| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709558
Identifier: 218709558
GI number: 218709558
Start: 1700854
End: 1701513
Strand: Direct
Name: 218709558
Synonym: VS_1568
Alternate gene names: NA
Gene position: 1700854-1701513 (Clockwise)
Preceding gene: 218709556
Following gene: 218709559
Centisome position: 51.55
GC content: 43.79
Gene sequence:
>660_bases ATGCCAAACGAATTCGATTTACCTATCCTTTATTCTTTAAGACGCTGCCCTTACGCTATGCGAGGAAGGATGGGCATCGC ACTATCACAGCAGAAAGTGTTACTTCGAGAAATTGTTACCAAAGATAAGCCTAGCGAACTATTGGCCAGTTCGCCAAAAG GCACTGTTCCAGTATTGGTATTGCCTGATGGTCAAATCATCGAACAGAGCTTAGATGTGATGAATTGGGCGCTTCAACAA AACGATCCTCAAGATCTTCTGCGCTTAAGCAATCCAATACTTAGCGAACAAGTCCAACAACTCATTAAAACCAACGATGA AGAATTCATTGGTCACTTAGAGAAATACCGCGCTTCAGTGCGTTACCGAAACATCGATAGTGAACAACGTCGACAAGCCT GCGAAGCGTTCATTAGTCAGTTAGAAGCGCTACTCACCGATCAGCCCTACTTTTTTGGAGAAACCCCAAGCTTAGCCGAT TTTGCCGTGATGCCTTTTGTTAGCCAGTTCGTAAGAGTCGAGAAGAAGTTGTTTGTGCAATCTGAATATCAGAACGTTGG ACGTTGGTTAAGAACGCATCTCGACAGTAAGCTCTACACCCAAGTCATGAAGCAATACCCTTTGTGGAATGAAACCAAGC AAGATTGTGTTTTTGGGTAG
Upstream 100 bases:
>100_bases GAAGTCGCTCACTTACTTATAATTTTTAAGGCGCGTATTCTACCTACAACACGATCTCTTTACCACCTAACAACACTTTC CAAACTAAATGACCTCAATA
Downstream 100 bases:
>100_bases CATTAAGTCGCTATGAATTGCTGGAGATAACTCCATATTGCTGAAGATTGCCGAAGATGACTGAAAATAGTTCTAAATAT GCATAGACAGCTCTCTATTG
Product: putative glutathione S-transferase
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase N Terminus; Glutathione S-Transferase N-Terminal Domain; Glutaredoxin; Glutathione-S-Transferase Domain-Containing Protein; Rhodanese Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Family Protein; Glutathione S-Transferase C-Terminal-Like Domain; Glutathione S-Transferase Domain; Glutathione-S-Transferase Domain Protein; Glutathione S-Transferase Omega Class; Rhodanese Domain-Containing Protein; Glutathione S-Transferase N-Terminal Domain Protein; Stringent Starvation Protein A; Glutathione S-Transferase N Terminal Domain Protein; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase C-Terminal Domain Protein
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MPNEFDLPILYSLRRCPYAMRGRMGIALSQQKVLLREIVTKDKPSELLASSPKGTVPVLVLPDGQIIEQSLDVMNWALQQ NDPQDLLRLSNPILSEQVQQLIKTNDEEFIGHLEKYRASVRYRNIDSEQRRQACEAFISQLEALLTDQPYFFGETPSLAD FAVMPFVSQFVRVEKKLFVQSEYQNVGRWLRTHLDSKLYTQVMKQYPLWNETKQDCVFG
Sequences:
>Translated_219_residues MPNEFDLPILYSLRRCPYAMRGRMGIALSQQKVLLREIVTKDKPSELLASSPKGTVPVLVLPDGQIIEQSLDVMNWALQQ NDPQDLLRLSNPILSEQVQQLIKTNDEEFIGHLEKYRASVRYRNIDSEQRRQACEAFISQLEALLTDQPYFFGETPSLAD FAVMPFVSQFVRVEKKLFVQSEYQNVGRWLRTHLDSKLYTQVMKQYPLWNETKQDCVFG >Mature_218_residues PNEFDLPILYSLRRCPYAMRGRMGIALSQQKVLLREIVTKDKPSELLASSPKGTVPVLVLPDGQIIEQSLDVMNWALQQN DPQDLLRLSNPILSEQVQQLIKTNDEEFIGHLEKYRASVRYRNIDSEQRRQACEAFISQLEALLTDQPYFFGETPSLADF AVMPFVSQFVRVEKKLFVQSEYQNVGRWLRTHLDSKLYTQVMKQYPLWNETKQDCVFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25433; Mature: 25301
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNEFDLPILYSLRRCPYAMRGRMGIALSQQKVLLREIVTKDKPSELLASSPKGTVPVLV CCCCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEE LPDGQIIEQSLDVMNWALQQNDPQDLLRLSNPILSEQVQQLIKTNDEEFIGHLEKYRASV CCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RYRNIDSEQRRQACEAFISQLEALLTDQPYFFGETPSLADFAVMPFVSQFVRVEKKLFVQ HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SEYQNVGRWLRTHLDSKLYTQVMKQYPLWNETKQDCVFG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC >Mature Secondary Structure PNEFDLPILYSLRRCPYAMRGRMGIALSQQKVLLREIVTKDKPSELLASSPKGTVPVLV CCCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEE LPDGQIIEQSLDVMNWALQQNDPQDLLRLSNPILSEQVQQLIKTNDEEFIGHLEKYRASV CCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RYRNIDSEQRRQACEAFISQLEALLTDQPYFFGETPSLADFAVMPFVSQFVRVEKKLFVQ HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SEYQNVGRWLRTHLDSKLYTQVMKQYPLWNETKQDCVFG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA