| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218709596
Identifier: 218709596
GI number: 218709596
Start: 1723658
End: 1724254
Strand: Reverse
Name: 218709596
Synonym: VS_1606
Alternate gene names: NA
Gene position: 1724254-1723658 (Counterclockwise)
Preceding gene: 218709597
Following gene: 218709595
Centisome position: 52.26
GC content: 44.56
Gene sequence:
>597_bases ATGGATGATCACTCTGAGATCTGGCGTCAGTATTACCAAAAGGCACTAAGCAAACCTCATTTAAAGAGAACTGAGTACGC AATTAAACTGAATGAGTCAGGCTTAAATGTTGCGATTGATTGTGGTTGTGGAACAGGTAGTGACATCGCCTTTTTAGAAC AGCAAGCGTATCAAGTGTATGGCTTCGACGTTAATCCTGATTCGATTGCACTATGTCGGGATCGTTTTGGTCGCAAATCT TTGGTCGAGATATCTGAAAGTGGATTTGAACACTATGATTACCCGAAATCTGGCGTAGTGATTGCCAATTCGAGTCTGTT TTTTGCTGATCCAACCCGTTTTGACGAGGTTTGGCACAATATTGAAAACTGTCTTGAAGTGGGAGGCGTGTTCGCGGGCG ATTTCATGGGCGTCGATGACAGTTGGGCACATGGCTATCGAACCCCAACAACGCCGTTAACAAAAGCCAAAGTACTTAGC TTATTCAACGACTTTGAGATAGTACGATTCCATGAGCGAGACGAACAAGCACTCACGTCGCTGGGTAGGATGAAGCATTG GCACACTTATTCGGTTGTTGCGATTAAGCGCTGTTAA
Upstream 100 bases:
>100_bases TTGAAAGCGGTGTGGTTGAACACGGAGGGCGCTGATCTTAAGTCAGGGCATCCGAATGTCATGCAAGTTCAATCCCTAAG CGAACTGTTGGAGAAGTACC
Downstream 100 bases:
>100_bases AATATCAGTATTTAAAACTCGTTTGGATGCATGTCTGTTTTGACGCCAACCTCTCATCTCTTTGTTATTTAATCCTCTAA GCTAACTCTAGTTTCCACTA
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: Methyltransferase Type; Dimethyladenosine Transferase; Tellurite Resistance Protein-Related Protein; Tellurite Resistance Protein-Like Protein; Methyltransferase Domain Family
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MDDHSEIWRQYYQKALSKPHLKRTEYAIKLNESGLNVAIDCGCGTGSDIAFLEQQAYQVYGFDVNPDSIALCRDRFGRKS LVEISESGFEHYDYPKSGVVIANSSLFFADPTRFDEVWHNIENCLEVGGVFAGDFMGVDDSWAHGYRTPTTPLTKAKVLS LFNDFEIVRFHERDEQALTSLGRMKHWHTYSVVAIKRC
Sequences:
>Translated_198_residues MDDHSEIWRQYYQKALSKPHLKRTEYAIKLNESGLNVAIDCGCGTGSDIAFLEQQAYQVYGFDVNPDSIALCRDRFGRKS LVEISESGFEHYDYPKSGVVIANSSLFFADPTRFDEVWHNIENCLEVGGVFAGDFMGVDDSWAHGYRTPTTPLTKAKVLS LFNDFEIVRFHERDEQALTSLGRMKHWHTYSVVAIKRC >Mature_198_residues MDDHSEIWRQYYQKALSKPHLKRTEYAIKLNESGLNVAIDCGCGTGSDIAFLEQQAYQVYGFDVNPDSIALCRDRFGRKS LVEISESGFEHYDYPKSGVVIANSSLFFADPTRFDEVWHNIENCLEVGGVFAGDFMGVDDSWAHGYRTPTTPLTKAKVLS LFNDFEIVRFHERDEQALTSLGRMKHWHTYSVVAIKRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22602; Mature: 22602
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDHSEIWRQYYQKALSKPHLKRTEYAIKLNESGLNVAIDCGCGTGSDIAFLEQQAYQVY CCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHCCEEEE GFDVNPDSIALCRDRFGRKSLVEISESGFEHYDYPKSGVVIANSSLFFADPTRFDEVWHN EECCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHH IENCLEVGGVFAGDFMGVDDSWAHGYRTPTTPLTKAKVLSLFNDFEIVRFHERDEQALTS HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHH LGRMKHWHTYSVVAIKRC HHHHHCCCEEEEEEEECC >Mature Secondary Structure MDDHSEIWRQYYQKALSKPHLKRTEYAIKLNESGLNVAIDCGCGTGSDIAFLEQQAYQVY CCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHCCEEEE GFDVNPDSIALCRDRFGRKSLVEISESGFEHYDYPKSGVVIANSSLFFADPTRFDEVWHN EECCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEECCEEEEECCHHHHHHHHH IENCLEVGGVFAGDFMGVDDSWAHGYRTPTTPLTKAKVLSLFNDFEIVRFHERDEQALTS HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHH LGRMKHWHTYSVVAIKRC HHHHHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA