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The map label for this gene is yeaT [C]

Identifier: 218709529

GI number: 218709529

Start: 1675916

End: 1676371

Strand: Direct

Name: yeaT [C]

Synonym: VS_1538

Alternate gene names: 218709529

Gene position: 1675916-1676371 (Clockwise)

Preceding gene: 218709528

Following gene: 218709530

Centisome position: 50.8

GC content: 43.64

Gene sequence:

>456_bases
ATGCATGGTGGTACGTTGAGCGACGCAAACGTGGTTGCCCGTAAAGTGATGGTTCTTCAACGTATTTTTGTCGCAAGCCC
TGAATTTATTGAGAAACAAGGCAAGCCTTCAAGCCTAAGAGAGCTCACTAATTACCCATTTGTTTGCTTCAGGTGGCCAA
GTGGGGACATCGATAAAGAATGGGACATCAAAGATCACACCATCAAAGTAGAACCTTCGGTCGTCAGTGACAGCATTGGC
TTTGTTAAAGGCGGTGTTATTCGACATAGAGGTATCGCGTTGTTACCAGAACTTTTGGTGCGACATCAACTCAAAGACGG
TAGCTTGATTAACCTATTCCCCGACAACAATCTTCAAAAAGAAGAAGCATGGTTGCTCTACCCTCAGCGTAAAGCGTTAA
GCCATTCAGCACAGCTTTTGATTGATTTTCTATTACAAGAACTTCCAAAACTCTAG

Upstream 100 bases:

>100_bases
TTTAAATTCCAAGATATGTATCCTAAGGTCGAGCTTGATATTCGCAACATTAGTAACGGCTTTGTCGACATGTACCGTCA
AGGGTTAGACCTCGCTCGCT

Downstream 100 bases:

>100_bases
CCATTGTAATGAATATTGTGACAGTGTTTCACGAGCAGGCTAGATTATCCTAACGAAATAGAAAGATAGAATCGCTTCAT
AAATTCAAGAGGAGCAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator LysR Family; Transcriptional Regulator LysR Family Protein; HTH-Type Transcriptional Regulator; LysR Family Regulatory Helix-Turn-Helix Protein; Carbonate Dehydratase; Transcriptional Regulator LysR; LysR-Family Transcriptional Regulator; LysR Family Transcription Regulator Protein; Transcriptional Regulator Lysr Family Protein; Transcriptional Regulator Protein; LysR Family Regulatory Protein; Regulatory Protein LysR

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MHGGTLSDANVVARKVMVLQRIFVASPEFIEKQGKPSSLRELTNYPFVCFRWPSGDIDKEWDIKDHTIKVEPSVVSDSIG
FVKGGVIRHRGIALLPELLVRHQLKDGSLINLFPDNNLQKEEAWLLYPQRKALSHSAQLLIDFLLQELPKL

Sequences:

>Translated_151_residues
MHGGTLSDANVVARKVMVLQRIFVASPEFIEKQGKPSSLRELTNYPFVCFRWPSGDIDKEWDIKDHTIKVEPSVVSDSIG
FVKGGVIRHRGIALLPELLVRHQLKDGSLINLFPDNNLQKEEAWLLYPQRKALSHSAQLLIDFLLQELPKL
>Mature_151_residues
MHGGTLSDANVVARKVMVLQRIFVASPEFIEKQGKPSSLRELTNYPFVCFRWPSGDIDKEWDIKDHTIKVEPSVVSDSIG
FVKGGVIRHRGIALLPELLVRHQLKDGSLINLFPDNNLQKEEAWLLYPQRKALSHSAQLLIDFLLQELPKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17153; Mature: 17153

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGGTLSDANVVARKVMVLQRIFVASPEFIEKQGKPSSLRELTNYPFVCFRWPSGDIDKE
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHCCCEEEEECCCCCCCCC
WDIKDHTIKVEPSVVSDSIGFVKGGVIRHRGIALLPELLVRHQLKDGSLINLFPDNNLQK
CCCCCCEEEECCCHHCCCCCHHCCCHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCC
EEAWLLYPQRKALSHSAQLLIDFLLQELPKL
CCEEEECCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHGGTLSDANVVARKVMVLQRIFVASPEFIEKQGKPSSLRELTNYPFVCFRWPSGDIDKE
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHCCCEEEEECCCCCCCCC
WDIKDHTIKVEPSVVSDSIGFVKGGVIRHRGIALLPELLVRHQLKDGSLINLFPDNNLQK
CCCCCCEEEECCCHHCCCCCHHCCCHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCC
EEAWLLYPQRKALSHSAQLLIDFLLQELPKL
CCEEEECCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA