Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218709592

Identifier: 218709592

GI number: 218709592

Start: 1721757

End: 1721918

Strand: Reverse

Name: 218709592

Synonym: VS_1602

Alternate gene names: NA

Gene position: 1721918-1721757 (Counterclockwise)

Preceding gene: 218709594

Following gene: 218709591

Centisome position: 52.19

GC content: 45.68

Gene sequence:

>162_bases
ATGAGAACCGTATACACCACCGAAGGCGACATCAACGCAAAGAAACAGAAAGACGCTTACCCAAAATTGGCGCTATGTGA
TAACTGCGTTAGAGACTATGTGGTGATTGCTCAAGGAGAACGTACCTATAAGCCTTGTGCGAAATGTGGCGCAGACGATT
AA

Upstream 100 bases:

>100_bases
GAAGTACTTAATATTACTTTAACTACCTAACACCACTCTAAACAAGGCTGTAAACAGTGATACAATTTGCGCCTAGCAAG
TTATTAAAACAAGGCATAAA

Downstream 100 bases:

>100_bases
TGCGCCTTGATAAATACCTTTGTAAAAGCACAGAACTAACAAAACTCGAAGCCGTTCAGCGAATCCAAAACGGTGAGGTG
AGTGTGAACAGCGTGGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MRTVYTTEGDINAKKQKDAYPKLALCDNCVRDYVVIAQGERTYKPCAKCGADD

Sequences:

>Translated_53_residues
MRTVYTTEGDINAKKQKDAYPKLALCDNCVRDYVVIAQGERTYKPCAKCGADD
>Mature_53_residues
MRTVYTTEGDINAKKQKDAYPKLALCDNCVRDYVVIAQGERTYKPCAKCGADD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5931; Mature: 5931

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
7.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVYTTEGDINAKKQKDAYPKLALCDNCVRDYVVIAQGERTYKPCAKCGADD
CCEECCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEECCCCCCCHHHCCCCCC
>Mature Secondary Structure
MRTVYTTEGDINAKKQKDAYPKLALCDNCVRDYVVIAQGERTYKPCAKCGADD
CCEECCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEECCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA