| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709740
Identifier: 218709740
GI number: 218709740
Start: 1873386
End: 1873754
Strand: Reverse
Name: 218709740
Synonym: VS_1752
Alternate gene names: NA
Gene position: 1873754-1873386 (Counterclockwise)
Preceding gene: 218709741
Following gene: 218709735
Centisome position: 56.79
GC content: 42.82
Gene sequence:
>369_bases ATGAGAGTATTTATGGAAACTGAACTAAAAGACCTTGAACTCCACGAGCTTATGGCAACAAAAGATGTCATCGTGCTTAC CAGCTCAGAAGTGGCTGCCGTATTTTGGCTGATAGAGTGCTATCAAGAGAACGCTGATATTCAGATTATCGAGAACGCAC ACCAGCTAGATACTGAAGCGATTGTGGTGCAATGCCGAGACAGCCTGAGTCAAAATAAAAAGGTCATACTTACCGCGCAG TTTCGTAGCCAGCTCCCTATCATCAACATCGCTTCACTGTGTAATGAGAAGCGTAAATCACTAATCAATATTGAATTGTT AGGCTGGGACGAAGAAACTCGTCTTCCTCATTCTTATAGCAGTTTCTAG
Upstream 100 bases:
>100_bases TGGCACCTTAGAGTTTGATCGTTCACAAGAGATGATAGATAGAGGCTACCATTTGGCACAGGCTAAATTGGGCAATCGAC TTTAATGTATTTGCTGCTGA
Downstream 100 bases:
>100_bases GTTATAAGAATTTCTAGCTTATAGCGGTTCCTAGTTAACCGCATTCGCTATATAGCAGCCGTTTTAGGTAGCAGACAATG TAAGCGCATTACTTCAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MRVFMETELKDLELHELMATKDVIVLTSSEVAAVFWLIECYQENADIQIIENAHQLDTEAIVVQCRDSLSQNKKVILTAQ FRSQLPIINIASLCNEKRKSLINIELLGWDEETRLPHSYSSF
Sequences:
>Translated_122_residues MRVFMETELKDLELHELMATKDVIVLTSSEVAAVFWLIECYQENADIQIIENAHQLDTEAIVVQCRDSLSQNKKVILTAQ FRSQLPIINIASLCNEKRKSLINIELLGWDEETRLPHSYSSF >Mature_122_residues MRVFMETELKDLELHELMATKDVIVLTSSEVAAVFWLIECYQENADIQIIENAHQLDTEAIVVQCRDSLSQNKKVILTAQ FRSQLPIINIASLCNEKRKSLINIELLGWDEETRLPHSYSSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14066; Mature: 14066
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFMETELKDLELHELMATKDVIVLTSSEVAAVFWLIECYQENADIQIIENAHQLDTEA CEEEECCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH IVVQCRDSLSQNKKVILTAQFRSQLPIINIASLCNEKRKSLINIELLGWDEETRLPHSYS HEEEEHHHHCCCCEEEEEEECCCCCCEEHHHHHHHHHHHCEEEEEEECCCCHHCCCCCCC SF CC >Mature Secondary Structure MRVFMETELKDLELHELMATKDVIVLTSSEVAAVFWLIECYQENADIQIIENAHQLDTEA CEEEECCCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH IVVQCRDSLSQNKKVILTAQFRSQLPIINIASLCNEKRKSLINIELLGWDEETRLPHSYS HEEEEHHHHCCCCEEEEEEECCCCCCEEHHHHHHHHHHHCEEEEEEECCCCHHCCCCCCC SF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA