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The map label for this gene is ychK [C]

Identifier: 218709741

GI number: 218709741

Start: 1873770

End: 1874651

Strand: Reverse

Name: ychK [C]

Synonym: VS_1753

Alternate gene names: 218709741

Gene position: 1874651-1873770 (Counterclockwise)

Preceding gene: 218709742

Following gene: 218709740

Centisome position: 56.82

GC content: 46.03

Gene sequence:

>882_bases
ATGAGTACGATGGAAAAAACGATCTCGTTGGTACTTGGCAGTGGTGGCGCAAGAGGCTTGGTTCACGTTGGAATCATCCG
TTGGTTAATTGAGCATGGCTATCAGATAAAATCCATCTCTGGTTGTTCAATTGGCGCACTTATCGGTGGTGTTTACGCGG
CGGGTAAATTGGATGAATTTGAAGAGTGGGTCACCAGTATCGACCAATCGGATATGGCGATGATGTTGGATTTTTCATGG
CAGTCGAGTGGTATCTTCAAAGGGGACAAGATCATCGATACACTGCGTGGATTGATCGGTGAGATTTCAATTGAAGAACT
GCCTATCCCTTATACCGCAGTTGCCGCTAACGTCGCCGATGAAAAAGAGGTTTGGCTGCAATCAGGCTCTCTGTTTGATG
CCATTCGCGCTTCTATCTCTTTGCCATTGTTCTTCACTCCTCATGTGATTAATGGCGAAGCGCTGATTGATGGCGGGGTA
CTCAATCCCGTACCGATTGCGCCTACCTTTGGTGATAAGACAGACTTTACTCTTGCTGTGAACTTAGGCGGCGAACCTGA
AATTGTTCAACAGGAAGTGATACCGGTTTCCCTACCTACCAAAGAGAGCAATTTGCATGAGAAGGTTGTTCACTTTATCG
ATAATCTAGGTAGCAGTGTAAAAAGTAAAATGAGCTTTAACTTTGCAGCCTACGACATTGCCAACCAAGCGTTTGATGCG
ATGCAATCGACCATTGCTCGCCAAAAATTGGCCGCTTATCCCGCCGATATTACGCTTGAGATCCCACGCAATGCCTGTGG
CACCTTAGAGTTTGATCGTTCACAAGAGATGATAGATAGAGGCTACCATTTGGCACAGGCTAAATTGGGCAATCGACTTT
AA

Upstream 100 bases:

>100_bases
GGCACGCAGGTGGTGCAGTTTTCAAAGCATTACACAGCTTACACTGACACGAAGTGATATAATTTTTGCCCAAAGCTTTG
AAGAGCTAATGAATTAAAGG

Downstream 100 bases:

>100_bases
TGTATTTGCTGCTGAATGAGAGTATTTATGGAAACTGAACTAAAAGACCTTGAACTCCACGAGCTTATGGCAACAAAAGA
TGTCATCGTGCTTACCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSTMEKTISLVLGSGGARGLVHVGIIRWLIEHGYQIKSISGCSIGALIGGVYAAGKLDEFEEWVTSIDQSDMAMMLDFSW
QSSGIFKGDKIIDTLRGLIGEISIEELPIPYTAVAANVADEKEVWLQSGSLFDAIRASISLPLFFTPHVINGEALIDGGV
LNPVPIAPTFGDKTDFTLAVNLGGEPEIVQQEVIPVSLPTKESNLHEKVVHFIDNLGSSVKSKMSFNFAAYDIANQAFDA
MQSTIARQKLAAYPADITLEIPRNACGTLEFDRSQEMIDRGYHLAQAKLGNRL

Sequences:

>Translated_293_residues
MSTMEKTISLVLGSGGARGLVHVGIIRWLIEHGYQIKSISGCSIGALIGGVYAAGKLDEFEEWVTSIDQSDMAMMLDFSW
QSSGIFKGDKIIDTLRGLIGEISIEELPIPYTAVAANVADEKEVWLQSGSLFDAIRASISLPLFFTPHVINGEALIDGGV
LNPVPIAPTFGDKTDFTLAVNLGGEPEIVQQEVIPVSLPTKESNLHEKVVHFIDNLGSSVKSKMSFNFAAYDIANQAFDA
MQSTIARQKLAAYPADITLEIPRNACGTLEFDRSQEMIDRGYHLAQAKLGNRL
>Mature_292_residues
STMEKTISLVLGSGGARGLVHVGIIRWLIEHGYQIKSISGCSIGALIGGVYAAGKLDEFEEWVTSIDQSDMAMMLDFSWQ
SSGIFKGDKIIDTLRGLIGEISIEELPIPYTAVAANVADEKEVWLQSGSLFDAIRASISLPLFFTPHVINGEALIDGGVL
NPVPIAPTFGDKTDFTLAVNLGGEPEIVQQEVIPVSLPTKESNLHEKVVHFIDNLGSSVKSKMSFNFAAYDIANQAFDAM
QSTIARQKLAAYPADITLEIPRNACGTLEFDRSQEMIDRGYHLAQAKLGNRL

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=190, Percent_Identity=32.1052631578947, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI116256487, Length=190, Percent_Identity=32.1052631578947, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI260656039, Length=190, Percent_Identity=32.1052631578947, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI260656043, Length=190, Percent_Identity=32.1052631578947, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI260656037, Length=190, Percent_Identity=32.1052631578947, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI148727335, Length=192, Percent_Identity=30.7291666666667, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI148727290, Length=192, Percent_Identity=30.7291666666667, Blast_Score=84, Evalue=1e-16,
Organism=Escherichia coli, GI226510936, Length=285, Percent_Identity=32.280701754386, Blast_Score=173, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI71997299, Length=148, Percent_Identity=31.7567567567568, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71997289, Length=148, Percent_Identity=31.7567567567568, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=187, Percent_Identity=30.4812834224599, Blast_Score=90, Evalue=3e-19,
Organism=Drosophila melanogaster, GI28571388, Length=166, Percent_Identity=30.7228915662651, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281376913, Length=166, Percent_Identity=30.7228915662651, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31789; Mature: 31658

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTMEKTISLVLGSGGARGLVHVGIIRWLIEHGYQIKSISGCSIGALIGGVYAAGKLDEF
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHHH
EEWVTSIDQSDMAMMLDFSWQSSGIFKGDKIIDTLRGLIGEISIEELPIPYTAVAANVAD
HHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHCCCC
EKEVWLQSGSLFDAIRASISLPLFFTPHVINGEALIDGGVLNPVPIAPTFGDKTDFTLAV
HHHHHHHCCCHHHHHHHHHCCCEEECCEEECCCEEECCCCCCCCCCCCCCCCCCCEEEEE
NLGGEPEIVQQEVIPVSLPTKESNLHEKVVHFIDNLGSSVKSKMSFNFAAYDIANQAFDA
ECCCCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
MQSTIARQKLAAYPADITLEIPRNACGTLEFDRSQEMIDRGYHLAQAKLGNRL
HHHHHHHHHHHCCCCCEEEECCCCCCCCEEECCHHHHHHHCHHHHHHHHCCCC
>Mature Secondary Structure 
STMEKTISLVLGSGGARGLVHVGIIRWLIEHGYQIKSISGCSIGALIGGVYAAGKLDEF
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHHH
EEWVTSIDQSDMAMMLDFSWQSSGIFKGDKIIDTLRGLIGEISIEELPIPYTAVAANVAD
HHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHCCCC
EKEVWLQSGSLFDAIRASISLPLFFTPHVINGEALIDGGVLNPVPIAPTFGDKTDFTLAV
HHHHHHHCCCHHHHHHHHHCCCEEECCEEECCCEEECCCCCCCCCCCCCCCCCCCEEEEE
NLGGEPEIVQQEVIPVSLPTKESNLHEKVVHFIDNLGSSVKSKMSFNFAAYDIANQAFDA
ECCCCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
MQSTIARQKLAAYPADITLEIPRNACGTLEFDRSQEMIDRGYHLAQAKLGNRL
HHHHHHHHHHHCCCCCEEEECCCCCCCCEEECCHHHHHHHCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]