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The map label for this gene is yqjE [H]

Identifier: 218709663

GI number: 218709663

Start: 1801121

End: 1802227

Strand: Direct

Name: yqjE [H]

Synonym: VS_1674

Alternate gene names: 218709663

Gene position: 1801121-1802227 (Clockwise)

Preceding gene: 218709661

Following gene: 218709666

Centisome position: 54.59

GC content: 47.34

Gene sequence:

>1107_bases
ATGACCCAAATTAATGAACAACGTCTCGTAGAACATTTCTGCGATCTAGTGAAAATTGATAGTGAATCTCGTAACGAAAA
AGCGATTGCTGAAGCTTTGGCTGAGCAACTCGGTGAACTGGGTTTTGAAGTTCACAAACTGGCGGTTCCTGAAGAAGTGT
CTAACGGTTTCAACATCTACGCTCGTCTAGATGGCACTCTTCCAGGTAGCACAGTGTTTAGCTGCCACATGGACACAGTA
ACGCCAGGTATCGGCATTGAGCCAATCATTGAAGACGGCATCATCCGCTCTAAAGGCAATACGATTCTAGGCGGCGACGA
CAAGTCTGGTATCGCAGCGATCATGGAAGCGGTTCGCGTAATCCAAGCTGAAGGCCAAGCGCACAAAACCATTGAAATCG
CGTTCACCGTATTCGAAGAAGGCGGTCTATTCGGTTCTTTGAACTTCGATATGTCTTACATTCAATCTGAGCACGCTATT
GTTCTAGATACAGGCGGCCCAATTGGCACCATCGTAAACGCAGCTCCGGGTCAGCAGAAAATTGTTGCTAAGATCAAAGG
CCGCCCTGCTCACGCTGGTTTAGCGCCAGAAGAAGGCATCAGCGCAATTCAAGTTGCTGCAGACGCGATCACCAAGATGA
ACCTACTTCGTATCGATGAAGAAACAACGGCAAACGTAGGTATTGTTGAAGGCGGTCAAGCAACAAACATCGTAATGCCA
GAGCTTAAAGTCGTGGCTGAAGCACGTTCACTAAACGGCGAAAAGCTAACGGCTCAAGTTGAGCACATGATCTCGACATT
CCAAGAGAGTGCAAAACAGTTCGGCGCTGAAGTAGAAATCGAATCAACGCGCGCTTACGATGCATTCGTTATTGCAGACG
ATCACCCGCACATTCTTTCTATCAAATCCGCATTCGAGAAGCTTGGCGTAACAGCGAACACTAAACGCACTGGCGGCGGT
AGCGATGCAAACAACTTCAATGCTAAAGGTCTTACAACGGTTAACCTTTCTACAGGTATGGCGAAAGTTCACACCACTGA
AGAGTACATTGCAGTGAAAGACATGGTCGCAATCACTGAGTTTGTTGTGGCTTACGTGACTCAATAG

Upstream 100 bases:

>100_bases
TTAACTCAGGCAATGATTCTGTAAAAAGGCGTTATAGTTATTTTCCTGTTCCAGCCTCCGTGACTTCTTTAGAAACAACG
GAGCAAAATGAGAATTAACA

Downstream 100 bases:

>100_bases
TCTTACTGGTTAACTAGCCGGCCTTATTTGTTAACAAGCCTGTCTTAGTCGTTGACGAAATAGAAAATGCCATCTAGTGA
ACGTCAAAAAGCCGAGTTCA

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MTQINEQRLVEHFCDLVKIDSESRNEKAIAEALAEQLGELGFEVHKLAVPEEVSNGFNIYARLDGTLPGSTVFSCHMDTV
TPGIGIEPIIEDGIIRSKGNTILGGDDKSGIAAIMEAVRVIQAEGQAHKTIEIAFTVFEEGGLFGSLNFDMSYIQSEHAI
VLDTGGPIGTIVNAAPGQQKIVAKIKGRPAHAGLAPEEGISAIQVAADAITKMNLLRIDEETTANVGIVEGGQATNIVMP
ELKVVAEARSLNGEKLTAQVEHMISTFQESAKQFGAEVEIESTRAYDAFVIADDHPHILSIKSAFEKLGVTANTKRTGGG
SDANNFNAKGLTTVNLSTGMAKVHTTEEYIAVKDMVAITEFVVAYVTQ

Sequences:

>Translated_368_residues
MTQINEQRLVEHFCDLVKIDSESRNEKAIAEALAEQLGELGFEVHKLAVPEEVSNGFNIYARLDGTLPGSTVFSCHMDTV
TPGIGIEPIIEDGIIRSKGNTILGGDDKSGIAAIMEAVRVIQAEGQAHKTIEIAFTVFEEGGLFGSLNFDMSYIQSEHAI
VLDTGGPIGTIVNAAPGQQKIVAKIKGRPAHAGLAPEEGISAIQVAADAITKMNLLRIDEETTANVGIVEGGQATNIVMP
ELKVVAEARSLNGEKLTAQVEHMISTFQESAKQFGAEVEIESTRAYDAFVIADDHPHILSIKSAFEKLGVTANTKRTGGG
SDANNFNAKGLTTVNLSTGMAKVHTTEEYIAVKDMVAITEFVVAYVTQ
>Mature_367_residues
TQINEQRLVEHFCDLVKIDSESRNEKAIAEALAEQLGELGFEVHKLAVPEEVSNGFNIYARLDGTLPGSTVFSCHMDTVT
PGIGIEPIIEDGIIRSKGNTILGGDDKSGIAAIMEAVRVIQAEGQAHKTIEIAFTVFEEGGLFGSLNFDMSYIQSEHAIV
LDTGGPIGTIVNAAPGQQKIVAKIKGRPAHAGLAPEEGISAIQVAADAITKMNLLRIDEETTANVGIVEGGQATNIVMPE
LKVVAEARSLNGEKLTAQVEHMISTFQESAKQFGAEVEIESTRAYDAFVIADDHPHILSIKSAFEKLGVTANTKRTGGGS
DANNFNAKGLTTVNLSTGMAKVHTTEEYIAVKDMVAITEFVVAYVTQ

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1787372, Length=417, Percent_Identity=26.1390887290168, Blast_Score=87, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17551016, Length=243, Percent_Identity=28.3950617283951, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.4.11.4 [C]

Molecular weight: Translated: 39264; Mature: 39133

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQINEQRLVEHFCDLVKIDSESRNEKAIAEALAEQLGELGFEVHKLAVPEEVSNGFNIY
CCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCEEEE
ARLDGTLPGSTVFSCHMDTVTPGIGIEPIIEDGIIRSKGNTILGGDDKSGIAAIMEAVRV
EEECCCCCCCEEEEEEECCCCCCCCCCHHHCCCEEECCCCEEECCCCCCHHHHHHHHHHH
IQAEGQAHKTIEIAFTVFEEGGLFGSLNFDMSYIQSEHAIVLDTGGPIGTIVNAAPGQQK
HHCCCCCCEEEEEEEEEEECCCEEEEECCCHHHHCCCCEEEEECCCCCEEEEECCCCCCE
IVAKIKGRPAHAGLAPEEGISAIQVAADAITKMNLLRIDEETTANVGIVEGGQATNIVMP
EHEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCEEECC
ELKVVAEARSLNGEKLTAQVEHMISTFQESAKQFGAEVEIESTRAYDAFVIADDHPHILS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCEEE
IKSAFEKLGVTANTKRTGGGSDANNFNAKGLTTVNLSTGMAKVHTTEEYIAVKDMVAITE
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHH
FVVAYVTQ
HHHHHHCC
>Mature Secondary Structure 
TQINEQRLVEHFCDLVKIDSESRNEKAIAEALAEQLGELGFEVHKLAVPEEVSNGFNIY
CCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHCCCEEEE
ARLDGTLPGSTVFSCHMDTVTPGIGIEPIIEDGIIRSKGNTILGGDDKSGIAAIMEAVRV
EEECCCCCCCEEEEEEECCCCCCCCCCHHHCCCEEECCCCEEECCCCCCHHHHHHHHHHH
IQAEGQAHKTIEIAFTVFEEGGLFGSLNFDMSYIQSEHAIVLDTGGPIGTIVNAAPGQQK
HHCCCCCCEEEEEEEEEEECCCEEEEECCCHHHHCCCCEEEEECCCCCEEEEECCCCCCE
IVAKIKGRPAHAGLAPEEGISAIQVAADAITKMNLLRIDEETTANVGIVEGGQATNIVMP
EHEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCEEECC
ELKVVAEARSLNGEKLTAQVEHMISTFQESAKQFGAEVEIESTRAYDAFVIADDHPHILS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCEEE
IKSAFEKLGVTANTKRTGGGSDANNFNAKGLTTVNLSTGMAKVHTTEEYIAVKDMVAITE
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHH
FVVAYVTQ
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]