| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is dnaK [H]
Identifier: 218709776
GI number: 218709776
Start: 1914933
End: 1917407
Strand: Direct
Name: dnaK [H]
Synonym: VS_1788
Alternate gene names: 218709776
Gene position: 1914933-1917407 (Clockwise)
Preceding gene: 218709775
Following gene: 218709777
Centisome position: 58.04
GC content: 48.85
Gene sequence:
>2475_bases ATGGCATCTCCTCGTTTTTTAGTCGGCATTGACTTAGGCACAACCAATACTGTTGTCGCTTACTGTGAAATCAACGACGA CCTACAACATGCTCCCGTTTCTCTTTTCGATATTGACCAACTCATCGGCCCCGGTGAAGTGGTTCGCAAGCCTCTACTTC CATCATTTCGTTATCATCCCGCACAAGGTCAGATCTCCCCTTCCGATCTCACCATGCCTTGGGAACCGAGCTTAGTTGAA GGCGATATTCAAAATGTCATCGTTGGTGAATGGGCTCGCGAACTGGGCGCAAAAGTCGAAGGCCGCCAAGTATCCAGTGC TAAGAGCTGGTTATCTCACCAAGCGGTTGATCGTAACTCCGACATTCTGCCTTGGGCAGGCGCAACTGACGTCGATAAGG TGTCTCCTGTTGTCGCAAGCGCAAGCTACCTTAACCACCTCCGTCAAGCATGGAACTACCGTAACCCAAGCAATAAGCTT GAAGACCAAGACGTTGTAGTCACCGTTCCTGCTTCATTCGATGAGACAGCACGTAAGCTGACACTCGAAGCGGCAGCACT TGCTGGTTTAGGTAAGATTCTATTGCTCGAAGAGCCGCAAGCCGTTTGTTATGACTGGTATGCCCGTCACCAACAAACCG CTACAGACGAACTTCAACAGATCCCGCTGATTCTAGTGTGTGATGTTGGCGGCGGTACTACCGATTTAAGTTTGATCGAA GCGAGCTTCAAATCGGATAACGGTGGCAATCAAGAGCTCGCACTCGACCGTATCGGCGTTGGCGAACACTTGATGCTCGG GGGTGATAACCTCGACTTAGCGCTTGCCCACCTTGCAGAGCAGCGCTTCAATCAAAACAAAAAATTGAATGCTTCGAGCC TAACCAAGCTTATTCAGCAGACTCGCGCCGCAAAAGAGAGCCTGCTTTCTGCTAATGCGCCGGACGATGTGAAGATCACC ATGCTGGGCAGCGGTTCAAAACTGCTTGGCGGAACGAAGAGTATTGGTTTAACCAAACAAGAAGTTCATCAGATTGCACT AGAAGGTTTCTTCCCGCTTTCAGAGTTTACGGAAGTACCCGACAAACGACGTAGCGCGGTTGTAGAGTTCGGTCTACCCT ACGCAGCAGATCCTGCTGTAAGTAAGCACGTTGCCGAATTCCTAGCGACCCACCAACAAGTATCTAAAGCCGCATTGGAA AAGTCAGACTCTGTTGAGTTTGATGATACCAAACCTGCAATTCCTGTTGGTGTGCTACTCAATGGTGGTGTGTTCAACAG TGAACTGGTAACAGAGCGAATTACTCAGTTACTTGGCAATTGGAACGGTGCACCAATCACCGTCTTAGATAACCCTCACC CTGACTGGTCTGTAGCCCTTGGTGCTGTAGCTTTTGGTAAAGCACGCCGTGGTGCACAACTGAAAATCGGTGGCGGTGCC GCTCGTTCTTACTTCTTGCATCTACAAGAGAAGAACAAGATGGGCAAAGCGCTTTGTCTGCTTGCCAAAGGTACTGAAGA AGGCCAAGAGATACGCTTAAACAGCCGTCGTTTCTCGCTGACTTTAGGTGAGCCAGTACGATTTAATCTACTGACTTCAA CCCACGATCAAATTGCTCATGACACCGCTATTCAAAATGGTGTGATGGTCAATGTCGACGCTGACTTGTTCTCCCCTCTT CCACCGTATATTTCTACGTTGGAAGGCTCAGGTACCGCAGAACTTCAAGCCAACCAAAAAGAGCGTGTTGAAGTGTTGCT TGCTTGTCAGTTAACCGAAGTCGGCACATTGAAAATGGAGTGTGTGAGTACAGAAGATGACTCTAAACGTTGGTTGCTCG AGTTTGAAGTCAGAAACAAGCAAGGCGATGAGTCCGATAACTCTAAACTTCATCCAAGACTGGACGAATGTAAGGAGTTG ATTTCTCGCCTGTACAGCGGCAACAAGAAAAGTGCGGAATCTAAAGAGATCAAAACGCTGGCCAAAGATCTTGAGAAACG ACTTGGTAAGCGCGAAGAGTGGGACTTTACTACTCTCCGTCACCTGTTTGATTCGTTCTCATTAGGTCGTAAACGACGTC GTCGCTCTGAAGCACACGAGAAAAACTGGCTCCGTTTGGCGGGTTACTCGCTGCGTCCAGGCTTTGGTGATCCGACTGAC TCATGGCGTATCGAACAAATTTGGGGCCTCTACCAACAAAATATCCAATTCCAGAACCACCAAGGTTGGACGGACTGGTG GGTATTCTGGCGTCGTGTTGCGGGTGGCCTGAATCAAGAACAGCAAGAAACCATCTTGGCTGATATCGCGAAATACCTTC ACCCAGGTGCAATGAAGAACCCTAAAACGGCTAAAGATGCACAAGACAATGGCTATGAAGCCATGGTTCGTTTAGCGGCA TCACTTGAGCAACTTGAAGTGGAAGACAAAGTGCTGCTGGCTGCTGGCAAGCTGGTTCTTGAGCAAAGCGATTAA
Upstream 100 bases:
>100_bases AATGCGATTCCCTAGCCCTGTATTAAAAGCATTCCAAAGACAATAATAAGACCAAAATTATCCATTAACTGGTCATCACT TTGGCAGAATAAGGTTTTGT
Downstream 100 bases:
>100_bases CCATAACCAATTTGAACAAGCTCACTGGTGGGCTCTGGGTCGCTTAGCGTCTCGCACACCGTTATACGGAAGCCAACACA GTGTCATTCCAAGAGAGCAA
Product: putative chaperone protein DnaK
Products: NA
Alternate protein names: HSP70; Heat shock 70 kDa protein; Heat shock protein 70 [H]
Number of amino acids: Translated: 824; Mature: 823
Protein sequence:
>824_residues MASPRFLVGIDLGTTNTVVAYCEINDDLQHAPVSLFDIDQLIGPGEVVRKPLLPSFRYHPAQGQISPSDLTMPWEPSLVE GDIQNVIVGEWARELGAKVEGRQVSSAKSWLSHQAVDRNSDILPWAGATDVDKVSPVVASASYLNHLRQAWNYRNPSNKL EDQDVVVTVPASFDETARKLTLEAAALAGLGKILLLEEPQAVCYDWYARHQQTATDELQQIPLILVCDVGGGTTDLSLIE ASFKSDNGGNQELALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQNKKLNASSLTKLIQQTRAAKESLLSANAPDDVKIT MLGSGSKLLGGTKSIGLTKQEVHQIALEGFFPLSEFTEVPDKRRSAVVEFGLPYAADPAVSKHVAEFLATHQQVSKAALE KSDSVEFDDTKPAIPVGVLLNGGVFNSELVTERITQLLGNWNGAPITVLDNPHPDWSVALGAVAFGKARRGAQLKIGGGA ARSYFLHLQEKNKMGKALCLLAKGTEEGQEIRLNSRRFSLTLGEPVRFNLLTSTHDQIAHDTAIQNGVMVNVDADLFSPL PPYISTLEGSGTAELQANQKERVEVLLACQLTEVGTLKMECVSTEDDSKRWLLEFEVRNKQGDESDNSKLHPRLDECKEL ISRLYSGNKKSAESKEIKTLAKDLEKRLGKREEWDFTTLRHLFDSFSLGRKRRRRSEAHEKNWLRLAGYSLRPGFGDPTD SWRIEQIWGLYQQNIQFQNHQGWTDWWVFWRRVAGGLNQEQQETILADIAKYLHPGAMKNPKTAKDAQDNGYEAMVRLAA SLEQLEVEDKVLLAAGKLVLEQSD
Sequences:
>Translated_824_residues MASPRFLVGIDLGTTNTVVAYCEINDDLQHAPVSLFDIDQLIGPGEVVRKPLLPSFRYHPAQGQISPSDLTMPWEPSLVE GDIQNVIVGEWARELGAKVEGRQVSSAKSWLSHQAVDRNSDILPWAGATDVDKVSPVVASASYLNHLRQAWNYRNPSNKL EDQDVVVTVPASFDETARKLTLEAAALAGLGKILLLEEPQAVCYDWYARHQQTATDELQQIPLILVCDVGGGTTDLSLIE ASFKSDNGGNQELALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQNKKLNASSLTKLIQQTRAAKESLLSANAPDDVKIT MLGSGSKLLGGTKSIGLTKQEVHQIALEGFFPLSEFTEVPDKRRSAVVEFGLPYAADPAVSKHVAEFLATHQQVSKAALE KSDSVEFDDTKPAIPVGVLLNGGVFNSELVTERITQLLGNWNGAPITVLDNPHPDWSVALGAVAFGKARRGAQLKIGGGA ARSYFLHLQEKNKMGKALCLLAKGTEEGQEIRLNSRRFSLTLGEPVRFNLLTSTHDQIAHDTAIQNGVMVNVDADLFSPL PPYISTLEGSGTAELQANQKERVEVLLACQLTEVGTLKMECVSTEDDSKRWLLEFEVRNKQGDESDNSKLHPRLDECKEL ISRLYSGNKKSAESKEIKTLAKDLEKRLGKREEWDFTTLRHLFDSFSLGRKRRRRSEAHEKNWLRLAGYSLRPGFGDPTD SWRIEQIWGLYQQNIQFQNHQGWTDWWVFWRRVAGGLNQEQQETILADIAKYLHPGAMKNPKTAKDAQDNGYEAMVRLAA SLEQLEVEDKVLLAAGKLVLEQSD >Mature_823_residues ASPRFLVGIDLGTTNTVVAYCEINDDLQHAPVSLFDIDQLIGPGEVVRKPLLPSFRYHPAQGQISPSDLTMPWEPSLVEG DIQNVIVGEWARELGAKVEGRQVSSAKSWLSHQAVDRNSDILPWAGATDVDKVSPVVASASYLNHLRQAWNYRNPSNKLE DQDVVVTVPASFDETARKLTLEAAALAGLGKILLLEEPQAVCYDWYARHQQTATDELQQIPLILVCDVGGGTTDLSLIEA SFKSDNGGNQELALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQNKKLNASSLTKLIQQTRAAKESLLSANAPDDVKITM LGSGSKLLGGTKSIGLTKQEVHQIALEGFFPLSEFTEVPDKRRSAVVEFGLPYAADPAVSKHVAEFLATHQQVSKAALEK SDSVEFDDTKPAIPVGVLLNGGVFNSELVTERITQLLGNWNGAPITVLDNPHPDWSVALGAVAFGKARRGAQLKIGGGAA RSYFLHLQEKNKMGKALCLLAKGTEEGQEIRLNSRRFSLTLGEPVRFNLLTSTHDQIAHDTAIQNGVMVNVDADLFSPLP PYISTLEGSGTAELQANQKERVEVLLACQLTEVGTLKMECVSTEDDSKRWLLEFEVRNKQGDESDNSKLHPRLDECKELI SRLYSGNKKSAESKEIKTLAKDLEKRLGKREEWDFTTLRHLFDSFSLGRKRRRRSEAHEKNWLRLAGYSLRPGFGDPTDS WRIEQIWGLYQQNIQFQNHQGWTDWWVFWRRVAGGLNQEQQETILADIAKYLHPGAMKNPKTAKDAQDNGYEAMVRLAAS LEQLEVEDKVLLAAGKLVLEQSD
Specific function: Acts as a chaperone [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012725 - InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 91139; Mature: 91008
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPRFLVGIDLGTTNTVVAYCEINDDLQHAPVSLFDIDQLIGPGEVVRKPLLPSFRYHP CCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCHHEEHHHHCCCHHHHHCCCCCCCCCCC AQGQISPSDLTMPWEPSLVEGDIQNVIVGEWARELGAKVEGRQVSSAKSWLSHQAVDRNS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC DILPWAGATDVDKVSPVVASASYLNHLRQAWNYRNPSNKLEDQDVVVTVPASFDETARKL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHH TLEAAALAGLGKILLLEEPQAVCYDWYARHQQTATDELQQIPLILVCDVGGGTTDLSLIE HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHH ASFKSDNGGNQELALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQNKKLNASSLTKLIQQ HHHCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TRAAKESLLSANAPDDVKITMLGSGSKLLGGTKSIGLTKQEVHQIALEGFFPLSEFTEVP HHHHHHHHHCCCCCCCEEEEEEECCCHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCC DKRRSAVVEFGLPYAADPAVSKHVAEFLATHQQVSKAALEKSDSVEFDDTKPAIPVGVLL CHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE NGGVFNSELVTERITQLLGNWNGAPITVLDNPHPDWSVALGAVAFGKARRGAQLKIGGGA ECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCC ARSYFLHLQEKNKMGKALCLLAKGTEEGQEIRLNSRRFSLTLGEPVRFNLLTSTHDQIAH CEEEEEEEHHHCCCCCEEEEEECCCCCCCEEEECCEEEEEEECCCEEEEEEECCHHHHHH DTAIQNGVMVNVDADLFSPLPPYISTLEGSGTAELQANQKERVEVLLACQLTEVGTLKME HHHHCCCEEEEECHHHCCCCCHHHHHCCCCCCEEECCCCHHHEEEEEEEECCCCCCEEEE CVSTEDDSKRWLLEFEVRNKQGDESDNSKLHPRLDECKELISRLYSGNKKSAESKEIKTL EECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH AKDLEKRLGKREEWDFTTLRHLFDSFSLGRKRRRRSEAHEKNWLRLAGYSLRPGFGDPTD HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCCCCCCC SWRIEQIWGLYQQNIQFQNHQGWTDWWVFWRRVAGGLNQEQQETILADIAKYLHPGAMKN CCHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC PKTAKDAQDNGYEAMVRLAASLEQLEVEDKVLLAAGKLVLEQSD CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECEEEEECCC >Mature Secondary Structure ASPRFLVGIDLGTTNTVVAYCEINDDLQHAPVSLFDIDQLIGPGEVVRKPLLPSFRYHP CCCCEEEEEECCCCCEEEEEEEECCCCCCCCCHHEEHHHHCCCHHHHHCCCCCCCCCCC AQGQISPSDLTMPWEPSLVEGDIQNVIVGEWARELGAKVEGRQVSSAKSWLSHQAVDRNS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC DILPWAGATDVDKVSPVVASASYLNHLRQAWNYRNPSNKLEDQDVVVTVPASFDETARKL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHH TLEAAALAGLGKILLLEEPQAVCYDWYARHQQTATDELQQIPLILVCDVGGGTTDLSLIE HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHH ASFKSDNGGNQELALDRIGVGEHLMLGGDNLDLALAHLAEQRFNQNKKLNASSLTKLIQQ HHHCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TRAAKESLLSANAPDDVKITMLGSGSKLLGGTKSIGLTKQEVHQIALEGFFPLSEFTEVP HHHHHHHHHCCCCCCCEEEEEEECCCHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCC DKRRSAVVEFGLPYAADPAVSKHVAEFLATHQQVSKAALEKSDSVEFDDTKPAIPVGVLL CHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE NGGVFNSELVTERITQLLGNWNGAPITVLDNPHPDWSVALGAVAFGKARRGAQLKIGGGA ECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCC ARSYFLHLQEKNKMGKALCLLAKGTEEGQEIRLNSRRFSLTLGEPVRFNLLTSTHDQIAH CEEEEEEEHHHCCCCCEEEEEECCCCCCCEEEECCEEEEEEECCCEEEEEEECCHHHHHH DTAIQNGVMVNVDADLFSPLPPYISTLEGSGTAELQANQKERVEVLLACQLTEVGTLKME HHHHCCCEEEEECHHHCCCCCHHHHHCCCCCCEEECCCCHHHEEEEEEEECCCCCCEEEE CVSTEDDSKRWLLEFEVRNKQGDESDNSKLHPRLDECKELISRLYSGNKKSAESKEIKTL EECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH AKDLEKRLGKREEWDFTTLRHLFDSFSLGRKRRRRSEAHEKNWLRLAGYSLRPGFGDPTD HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCCCCCCC SWRIEQIWGLYQQNIQFQNHQGWTDWWVFWRRVAGGLNQEQQETILADIAKYLHPGAMKN CCHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC PKTAKDAQDNGYEAMVRLAASLEQLEVEDKVLLAAGKLVLEQSD CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]