Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709760

Identifier: 218709760

GI number: 218709760

Start: 1895396

End: 1896169

Strand: Direct

Name: 218709760

Synonym: VS_1772

Alternate gene names: NA

Gene position: 1895396-1896169 (Clockwise)

Preceding gene: 218709752

Following gene: 218709761

Centisome position: 57.45

GC content: 45.35

Gene sequence:

>774_bases
TTGAGCGCCAAATATTCTTATTTAGCTTGGCAAGTGAATACTTCTAGCCCAGCAGAAAAGCTTGTTTTATTGATGCTTGC
AGACGGTGCTGACGAATTCGGCTACACCAATGTGTGCTTAAAAACAGCAGGTCAACTTTGTGCTCTCTCTACGTTTGGTT
TAGCCGACTGCCTTAAGTGTTTAGTCGACCAAGGTTTTCTCGATAAGATAAAAGTAGATTATCGAGATCAAAAAGAGATT
CACGTTTTCAAAATGCTCATTGAGCAAGAGCAAGCTACGGCGCACGTTGAGGTTCAACCGACCAACAGTATTCCTGTCTA
CTCTACGGCACCTGCACCTGCACCTGCACCCAAGTTTCAGCCTGCTCCGGCACCGATGCAACACATGCAGCATGCCCCTC
GCCCACAAGGCCGAGGCTCAATGAACAGCAACACCGTATCTACTCATGATCTCAACGAAGAAGAGATACCATCATGGGCA
GAACGTGCGTTTAAATTCTCCGGTTTGACCGGTGACCATAGTTTAGTATGGAAGAAATTTGTCCTCTGGTATAAAGCCAA
AGCCAATGAATTAATGCCACTATCTCGGATTGAATCCAAGCTGCAGTACTGGCTAGTTAACGAGAAGCAAAATGAAAGAC
AACAACAGCAGAAGACCTCTCAATATTCAGGAAATGCAGGACAAGCTCAAGGAAATGGGTATCGACAAAAGCTTAGCCCA
TCTGAACGCTTCAGGCAGCAGCTCATTCAAAAAGGCAAAAAGCCAACCTTCTGA

Upstream 100 bases:

>100_bases
TATTTGGCTTACTAATGCCGTTTTCTACTAAGTTGCTATAAATTAGGTAAGGGGTGACTTACAATAGTGACAACGACTTA
CCTTTTTTGAGAACACGATA

Downstream 100 bases:

>100_bases
GCCCGCTTCACCTGTTGTTCCTGACTCTACAGGCTCAGTAGTACCTGAAGTTATTGAAGCACAGAGCACTGAAGTAGCGA
CACCCAATGCTGCCAGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSAKYSYLAWQVNTSSPAEKLVLLMLADGADEFGYTNVCLKTAGQLCALSTFGLADCLKCLVDQGFLDKIKVDYRDQKEI
HVFKMLIEQEQATAHVEVQPTNSIPVYSTAPAPAPAPKFQPAPAPMQHMQHAPRPQGRGSMNSNTVSTHDLNEEEIPSWA
ERAFKFSGLTGDHSLVWKKFVLWYKAKANELMPLSRIESKLQYWLVNEKQNERQQQQKTSQYSGNAGQAQGNGYRQKLSP
SERFRQQLIQKGKKPTF

Sequences:

>Translated_257_residues
MSAKYSYLAWQVNTSSPAEKLVLLMLADGADEFGYTNVCLKTAGQLCALSTFGLADCLKCLVDQGFLDKIKVDYRDQKEI
HVFKMLIEQEQATAHVEVQPTNSIPVYSTAPAPAPAPKFQPAPAPMQHMQHAPRPQGRGSMNSNTVSTHDLNEEEIPSWA
ERAFKFSGLTGDHSLVWKKFVLWYKAKANELMPLSRIESKLQYWLVNEKQNERQQQQKTSQYSGNAGQAQGNGYRQKLSP
SERFRQQLIQKGKKPTF
>Mature_256_residues
SAKYSYLAWQVNTSSPAEKLVLLMLADGADEFGYTNVCLKTAGQLCALSTFGLADCLKCLVDQGFLDKIKVDYRDQKEIH
VFKMLIEQEQATAHVEVQPTNSIPVYSTAPAPAPAPKFQPAPAPMQHMQHAPRPQGRGSMNSNTVSTHDLNEEEIPSWAE
RAFKFSGLTGDHSLVWKKFVLWYKAKANELMPLSRIESKLQYWLVNEKQNERQQQQKTSQYSGNAGQAQGNGYRQKLSPS
ERFRQQLIQKGKKPTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28982; Mature: 28851

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKYSYLAWQVNTSSPAEKLVLLMLADGADEFGYTNVCLKTAGQLCALSTFGLADCLKC
CCCCCEEEEEEECCCCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
LVDQGFLDKIKVDYRDQKEIHVFKMLIEQEQATAHVEVQPTNSIPVYSTAPAPAPAPKFQ
HHCCCCHHHEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCEECCCCCCCCCCCC
PAPAPMQHMQHAPRPQGRGSMNSNTVSTHDLNEEEIPSWAERAFKFSGLTGDHSLVWKKF
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHH
VLWYKAKANELMPLSRIESKLQYWLVNEKQNERQQQQKTSQYSGNAGQAQGNGYRQKLSP
HHHHHCCCCCCCCHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCH
SERFRQQLIQKGKKPTF
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAKYSYLAWQVNTSSPAEKLVLLMLADGADEFGYTNVCLKTAGQLCALSTFGLADCLKC
CCCCEEEEEEECCCCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
LVDQGFLDKIKVDYRDQKEIHVFKMLIEQEQATAHVEVQPTNSIPVYSTAPAPAPAPKFQ
HHCCCCHHHEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCEECCCCCCCCCCCC
PAPAPMQHMQHAPRPQGRGSMNSNTVSTHDLNEEEIPSWAERAFKFSGLTGDHSLVWKKF
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHH
VLWYKAKANELMPLSRIESKLQYWLVNEKQNERQQQQKTSQYSGNAGQAQGNGYRQKLSP
HHHHHCCCCCCCCHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCH
SERFRQQLIQKGKKPTF
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA