Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is yecA [C]

Identifier: 218709570

GI number: 218709570

Start: 1708959

End: 1709474

Strand: Direct

Name: yecA [C]

Synonym: VS_1580

Alternate gene names: 218709570

Gene position: 1708959-1709474 (Clockwise)

Preceding gene: 218709564

Following gene: 218709586

Centisome position: 51.8

GC content: 41.09

Gene sequence:

>516_bases
TTGAATTTCGAAATTTGTCTAATAGGAGCAAAGCTAGAGAACAAACCGTTACTAGCAAACAAAAACCAAACAGCCTTTGC
TCACATCACTGCTTTATCAATTGCAATATATGCGTATAATCCCCGCTCCATTGCGCTATCGCCATTAAAAATAGCGCCAT
TCAACACTTTTAATGAGTACCCAATGTCGAAACTATTTTTCAAAGGCCGTATCGAAACAAGACAGAACCACGTTCTTGCT
GGCTACAACGTAAACCGCGATGTAAAAGCGGGTACTGAAGAATCTCCAATTGCTGTAGTAGTTCAAACTGAAGCGCGCAA
AGCAGAAGTTGAAGCATTAGCTGCTGAAAATACTATCTTCGTTACTGTTACAGTCGACGCAGACAAAGAAGAGAACACCA
TCGAGCTTGATACTCTACTGAACAAGCCAAAAACGATGACGTTTGAAAAGACCCCTAACCGTAACGACCCATGTTCTTGC
GGTAGCGGTAAGAAATACAAGAAATGTTGTGCATAA

Upstream 100 bases:

>100_bases
AATCCCACAGGATGGCATCTAACTTCATGGGGTATCTCGTTGTTTAAATTGACGATTTCAATTTATCACTTGAAACCCTA
TTGAGGGAAATCTTATTGTC

Downstream 100 bases:

>100_bases
GCACTTCTGATTCATGCTACTCATAGTGTGATTGAGATGATTGATTAAAACGGGCAGATCACTACGATCTGCCCGTTTTT
TTATGTCTCGAGTTGCTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: SEC-C Motif Domain-Containing Protein; SEC-C Motif Domain Protein; Preprotein Translocase Subunit-Like Protein; ATPase

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MNFEICLIGAKLENKPLLANKNQTAFAHITALSIAIYAYNPRSIALSPLKIAPFNTFNEYPMSKLFFKGRIETRQNHVLA
GYNVNRDVKAGTEESPIAVVVQTEARKAEVEALAAENTIFVTVTVDADKEENTIELDTLLNKPKTMTFEKTPNRNDPCSC
GSGKKYKKCCA

Sequences:

>Translated_171_residues
MNFEICLIGAKLENKPLLANKNQTAFAHITALSIAIYAYNPRSIALSPLKIAPFNTFNEYPMSKLFFKGRIETRQNHVLA
GYNVNRDVKAGTEESPIAVVVQTEARKAEVEALAAENTIFVTVTVDADKEENTIELDTLLNKPKTMTFEKTPNRNDPCSC
GSGKKYKKCCA
>Mature_171_residues
MNFEICLIGAKLENKPLLANKNQTAFAHITALSIAIYAYNPRSIALSPLKIAPFNTFNEYPMSKLFFKGRIETRQNHVLA
GYNVNRDVKAGTEESPIAVVVQTEARKAEVEALAAENTIFVTVTVDADKEENTIELDTLLNKPKTMTFEKTPNRNDPCSC
GSGKKYKKCCA

Specific function: Unknown

COG id: COG0653

COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18961; Mature: 18961

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFEICLIGAKLENKPLLANKNQTAFAHITALSIAIYAYNPRSIALSPLKIAPFNTFNEY
CCEEEEEEECEECCCCEEECCCCCEEEEEEEEEEEEEEECCCCEEECCEEECCCCCCCCC
PMSKLFFKGRIETRQNHVLAGYNVNRDVKAGTEESPIAVVVQTEARKAEVEALAAENTIF
CCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHEEEEECCCEEE
VTVTVDADKEENTIELDTLLNKPKTMTFEKTPNRNDPCSCGSGKKYKKCCA
EEEEEECCCCCCEEEEEHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MNFEICLIGAKLENKPLLANKNQTAFAHITALSIAIYAYNPRSIALSPLKIAPFNTFNEY
CCEEEEEEECEECCCCEEECCCCCEEEEEEEEEEEEEEECCCCEEECCEEECCCCCCCCC
PMSKLFFKGRIETRQNHVLAGYNVNRDVKAGTEESPIAVVVQTEARKAEVEALAAENTIF
CCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHEEEEECCCEEE
VTVTVDADKEENTIELDTLLNKPKTMTFEKTPNRNDPCSCGSGKKYKKCCA
EEEEEECCCCCCEEEEEHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA