| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is artI [H]
Identifier: 218709553
GI number: 218709553
Start: 1693685
End: 1694428
Strand: Reverse
Name: artI [H]
Synonym: VS_1563
Alternate gene names: 218709553
Gene position: 1694428-1693685 (Counterclockwise)
Preceding gene: 218709554
Following gene: 218709552
Centisome position: 51.36
GC content: 43.95
Gene sequence:
>744_bases ATGAAAAAGATTCTACTAGCTTCACTTATCGGCCTTTCTTCTGCAGGCATGGCTGTTAATGCATCGGCACAAGACGAAAT CAAATTCGCAATGGAAGCAACTTACGCACCATTCGAATACATGGACGAGAACAACCAAATCCAAGGTTTTGACGTAGACC TAGCAAACGCACTTTGTGAAGAGATGAAAGCAACTTGTACTTTTCACAACCAAGCGTTCGATAGCTTGATCCCAGCGCTT AAATTCAAACGTTACGATGCCGCTATTTCGGCAATGGACATCACTGAAGCGCGTCTTAAACAAGTAAACTTCTCTAACGC TTACTACGACAACTCTGCAGCATTCATCTCTATTGAAGGCAAAGTAGCAGACCAAGCAGCACTAGAAGGTAAGCGTGTTG GCGTTCAAAACGGTTCAACTCACCAGAGCTTCCTACTTGAGCAAATGGCTGGCGTAACAGCGGTACCTTACTCAAGCTAC CAAGATGCATTCATCGACATGAAAAACGGTCGTATCGATTCAGTATTTGGTGACACAGCGGTAGTAGCTGAATGGTTCAA AAAGCAAGACAACCTAACGTATGTTGGCGACCAAGTAACAAACCAAGAGTACTTCGGTAACGGCTTTGGTATCGCAGTAA ACAAGAGTAACCAAGAACTTGTAGACCAGCTTAACGTTGCACTTGCAGCAGTGAAAGCGAACGGCGAATACGACAAGATC TTTAACAAGTACTTCGGTAAGTAA
Upstream 100 bases:
>100_bases GCTAATCACAACACAATTTAGTCAAACATAGATTCAGTTAAAACAAATCAAATTATAAAAATGGCCACAGGTCAAAATCA CACAGATTCGGAGTAACAAA
Downstream 100 bases:
>100_bases TTTATGGAATTAACGGGTTACTCTTTAGGGCTCGTCGAAGCAAGCTGGATGACAGTTCAGCTTGCGTTCGTAAGCCTATT GGTAGGATTGGTTCTAGCAG
Product: ABC transporter substrate-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKKILLASLIGLSSAGMAVNASAQDEIKFAMEATYAPFEYMDENNQIQGFDVDLANALCEEMKATCTFHNQAFDSLIPAL KFKRYDAAISAMDITEARLKQVNFSNAYYDNSAAFISIEGKVADQAALEGKRVGVQNGSTHQSFLLEQMAGVTAVPYSSY QDAFIDMKNGRIDSVFGDTAVVAEWFKKQDNLTYVGDQVTNQEYFGNGFGIAVNKSNQELVDQLNVALAAVKANGEYDKI FNKYFGK
Sequences:
>Translated_247_residues MKKILLASLIGLSSAGMAVNASAQDEIKFAMEATYAPFEYMDENNQIQGFDVDLANALCEEMKATCTFHNQAFDSLIPAL KFKRYDAAISAMDITEARLKQVNFSNAYYDNSAAFISIEGKVADQAALEGKRVGVQNGSTHQSFLLEQMAGVTAVPYSSY QDAFIDMKNGRIDSVFGDTAVVAEWFKKQDNLTYVGDQVTNQEYFGNGFGIAVNKSNQELVDQLNVALAAVKANGEYDKI FNKYFGK >Mature_247_residues MKKILLASLIGLSSAGMAVNASAQDEIKFAMEATYAPFEYMDENNQIQGFDVDLANALCEEMKATCTFHNQAFDSLIPAL KFKRYDAAISAMDITEARLKQVNFSNAYYDNSAAFISIEGKVADQAALEGKRVGVQNGSTHQSFLLEQMAGVTAVPYSSY QDAFIDMKNGRIDSVFGDTAVVAEWFKKQDNLTYVGDQVTNQEYFGNGFGIAVNKSNQELVDQLNVALAAVKANGEYDKI FNKYFGK
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787088, Length=247, Percent_Identity=57.085020242915, Blast_Score=300, Evalue=8e-83, Organism=Escherichia coli, GI1787085, Length=245, Percent_Identity=53.469387755102, Blast_Score=272, Evalue=2e-74, Organism=Escherichia coli, GI1788649, Length=254, Percent_Identity=35.4330708661417, Blast_Score=160, Evalue=5e-41, Organism=Escherichia coli, GI1788648, Length=229, Percent_Identity=35.8078602620087, Blast_Score=150, Evalue=5e-38, Organism=Escherichia coli, GI1787031, Length=251, Percent_Identity=29.8804780876494, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI1788228, Length=223, Percent_Identity=27.8026905829596, Blast_Score=105, Evalue=2e-24,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27161; Mature: 27161
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLASLIGLSSAGMAVNASAQDEIKFAMEATYAPFEYMDENNQIQGFDVDLANALCE CCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCHHHCCCCCCEEECCHHHHHHHHH EMKATCTFHNQAFDSLIPALKFKRYDAAISAMDITEARLKQVNFSNAYYDNSAAFISIEG HHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECC KVADQAALEGKRVGVQNGSTHQSFLLEQMAGVTAVPYSSYQDAFIDMKNGRIDSVFGDTA CCCHHHHHCCCEECCCCCCHHHHHHHHHHCCCEECCCCCCCCCEEECCCCEECCCCCCHH VVAEWFKKQDNLTYVGDQVTNQEYFGNGFGIAVNKSNQELVDQLNVALAAVKANGEYDKI HHHHHHHCCCCEEEECCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHEEEEECCCCHHHH FNKYFGK HHHHHCC >Mature Secondary Structure MKKILLASLIGLSSAGMAVNASAQDEIKFAMEATYAPFEYMDENNQIQGFDVDLANALCE CCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCHHHCCCCCCEEECCHHHHHHHHH EMKATCTFHNQAFDSLIPALKFKRYDAAISAMDITEARLKQVNFSNAYYDNSAAFISIEG HHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECC KVADQAALEGKRVGVQNGSTHQSFLLEQMAGVTAVPYSSYQDAFIDMKNGRIDSVFGDTA CCCHHHHHCCCEECCCCCCHHHHHHHHHHCCCEECCCCCCCCCEEECCCCEECCCCCCHH VVAEWFKKQDNLTYVGDQVTNQEYFGNGFGIAVNKSNQELVDQLNVALAAVKANGEYDKI HHHHHHHCCCCEEEECCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHEEEEECCCCHHHH FNKYFGK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]