequence:

>588_bases
ATGGAAGATTCGAGTACGCAGCAACGTATTGATAAACGTGATGGCAACCTAATTTTACGAACGGCTGAGATCTATGATGC
GAGCATGATCAGTGAGTACTTTCAGGTGAACAGAGAGTACCTTAAGCCTTGGGAACCGACCCGAGAGGATGCGTTCTTTG
ACAGAGCGGATTGGGCTCAACGGCTGATTAAGTTAAACGAACTCCATAAATTGGGGCTAGGCTATTATTGCTTGTTGATT
AATGCCGATTCAAATGAAATGTTAGGTACCATATCGTTCAGTAATTTGTCTCGTTTCCCGTTCTACGCTTGTAATGTCGG
TTATTCATTGGCGCAAAGTGCACAGGGCCACGGTTACATGCGCAGAGGCTTGAGCATGGCTAAAGACTACATGTTTGATG
TGCAGAACATGCACCGCTTAATGGCGGGCTACATGCCTCACAACGAACGAAGTGCGGGTGTATTAGAGCATCTTGGTTTT
GTTCGAGAAGGTTTTGCCAAAGATTACCTACAGATTAACGGTAAATGGGAAGATCACGTGTTGACGGCACTGGTAAACCC
AAACTGGCAAGATAAACGCTCCGTGTGA

Upstream 100 bases:

>100_bases
TTCGTGATTACGGTATCAGAAAGAGTTGATGATATTAGACTGCTAAATTCGGTAAGAGTGAGGCGGTAACGTAAAAAGAG
ACAAAAATAAGAACAAGACT

Downstream 100 bases:

>100_bases
GTGTAAAACATTGAATTTAGATACAGCGGAGAACATAAATAAAATGAAGTCATCGCTGTATCGAAAGAACATATAGGCAT
GGTAAGCCCATAAGCCTGAG

Product: ribosomal-protein-alanine acetyltransferase

Products: NA

Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S5 [H]

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MEDSSTQQRIDKRDGNLILRTAEIYDASMISEYFQVNREYLKPWEPTREDAFFDRADWAQRLIKLNELHKLGLGYYCLLI
NADSNEMLGTISFSNLSRFPFYACNVGYSLAQSAQGHGYMRRGLSMAKDYMFDVQNMHRLMAGYMPHNERSAGVLEHLGF
VREGFAKDYLQINGKWEDHVLTALVNPNWQDKRSV

Sequences:

>Translated_195_residues
MEDSSTQQRIDKRDGNLILRTAEIYDASMISEYFQVNREYLKPWEPTREDAFFDRADWAQRLIKLNELHKLGLGYYCLLI
NADSNEMLGTISFSNLSRFPFYACNVGYSLAQSAQGHGYMRRGLSMAKDYMFDVQNMHRLMAGYMPHNERSAGVLEHLGF
VREGFAKDYLQINGKWEDHVLTALVNPNWQDKRSV
>Mature_195_residues
MEDSSTQQRIDKRDGNLILRTAEIYDASMISEYFQVNREYLKPWEPTREDAFFDRADWAQRLIKLNELHKLGLGYYCLLI
NADSNEMLGTISFSNLSRFPFYACNVGYSLAQSAQGHGYMRRGLSMAKDYMFDVQNMHRLMAGYMPHNERSAGVLEHLGF
VREGFAKDYLQINGKWEDHVLTALVNPNWQDKRSV

Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5. Plays also a role in the temperature regulation of pap pilin transcription [H]

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1787305, Length=177, Percent_Identity=46.3276836158192, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: =2.3.1.128 [H]

Molecular weight: Translated: 22694; Mature: 22694

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDSSTQQRIDKRDGNLILRTAEIYDASMISEYFQVNREYLKPWEPTREDAFFDRADWAQ
CCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHCCHHHHHH
RLIKLNELHKLGLGYYCLLINADSNEMLGTISFSNLSRFPFYACNVGYSLAQSAQGHGYM
HHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEECCCHHHHHCCCCCHHH
RRGLSMAKDYMFDVQNMHRLMAGYMPHNERSAGVLEHLGFVREGFAKDYLQINGKWEDHV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCE
LTALVNPNWQDKRSV
EEEEECCCCCCCCCC
>Mature Secondary Structure
MEDSSTQQRIDKRDGNLILRTAEIYDASMISEYFQVNREYLKPWEPTREDAFFDRADWAQ
CCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHCCHHHHHH
RLIKLNELHKLGLGYYCLLINADSNEMLGTISFSNLSRFPFYACNVGYSLAQSAQGHGYM
HHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEECCCHHHHHCCCCCHHH
RRGLSMAKDYMFDVQNMHRLMAGYMPHNERSAGVLEHLGFVREGFAKDYLQINGKWEDHV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCE
LTALVNPNWQDKRSV
EEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]