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The map label for this gene is 218709559

Identifier: 218709559

GI number: 218709559

Start: 1701719

End: 1703092

Strand: Direct

Name: 218709559

Synonym: VS_1569

Alternate gene names: NA

Gene position: 1701719-1703092 (Clockwise)

Preceding gene: 218709558

Following gene: 218709560

Centisome position: 51.58

GC content: 44.69

Gene sequence:

>1374_bases
ATGCCAAAAAACAAAGTAAACACATTCAACACACCTAGCCCCGATTTTAAAGGGTTCGCGAAAGTTTCACTGTTAGTGGC
CTTCTCGCTTGCCCTTTCAGGCTGCAGCGCGAAAAACAAAGCAACCAACACAAGCCCATCTGCTGAGCAGCAGAATCAAG
CCTACACAGCCAAGAGCTTCAATAAACCCAATAGCAAAGTCACGTTGATCCTCTCTTTTTCTGGGGGCGGCACGCGTGCG
GCGGCGCTCTCGTATGGTGTGCTGCAAGCATTGCGCGACACCAACATCCAAGTAAATGGTGAAACGGTCAATCTGTTAGA
AGAAGTTGATATGATCAGTTCGGTATCCGGTGGCAGCTTTACCGCCGCGTATTATGGTTTGTATGGTGACCAGATATTCG
AAGATTACGAAGAAACGTTCCTTTATCACGAAGTCTCGAAAGATCTGTTCTCCATCCTTTTATCTCCGGCTTATTGGTTC
TCGTACGCCACCAGAACAGACAAAGCCACCGACTATTACAAAGCCAACATCTTCGGTGAAAGTACATTTGCCGACATGCA
CCGAGAAGATGCACCCTACATTGTCATTAACGCGACCGACATTTCAACGGGTTCGCGTTTTTCATTCACACAAGAGTATT
TTGACCTCATATGTTCAGACTTGAACAGCTATTCAGTGTCCAGTTCGGTGACGGCTTCTTCTGCTGTGCCTTTCGTTTTC
ACACCTGTGGTACTAGAAAACAAAAATGACTGTGATAAATCAGAGCATTTACAACCCTCGTTTGAGGCCACGAGTTACCG
CAACCGAAATCTGATCAAGTCGTTAAAGTCATATAGCAATAAGGATGATGTGAGTTATCTCCACCTTGTGGATGGCGGAA
TTACTGACAACCTCGGTTTGCTATCGGTATATGAGATGTCTGAATACTTGCGTTACAACGACAACGAAGAGTTGAAAAAC
TTGTACGACAACCAACACGCGCGCCCTATTGTCATCATTTCGGTTGATGCATCGACGACGCCAGAATCTGGCATTGGAGA
GTCGATTGAAGCACCTTCCATGAAACAAACGGTGGATGTCATCACCGATATACAGTTGCATCGCTACAACGATACAACAA
AAGATTTGATCGTTGACGAGTTGCAATCTTGGCAAGAACTGGCCTCTCATCAAGGTCGTAAGGTTTCACCCTACTTCATT
GAGATCAGCTTGAATAAATCAGACAACAGCGCAAAGCGATATTTGCTCAATCAAATTCCGACGGACTTTATGATAGACAA
AGAAAACGTCGACCTATTGATTGAAGAAGGTAACAAACAACTTGTTGCCGATCCGGAATTCCGAAACTTCTTATCATTTG
AACGCAACAAATAA

Upstream 100 bases:

>100_bases
AAAATCGTGACACTGAATCACAAGCGATGCTATTGATGGCATATTAGATATCAACGAAAATCGCCTTTCACTCAATCACA
ACGTTAGTTTGAAATGCGCT

Downstream 100 bases:

>100_bases
TGCTAATCTAGTTGCTTATTAAAGCGCAATTTGGCAACTAAAGTTACGTCATAACTTCACCTTTACAAGGATCACTATGG
AATTTGAAAACAACATCTTA

Product: putative patatine

Products: NA

Alternate protein names: Patatin-Like Phospholipase Family Protein; Patatin-Like Phospholipase Domain-Containing Protein; Patatin-Like Phospholipase; Patatine; Signal Peptide; Phospholipase Patatin Family; Phospholipase; Lipoprotein

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MPKNKVNTFNTPSPDFKGFAKVSLLVAFSLALSGCSAKNKATNTSPSAEQQNQAYTAKSFNKPNSKVTLILSFSGGGTRA
AALSYGVLQALRDTNIQVNGETVNLLEEVDMISSVSGGSFTAAYYGLYGDQIFEDYEETFLYHEVSKDLFSILLSPAYWF
SYATRTDKATDYYKANIFGESTFADMHREDAPYIVINATDISTGSRFSFTQEYFDLICSDLNSYSVSSSVTASSAVPFVF
TPVVLENKNDCDKSEHLQPSFEATSYRNRNLIKSLKSYSNKDDVSYLHLVDGGITDNLGLLSVYEMSEYLRYNDNEELKN
LYDNQHARPIVIISVDASTTPESGIGESIEAPSMKQTVDVITDIQLHRYNDTTKDLIVDELQSWQELASHQGRKVSPYFI
EISLNKSDNSAKRYLLNQIPTDFMIDKENVDLLIEEGNKQLVADPEFRNFLSFERNK

Sequences:

>Translated_457_residues
MPKNKVNTFNTPSPDFKGFAKVSLLVAFSLALSGCSAKNKATNTSPSAEQQNQAYTAKSFNKPNSKVTLILSFSGGGTRA
AALSYGVLQALRDTNIQVNGETVNLLEEVDMISSVSGGSFTAAYYGLYGDQIFEDYEETFLYHEVSKDLFSILLSPAYWF
SYATRTDKATDYYKANIFGESTFADMHREDAPYIVINATDISTGSRFSFTQEYFDLICSDLNSYSVSSSVTASSAVPFVF
TPVVLENKNDCDKSEHLQPSFEATSYRNRNLIKSLKSYSNKDDVSYLHLVDGGITDNLGLLSVYEMSEYLRYNDNEELKN
LYDNQHARPIVIISVDASTTPESGIGESIEAPSMKQTVDVITDIQLHRYNDTTKDLIVDELQSWQELASHQGRKVSPYFI
EISLNKSDNSAKRYLLNQIPTDFMIDKENVDLLIEEGNKQLVADPEFRNFLSFERNK
>Mature_456_residues
PKNKVNTFNTPSPDFKGFAKVSLLVAFSLALSGCSAKNKATNTSPSAEQQNQAYTAKSFNKPNSKVTLILSFSGGGTRAA
ALSYGVLQALRDTNIQVNGETVNLLEEVDMISSVSGGSFTAAYYGLYGDQIFEDYEETFLYHEVSKDLFSILLSPAYWFS
YATRTDKATDYYKANIFGESTFADMHREDAPYIVINATDISTGSRFSFTQEYFDLICSDLNSYSVSSSVTASSAVPFVFT
PVVLENKNDCDKSEHLQPSFEATSYRNRNLIKSLKSYSNKDDVSYLHLVDGGITDNLGLLSVYEMSEYLRYNDNEELKNL
YDNQHARPIVIISVDASTTPESGIGESIEAPSMKQTVDVITDIQLHRYNDTTKDLIVDELQSWQELASHQGRKVSPYFIE
ISLNKSDNSAKRYLLNQIPTDFMIDKENVDLLIEEGNKQLVADPEFRNFLSFERNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51162; Mature: 51031

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKNKVNTFNTPSPDFKGFAKVSLLVAFSLALSGCSAKNKATNTSPSAEQQNQAYTAKSF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHCC
NKPNSKVTLILSFSGGGTRAAALSYGVLQALRDTNIQVNGETVNLLEEVDMISSVSGGSF
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCE
TAAYYGLYGDQIFEDYEETFLYHEVSKDLFSILLSPAYWFSYATRTDKATDYYKANIFGE
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEECCC
STFADMHREDAPYIVINATDISTGSRFSFTQEYFDLICSDLNSYSVSSSVTASSAVPFVF
HHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
TPVVLENKNDCDKSEHLQPSFEATSYRNRNLIKSLKSYSNKDDVSYLHLVDGGITDNLGL
EEEEECCCCCCCHHHCCCCCCCHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCH
LSVYEMSEYLRYNDNEELKNLYDNQHARPIVIISVDASTTPESGIGESIEAPSMKQTVDV
HHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH
ITDIQLHRYNDTTKDLIVDELQSWQELASHQGRKVSPYFIEISLNKSDNSAKRYLLNQIP
HHCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCC
TDFMIDKENVDLLIEEGNKQLVADPEFRNFLSFERNK
CCEEEECCCCEEEEECCCCEEEECCHHHHHHHCCCCC
>Mature Secondary Structure 
PKNKVNTFNTPSPDFKGFAKVSLLVAFSLALSGCSAKNKATNTSPSAEQQNQAYTAKSF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHCC
NKPNSKVTLILSFSGGGTRAAALSYGVLQALRDTNIQVNGETVNLLEEVDMISSVSGGSF
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCE
TAAYYGLYGDQIFEDYEETFLYHEVSKDLFSILLSPAYWFSYATRTDKATDYYKANIFGE
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEECCC
STFADMHREDAPYIVINATDISTGSRFSFTQEYFDLICSDLNSYSVSSSVTASSAVPFVF
HHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
TPVVLENKNDCDKSEHLQPSFEATSYRNRNLIKSLKSYSNKDDVSYLHLVDGGITDNLGL
EEEEECCCCCCCHHHCCCCCCCHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCH
LSVYEMSEYLRYNDNEELKNLYDNQHARPIVIISVDASTTPESGIGESIEAPSMKQTVDV
HHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHH
ITDIQLHRYNDTTKDLIVDELQSWQELASHQGRKVSPYFIEISLNKSDNSAKRYLLNQIP
HHCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHCC
TDFMIDKENVDLLIEEGNKQLVADPEFRNFLSFERNK
CCEEEECCCCEEEEECCCCEEEECCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA